Chiloscyllium plagiosum (whitespotted bambooshark): 122564267
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Entry
122564267 CDS
T08871
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla03013
Nucleocytoplasmic transport
cpla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122564267 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122564267 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpla03019
]
122564267 (nup153)
Messenger RNA biogenesis [BR:
cpla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122564267 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
zf-RanBP
Nup_retrotrp_bd
TackOD1
Motif
Other DBs
NCBI-GeneID:
122564267
NCBI-ProteinID:
XP_043574877
LinkDB
All DBs
Position
29:complement(9544839..9619948)
Genome browser
AA seq
1530 aa
AA seq
DB search
MARKASFCIVTPLPFGESDLDLAMVFVFGGGTGIIAEVSFSLSLDGLQNVRKLLQNPKVS
DLDAVRLVMLYALRYKCHSNSNLASLMEALTRKGVPDKYKLVSVGLVHGQRKLVVISGII
YDKLCLQGIIGRVTSTVKNIVPGWLQKYFGKTSKTEPVEARGSINNHENDPIIVNETPSF
DNGKHQPAPTTSRTAVSTASSKSALNFSEMLLLRPALSRAHINCAALDTPAHDCQPSTSS
SFPIGNSGFSLVKEIKDSGSLHEDDNISTTSGFSSRASDKDVITSRNALPHLWSPDGERS
HSVPQQPAVSLKKPSFNLSAFGSSPPSFISTSLLNSSQLGDSPFYPGKTTYGGAAAAVGR
TSQTRSTPYQVPIRRQMKAKPASSPSYGVTSATARRILQSLEKMSSPLADAKRIPSTVTS
PLSMSLEKSTIDATGWQSKVRKLEAQGPPVQKLQTPVIVSGATNRSVFFKPSLTPGGQSN
RHIDRTENQNNSVKEKSPIPEISLQATKSDSCSYQVISSHATNGLASGGAGGKMKRDKGH
YSSRGAQEVKARAPELPEVSLPIKNTTLPTFNFGSPSTAPSPVISTVTQPFPDKVVVSNP
NNAAFTFSIPNIKATEANLQTISVSTGFTFSEPIDKSVPLVFVSARPSINAVKCTTSPSV
STPTNERKGEDCDGLLKPAKTLKQGSVLDVLKGPEFTSSSSSTQCITKSLDSTPATVKPL
PSTTGRNSSFTESSNTLGFGDKFKPAEGSWKCGSCLLQNKITDSKCVACQTAKSVRPTQT
DESANKDKPAFKETPMSFGDKFKPALGTWSCDTCLVQNKSEAVKCVACDSPKAGTGVKSA
LTLPAVSESTRNRELNPSSSTSVSLGLADQFKKPEGSWKCTVCLLQNKAEDSKCVACQSA
KPGVVPVVANNPVSAPTDGIRGFGDKFKKPAGSWRCEACFIQNSANVTKCIACTTEKTGS
KTDPKGLSASALSTVASPFSIGIQPSTADSLQSKDGAAGFKFGNQGSFKFGTSDSASSTN
AFEGHKFEVTGGFKFGVTSTEKNSEENKKDNSKAPSGGFKFEVAAFGNNSTSIKFGVSDT
SQQSKKSDMALGGFKFGTEEKKETSVLQLQLDKTEERKDGATVSAVLPEKAVDQESVAAK
TFVFGKPDEKQNSLSSTPIAFDKRKDVESQPQSELKKSEQTKESASLSDTSKAESKTGFT
FNLVKPVEKPEATETAQQGFVFGATVNASEQGITKPAFSLFGNSSSMSAAANAGGSTTTS
IFGNSASAPNQPFLFGQASTTVGSANLGNCSESTVAATKPFLFGSQDIKPAVSNSSSGAS
AVAFPFGSTPSSNTATTSVFTFGASTTTSSSTGGSSNSIFGFGSSSTAAANPPAFGTTQT
PVPLFGQSSSQPPAAFASADASTFAFSTSCQQTAFGSQSTSGQPSLFGGQLPNQTPTFGS
TSSTSSNTFQFGNSGHSFNFNATNSSNDVFKFGTASTGATQQPGSSGGFQFNPALGFAVG
VGGTNPFSTTSSGRSTVTGRKIKTAVRRKK
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaaggcctcgttctgcatcgtaacacctctgccattcggtgagtcagatttg
gatctagccatggtgtttgtgtttggaggtgggactgggattattgctgaagtaagtttc
tctctctctctcgatggtttgcagaatgtgaggaagctgctgcagaatcccaaagtgtcg
gacttggatgcagtgaggctggtgatgctctacgctctgcgttacaaatgtcacagcaac
agtaacctggcctcactgatggaggctctgacccgtaagggagtaccagacaagtacaag
ttggtgagtgttggcctcgtgcacggtcaaaggaaattggttgttatatctggcataatt
tatgacaaactttgcttgcagggaatcattggaagagttacaagtacagttaaaaatata
gtacctgggtggctacagaagtactttgggaaaacatctaagacagaaccagttgaagca
agagggtcaataaacaaccatgaaaatgatccaatcatcgtaaatgaaaccccatcattt
gataatggaaagcaccaaccagcaccaacaaccagcaggacagcagtaagcacagcatca
agcaaatctgctttaaatttctcggaaatgcttcttctgcgaccagctctcagtcgagca
cacattaattgtgctgcactagatactccagcgcatgattgccaaccatccacatcctcc
tcttttcctattggcaattcaggattctcactggtaaaggaaatcaaagattctggctcg
ctacatgaagatgataacatctccacaacaagtggtttctcttcccgagcttctgataag
gatgtgataacatcaaggaatgcattaccacatttgtggtccccagacggggagcggtct
cattccgttccccagcaacctgctgtgagcttgaaaaagccatcttttaatttgtctgca
tttggaagttcacctccatcttttattagtacttctttactaaattcaagccagcttggg
gattctcctttctatcctggcaagactacttatggtggggcagcagcagcagtaggaaga
acttctcaaactcgaagtacaccgtatcaggtgccaataaggagacagatgaaagcaaaa
ccagcaagttcaccatcttatggagtgacgagtgctactgccagacgtatccttcaatct
ttagaaaagatgtcaagtcctttagctgatgctaaaagaattccttcaacagtgacatct
ccattgtccatgtccttggagaaaagtaccattgatgcaactggttggcagtccaaagtg
agaaagctggaagcacagggtcctccggtacagaaacttcaaacgcctgtgattgtttca
ggagcaactaatagatccgtatttttcaaaccatctctgacacctggagggcagagtaac
agacatattgacaggacagaaaatcaaaacaatagtgtgaaagagaaatcacctattcct
gaaattagtcttcaagcaacaaaaagtgatagctgttcgtatcaagtcattagttctcac
gcaaccaatggtcttgcatccggaggagctggaggaaaaatgaagagagataaaggacat
tactcctcgagaggtgcacaggaggtaaaggcccgagcccctgaattgcctgaagtatct
ttaccgattaaaaacacaacattgccaaccttcaactttggctctccttccacagctcct
tcacctgtaatatctactgtaacacaaccttttcctgacaaggtagtggtatccaatcca
aataacgctgcctttaccttttctataccaaatataaaagcaactgaggcaaatctgcaa
actatttcagtgtctactggatttacctttagtgaaccgattgacaaatccgtgccactt
gtctttgtatctgccagaccttccattaatgcagtgaaatgcaccacatcgccttctgtt
tctacaccaacaaacgagagaaaaggtgaagattgtgatgggttattgaaacctgctaaa
actctgaagcagggcagtgtcttagatgttttaaaagggcctgagttcacttcgtcgtct
tcatccacacaatgtataaccaagtccttggacagtacaccagctactgtgaaacctttg
ccatcaactactggaagaaatagttccttcacagagagctcaaacaccttaggatttgga
gataagttcaaacctgctgaaggttcctggaagtgtggctcctgccttttacaaaacaaa
atcacagacagtaaatgtgttgcttgtcagactgctaaatctgtacgtcccacacagact
gatgagtcagccaacaaagacaaacctgcatttaaagagactccaatgagttttggagac
aaattcaaacctgcattgggtacatggagctgtgatacctgcttggttcaaaacaaatca
gaagctgtaaagtgtgtagcttgtgattcaccaaaagctggaactggagtaaaatctgca
ctgactttgcctgcagtgagtgaaagtacaaggaacagagagttgaacccttcaagcagt
acctctgtcagtttgggattggcagatcagtttaagaaacctgaaggttcttggaagtgt
actgtatgcctcttacaaaataaggctgaagacagcaagtgtgtggcttgtcagtctgct
aagccaggtgttgtacctgttgttgccaacaatcctgtttcagcaccgacagatggaatt
cgggggtttggtgacaaattcaagaagcctgcaggatcctggcgttgtgaagcctgtttc
attcagaattcagcgaatgtaacaaaatgtattgcttgtacaactgagaaaacaggcagc
aagactgacccgaaaggcctcagcgcatctgcattatcgactgttgcttcaccattcagc
attggaatccagccttcaacagcagactctttgcaaagtaaagatggcgctgctggtttt
aagtttgggaatcagggtagttttaaatttggcacgtcagattctgcttcctcaactaat
gcctttgaaggacataaatttgaggttacagggggtttcaaatttggagttacttcgaca
gaaaaaaattcagaggaaaacaaaaaggataactctaaagcccctagtggtggatttaaa
tttgaggtagctgcctttggtaacaattcaacttcaattaagttcggtgtgtcagataca
agtcaacaaagtaagaaaagtgacatggcgcttggaggttttaaatttggcacagaggag
aagaaagaaacctcggtattgcagttacagctggacaaaacagaagaaagaaaagatggt
gcaactgtgagtgccgttctgcctgaaaaagcagtggatcaggagtctgtggcagcgaaa
acgtttgtatttggaaaaccagatgagaaacagaactctttgagctctacaccaatcgca
tttgataaaaggaaagatgttgaatcgcaaccacagtctgaacttaaaaagtcagagcaa
accaaagaatcagcatctttgtctgacacttcaaaagcagaatctaagaccgggtttact
ttcaacttggttaaacctgttgagaaaccagaggcaactgaaactgcacagcaaggattt
gtgtttggggctactgtaaatgcttcagaacaaggaattacaaaaccagctttcagctta
tttggcaacagttcttccatgtctgctgcagcaaatgctgggggttccacaaccacctcc
atatttggtaattctgcatctgctccaaaccaaccatttttatttggacaagcgagcacc
actgtgggaagtgcaaatcttggaaattgttctgaatcaactgttgctgcaaccaagcca
tttttatttggctcacaggatattaaaccggctgtcagtaattcaagttcaggggcttct
gctgtcgcatttccatttggctcgacacccagtagtaacactgctacaacatctgtgttt
acgtttggtgcttcaaccacaacatctagttcaacaggtggttcctcaaattctatcttt
gggtttggatcaagttctacagctgcagcaaatcctccagcttttggtaccacacagacc
cctgtccctctgtttggacaaagcagcagtcaaccacctgctgcctttgcttcagctgat
gcatctacctttgcattctcaaccagttgccagcaaactgcctttggttcacagtctacc
agtggtcaaccatctctttttggaggacagttacccaatcaaacgcccacatttggttca
acttcatctacctcgagtaacactttccagtttggaaacagtggtcatagttttaatttc
aatgccaccaattcatcaaatgacgtttttaaatttggaactgcttctacgggagcaaca
cagcagcctggatccagtggtggcttccagttcaacccagcccttggattcgctgttggg
gttggcggcaccaatcctttttctacgacatctagtggccgttcaactgttactggtcgg
aagataaagactgcagttaggcgcaagaagtag
DBGET
integrated database retrieval system
