Chiloscyllium plagiosum (whitespotted bambooshark): 122562085
Help
Entry
122562085 CDS
T08871
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpla01002
]
122562085 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpla04121
]
122562085 (usp43a)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122562085 (usp43a)
Peptidases and inhibitors [BR:
cpla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122562085 (usp43a)
Ubiquitin system [BR:
cpla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122562085 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
122562085
NCBI-ProteinID:
XP_043570525
LinkDB
All DBs
Position
24:complement(23602210..24028658)
Genome browser
AA seq
1247 aa
AA seq
DB search
MASAAPARSTLKGQMNKGKRRKSFSGKLFRRRSLRSVGSFVRGVFKTLFTLAPFGEGTPD
GDGGGGGGGEKQADEEEEEDDGGFRDGAVTLATCSEHREEEEAAAGGKSLSLPRGRERLP
GDKPPGVLGLKNHGNTCFMNAVVQCLSNTELFAEYLGLEQYRSELKQLRANGTLGSKEPV
SHSKAEVTEQLAALVRALWTLEYTPQLSVQFKNIVAKYGSQFRGNSQHDALEFLLWLLNR
VHEDLNCSPNKNSKSSIKPSNVGGETSAGSQQSSQQVGIHSFVQELFQAQYRSSLTCPHC
LKQSNTFDPFLCISLPIPLRQTRALSVTLVFQSKHQKYLRIGLAVPLLGNVATLRKMVAD
EGNITPDQIILTELYTNGFERSFSDEEDLNVIGEGDCVYAFQAPFVRGNCGGTTRQSGRY
QSMTAPSYKAASEGFEATPVEFIQHGATGKVLLLICNSAGTGQQAVRFGPPFLVREDRSL
TWDQLQLCILNKMCCLMRNETHSQNFGHLFRIRVVGGLTTNCYLSPQDIRPLCQPAIDRA
LRSCGLGGPPHIKLVLEWDQKTKDSLFGNIQEEVVQDGESVRIQQQAHQQAHSCTLAECF
ELYTKEEQLAPDDAWRCPHCKNLQQGMVKLNLWTLPDILIIHLKRFRQMGERRTKLSTLV
KFPLSGLDMTPHVAKRTQNTKNFLSHWSPWRRPRFPSGSNHENYLYDLYAVCNHHGSMQG
GHYTAYCRNSVDGQWYDYDDSNAELIPEEEVCTRGAYILFYQKRNTIPPWSANSSVAGST
SSSVSDHWLNRLTGDSKRGSLVSRASTNCTSLPSSPDSPVFPDNPIKDKNGGFEIRPFVR
GIQGRSISMKGSSASSVPKETAGKNAALRWSLGAKDRPQSIPGALVEYLESGRRPKCTKE
SIVPIMTGSTDPDSLPPTDKSKQSNSDCHADCKKQTGKGSTVNQSMAFAGNRIGDASVER
MYDSLKSLRTTHHKENSVDEKSNTLKRNGKQRGSGGTFQRKSSKTATDKSEVVLIKAEEP
IHQRDDRTCTNTGGLSIGSMSSLALSDTLKRKKGHHGSKKLEKSLSLRSSDLEPMSSPNL
RETDKGSKAEETKVNERKFAFLRTNFLKKDSKRQSELEKSWSAKNVNMPSSISLSNGALN
GKHKEESPSESREQLGVNRTKSCAKNRQELNNGRINISGEEIRRSQSSSNIMIKEELTLK
RSSSLQKTGPNSQQARSINVEKYGTLQRMKYSTSSLGRKKPVPESSF
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgcggctccggccaggtccaccctgaagggccagatgaacaagggcaagcgc
aggaagtccttctcgggcaaactgttcaggaggaggtcgctcaggtcggtcggcagcttc
gtgcggggggtcttcaaaactttgttcactttggcacctttcggagaggggacccctgac
ggagatggaggaggtggaggtggaggggagaaacaggcggatgaagaggaggaggaggac
gatggaggcttcagggacggggctgtcaccctggccacttgcagcgagcaccgggaggag
gaggaggcggctgccgggggtaagagcctgagcttgccccggggaagggagcggctgccc
ggggacaaaccccccggggtgctgggcttgaagaaccacggcaatacgtgcttcatgaac
gccgtggtgcagtgcctgagcaacactgagctcttcgccgagtacctgggcttggagcag
taccgctccgagctgaagcagctccgagccaacggcaccctgggcagcaaggagccggtg
tcccactccaaggcagaagtgaccgagcagttggcagcgctggtccgtgctctctggacc
ctcgagtacaccccgcagctctccgtgcagttcaagaacatagtagcaaaatatgggtcc
cagtttcgtgggaattctcagcacgatgcacttgagttccttctgtggttactgaacaga
gtgcatgaagacctcaattgttcacccaacaaaaactcaaaatcttccattaagccttcc
aatgtcgggggtgaaacttctgcaggaagccagcaaagctcacagcaagttggaattcac
agttttgttcaagaactttttcaagcacaatacaggtcatctttaacttgtcctcactgc
cttaagcaaagcaacacatttgatcccttcctgtgtatctccttgccaatccccctccgc
cagaccagggccttgagtgtaaccttggttttccagtctaagcatcaaaagtacttgaga
ataggcctggcagtcccacttcttggaaatgttgctacacttagaaaaatggtggccgat
gaagggaacataacaccagatcagatcattttgacggagctttacacaaatggatttgaa
cgttccttctctgatgaggaagacttgaatgtaattggtgaaggtgactgtgtttatgcg
tttcaggctccatttgtccgaggcaactgtggtggtacaactcgacagtcagggcgttac
cagagtatgactgcaccttcttacaaggcagcttccgaaggctttgaagcaactccagtt
gagttcatacaacatggtgcaactggcaaagtccttcttctcatctgtaactcagcagga
acagggcagcaagctgtcaggtttggtccaccatttttggtaagggaagatcgatcgttg
acctgggatcagctgcagctttgcatcctaaacaaaatgtgctgtctgatgagaaatgag
acccactcgcagaattttgggcatctgttccgaatccgtgtggttggaggactgacaacc
aactgttacctctctcctcaagacattagaccactctgccagccagcaatcgacagggca
ttgcgttcctgtggcctaggtgggcccccacatataaaacttgtcctggaatgggatcaa
aagacgaaagatagcttgtttggaaatattcaggaagaagttgtccaggatggagagagt
gttcggattcaacagcaggcacatcagcaggcacacagctgtacattggccgagtgcttt
gaactatacaccaaggaggaacagttagccccagatgatgcatggcgatgccctcattgt
aaaaatcttcagcaggggatggtcaagcttaatctatggacgctgcctgacattcttata
attcatctgaagcgattccgacagatgggagagagaagaactaaactctctactctggta
aaattcccactaagtggcctcgatatgacacctcatgtagcaaaacgaactcagaacacc
aagaattttttatcccactggtcaccatggcggagaccacgttttccttcaggaagtaat
catgaaaactacttgtatgatttgtatgccgtgtgcaatcaccacgggagcatgcaagga
ggtcactatacagcatactgcagaaactctgtggatgggcagtggtatgattatgatgac
agtaacgcagagctgattccagaagaagaggtttgtactcgtggcgcctacatactcttt
taccaaaaaaggaacaccattcccccttggtcagccaacagttccgtggcaggatccaca
agctcgtctgtctctgatcattggcttaaccggctcaccggagatagtaaacgagggagc
ttggtatcccgtgcatccactaactgtacatccctcccttcatctcctgactctcccgtc
ttcccagataatccaataaaggataaaaatggtggctttgaaatacgaccatttgtgcgt
ggtattcaaggacgaagtattagtatgaaagggtcatctgcttcatctgtacctaaagag
acagctggaaaaaatgcagcattacgttggtcgctgggtgctaaagacagaccacaatca
atccctggtgcgctggttgaatatttggagtctggtcgtagacccaagtgcacaaaggag
tccattgtaccaataatgacaggcagcacagaccctgactctctgccaccaacagataaa
tcaaagcagtcaaattcagattgccatgctgactgcaaaaaacagacaggcaaaggttca
actgtaaaccaaagcatggcttttgcgggaaacaggattggggatgcaagtgttgagaga
atgtatgattctttaaaaagcctccgtactacccatcataaagagaattctgtagacgaa
aagtcaaatacattgaagagaaatggaaagcaaagaggaagcggaggtacttttcagaga
aaatcatctaaaacagcaacggacaaatcagaagttgtacttataaaagcagaagaaccc
atacatcaaagagatgacagaacatgtactaatactggtggactgagtattggctcaatg
agcagcttggctctaagtgacactttgaagagaaagaaaggacaccatggtagcaagaag
cttgaaaagtcactctccttgaggagcagtgatcttgaaccaatgtcatcaccaaatctt
cgagaaacagataaaggtagcaaagcagaagaaacaaaagtcaatgaaagaaagtttgca
tttctgaggacaaactttttgaagaaggactctaaaaggcaaagtgaattggagaaatct
tggtctgccaaaaatgtcaatatgccgtcaagtatatctctctccaatggggctttgaat
ggtaagcacaaagaggagtctccaagcgagagcagggaacaacttggagtgaatagaacc
aaaagctgtgctaaaaacaggcaggaattaaataatggcaggattaatatatcaggggaa
gagattagacgatcacagagttcatccaacataatgatcaaggaggagttgactttgaag
aggtcaagttcacttcagaagactggaccaaactctcaacaggctcgaagcataaatgta
gaaaaatatggtacattgcagaggatgaaatacagcacttcctctcttggaaggaaaaaa
cctgtgcctgaatcaagtttttaa
DBGET
integrated database retrieval system
