Chiloscyllium plagiosum (whitespotted bambooshark): 122562560
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Entry
122562560 CDS
T08871
Symbol
unga
Name
(RefSeq) uracil DNA glycosylase a
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122562560 (unga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpla03400
]
122562560 (unga)
Enzymes [BR:
cpla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
122562560 (unga)
DNA repair and recombination proteins [BR:
cpla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122562560 (unga)
Prokaryotic type
122562560 (unga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
122562560
NCBI-ProteinID:
XP_043571427
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All DBs
Position
25:11090011..11103203
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AA seq
315 aa
AA seq
DB search
MIGQKTIASYFGPAAKKRTLSEASEESVENGKDNYQEEEHNGMRTPVKRLKAGPDGEEAP
VVKPSSPLSPEQLSRIERNKQAALQRLAARNVPPGFGESWKSELLMEFSKPYFIKLMGFI
VSERRRCTVYPPPHEVFTWTEMCNFHDVKVVILGQDPYHGPNQAHGLCFSVKRPVPPPPS
LENMYKELQSDIEGFEPPGHGDLTGWAKQGVLLLNAVLTVRAHNANSHKERGWEDFTDAV
VSCLNDKLDGLVFMLWGAYAQRKGSVINRKRHHVLQTVHPSPLSANRGFFGCKHFSKTNE
LLKKSGKAPINWKLL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggcagaaaactattgcatcttatttcggtcccgcggctaaaaaaagaactttg
tctgaggcttcagaggaaagtgttgagaatgggaaggacaattatcaagaggaggaacac
aatggcatgaggaccccggtcaagaggctgaaggctggcccggacggagaggaagcgccg
gtggtcaagcccagctccccgctcagccccgagcagctgtcccgcatcgagaggaacaaa
caggcggccctgcagagactcgctgcccgcaacgtgcccccgggctttggggagagctgg
aagagcgagctgctgatggagttcagcaaaccgtactttatcaagctgatgggatttata
gtgtcagagaggaggcggtgcacagtttacccaccacctcatgaagtcttcacgtggaca
gagatgtgtaacttccatgatgtgaaggtggttattcttggccaggacccgtaccatgga
ccgaatcaggcccacggactgtgcttcagtgtaaagcgcccagtgccacctccccccagt
ctggaaaacatgtacaaggagcttcagtctgacattgaaggctttgagcccccaggacat
ggtgatctgactggctgggctaagcaaggagtgttgctgctgaatgcagtcctcactgtg
cgagcgcataacgcaaactctcacaaggagcgaggctgggaagatttcaccgatgcagtt
gtgtcttgtctgaatgacaagctggatggtttggtgttcatgctgtggggagcgtacgca
cagcgcaaaggcagtgtaatcaacaggaaacgtcaccacgtactgcagacggttcatcca
tctcctctgtctgcgaaccgaggcttctttggttgtaaacacttctccaaaaccaatgaa
ttgctgaagaaatcggggaaggcacctatcaattggaagttgctgtga
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