Chiloscyllium plagiosum (whitespotted bambooshark): 122563883
Help
Entry
122563883 CDS
T08871
Symbol
pigs
Name
(RefSeq) GPI transamidase component PIG-S
KO
K05291
GPI-anchor transamidase subunit S
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
cpla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
122563883 (pigs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIG-S
Motif
Other DBs
NCBI-GeneID:
122563883
NCBI-ProteinID:
XP_043574024
LinkDB
All DBs
Position
28:2423179..2472606
Genome browser
AA seq
579 aa
AA seq
DB search
MSCHSDSTSVVRGARGKMATVVAMTAAAEEKSRGKYSASCITVIVVLVGLPLWWKTTETY
RASLPYSQISELDILLLDISVPVEVVFTRGTLTAEQQKRLLPQTQFSQKLNQLDGKTGFK
YRYEKTYRAATGIEQDAIMGENVEVTVVTLSRVYESLIGSVVIYVVPADSQLFPQEVTVY
IGKHRAAFLRSPVTRSHTVAEVLQDIDDYVEDILQTMSFTDDMVVAALSSRFPSGTFGTD
TFTDSMTAFKSSLGYEITFSLLNPDPKSHNTCWDIEQAVNNYVQPFLDKMSVFANFSVDS
QILYYAVLGVTPRYNKTSSSFTLNEDSLPHVINPVEAKLGSNVASSYPVLNFLLYVPEYS
HSPLYIRDSDGSPVESNTFHSSRWGGIMIYNVDHQQLNETLLPVSVNIDMARVMEVFLTQ
LRLLLGIQKVQPPSQFLVQSPGNMIATDWEIDRLLWVRTVENIATATNTLTSLAQLLDEI
GNIVINDNIASEVYSALASVQQSLQELEAGRLLSAFQASKKGITSSERAFFDPSLLHLLY
FPDDQKFAIYIPLFLPMCVPIMLSLLKTAKDFKWRKKVD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtcactcagacagtacttccgttgtcaggggagctcgaggcaagatggcgacg
gtggtggcaatgacagcagcggcagaagaaaagtcccgaggaaagtactcagccagctgc
atcactgtgattgtggtattggttggcctgcctctttggtggaagacaacagagacatat
cgtgcctcgctgccttacagtcagatcagtgaactagatattctcttgcttgacattagt
gtaccagtggaggtggtcttcacaagaggcacattgaccgcagaacaacagaaaaggctg
ctgccacagactcagtttagccagaaactgaatcagctggatggtaaaacaggcttcaag
tataggtatgagaagacatatagagctgctaccggtattgaacaagatgcaataatgggt
gaaaatgtggaagtgactgttgtcacgctgtcccgagtttatgagagcttgataggatct
gtggtgatatacgttgtgcctgctgattcccagctttttccgcaagaggtcactgtttac
attgggaaacacagggctgcctttctgcgctcacctgtgactagatctcatactgtggcg
gaggtacttcaggacattgacgactatgtggaagatatcctgcaaacaatgtctttcact
gatgacatggtggttgcagcattgtctagtcgctttccttcaggaacatttggcactgac
accttcacagacagcatgacagcttttaaatctagtcttggatatgaaatcactttcagt
ttgttgaatcctgatcccaaatcccacaacacttgttgggacattgaacaagcagtgaat
aattatgtgcaacccttcctggacaagatgtcagtattcgctaacttttctgttgactct
cagatactgtattatgcagttcttggtgtaacaccacgctacaataagacttcatcaagc
tttactttgaatgaggatagcttgcctcatgtgatcaatccggtcgaagccaaactgggg
tctaacgttgcttcaagctaccctgttttaaattttcttctttacgttcctgaatattca
cattctccactgtatatccgtgacagcgatggatctcccgttgaatcaaacacttttcac
agctcccgctggggaggaatcatgatttacaatgtggatcaccagcaattgaatgagact
ctgctgccagtatcagtcaacatagacatggctcgcgtgatggaggtgtttctgactcag
ctgcggttactgttgggtatacagaaagtacagcccccttctcaattccttgtccaaagt
cctgggaacatgattgccactgactgggaaattgaccgcctgctctgggtgagaacagtg
gaaaatattgccactgcaacaaacacactgacctccttagctcagctcctcgatgaaatt
ggaaacattgtgattaatgataacatcgcctctgaggtgtacagtgccctagcctctgtt
caacaatcgcttcaggagctggaggctggaagactgttgtcagcttttcaggcaagcaaa
aaaggcatcacttcatctgagagagctttctttgatccgtctctcctccacctcctgtac
ttcccagatgatcagaagtttgccatttatatccccttgtttctgccaatgtgtgtcccc
attatgctgtccctgttaaaaactgccaaggattttaaatggagaaagaaggtggattga
DBGET
integrated database retrieval system
