Chiloscyllium plagiosum (whitespotted bambooshark): 122565446
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Entry
122565446 CDS
T08871
Name
(RefSeq) neurocan core protein-like
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
hEGF
V-set
Sushi
Ig_3
I-set
EGF_CA
Motif
Other DBs
NCBI-GeneID:
122565446
NCBI-ProteinID:
XP_043577370
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All DBs
Position
31:complement(39107209..39359050)
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AA seq
1734 aa
AA seq
DB search
MLIVPLHIGWLCLCLASAASLHETAPIGDDEKIVNIKKVQHLPVVRGLSDSALLPCVFSV
LPSSAIDPSLLPDPPRIKWTKVLLDGGSRKEIPVLVAKNNTVKLNPAYQGRASLPGYGPY
HYNASLEIVSLQASDTGIYQCEVVVGIDDEQDTVPLEVLGVVFHYRAASNRYSLTFEAAS
QACLDNSARIASPHELLAAFQDGFDHCDAGWVSDQTVRYPIRSPRPGCYGDKFEYPGIRT
YGIRDPSEQYDVYCYIKELKGNVFHETTTLKLNLTEAMHQCQMQGAQLATAGQLYMAWNQ
GFDQCDAGWLADGSVRYPINIPRRNCGGDMPGVRTVYQLPNRTGFPDAGSKYDAYCFRAG
DVQPSTKQRVNLEGASPFENSERLIPQLSAAQGGDESSNTVTPISGKLSFKEWPLLSGTE
LTELSKQVEEPPSHNLTVTQQTVQEHLERHTPTADSEQPHFSGKDSSLSIHPEEHNLSPT
ASSNLAPVNSRNSSGNLLDVLNELDISEGSGLDYSGDHFDNSTRGMTLASYASPTVTAEG
PKEEVSHNSSDLIQASPALVALDVVTSAFNPEEKANATQGQTSEREPTQQPESTTLNRAS
PGISTPSASSDSDGFNLQAVTVSLLAKEMKSDIVVIGESNELPPPGPEPMSKNELDTDWE
FLGKQFLKSKATEVMTIELSNQQLDNLPIIEPETTESIIKDTTVVTERVLTSASQASLYI
PTPSHIVTDPKAWLQVVTGQPRRESSSVHLTNEKDGEQVITPLSGNDQDGSKFKRAHEEL
WLLDRQSHKTEKPSSTETTEITTVRNEESDSSTQELESSRNIATVTNNSSTSTVGRTYLE
MVTEASGDVIPREDKEYLSAVTKHTNIYRKLGIYGQHQEGNNSQSSNISNKAWEEQTAVS
LLLPNISKNRIPPEENRTTGSDEGEKPLAVVGVTHGLKALQPHIVTDHPGGEFSERSSVP
VRPTTGYVGLLQEGAGTLATGDLGGSGDGETIFLNQHQTGSDAAENHSGTPSGHESDPEE
RQTSADSVPDPLKASEEELQERTLAFEGHVNSLTQPTPHSTALIDTSVPKDNEEHLTEET
ELTYLIMPERETESLNGLDGSQPLGKQMPSTVQSSVVNTTDGNETSSQPPTKKLMASNEI
EQTMNKLSETEREDIMSVTGASGIGLLLHGEKFPEAHRDHSKSVTFASGSAVLATTSTEV
GQGPLHSTTSNVVRNTEIVLTSVTGTVDRKEGTGVSGLSPTAKSTAHVVKETEEAIPAVT
VSSITQDSHAELELPRTVAITAEQSMVPTVLGTVGLAEEELQRLERPERAGEDTAFTESP
ALFTSIPFPTPLHNLNLSHHESTTVDDSMEHMIPSVPHDAETLPSETWISSPYEEADGSG
AAEQMLVTTDQMAEDPTGSALEQEKESSAVTPSIVSLNDLDEELVFPITEGSNPCQTNPC
LHEGTCVSNRTVYTCNCVPGFTGENCEIDIDECQSSPCENGATCVDGINSFTCLCLPSYA
GRLCEEDTEGCDHNWQKFLGHCYRYFSHRRLWENAEKDCRGHGAHLVSIHSAEEKEFLNS
LGREYTWIGLNDRTIEEDFQWTDGSSLQYENWRENQPDSFFAGGEDCVVTIKHENGKWND
VPCNYNLPYICKKGTVLCGPPPVLEHAVTLGRKKARYEIHSLVRYQCEDGLIQRHIPTIK
CHSNGKWDKPKILCLNPTSGNRRSRRHQHKSSRKDKRKHKRNLDLHQLDMKPFY
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgctaatcgtgcctcttcatattggctggctctgtctgtgcttggcttctgctgcatct
ctacacgagacagcacccataggggacgatgagaagatagtgaacataaagaaggtccaa
cacctgccggtggtcaggggattatcagactcagcactccttccctgtgtcttctccgtg
cttccaagctcggccatcgacccttcattgctccctgaccccccgcgcatcaagtggact
aaagtcttgctcgacggtggtagccggaaggaaatccctgtgctggtggccaagaacaac
acggtgaagttaaacccggcctatcagggccgtgccagtctgcctggctatggcccctac
cactacaatgccagcctcgagattgtctctctgcaagcaagcgacacaggcatctaccag
tgtgaagtggttgtggggattgatgatgagcaagacacagtgcctctagaggtcctgggg
gtggtgttccattaccgtgctgccagcaacaggtactccctcacctttgaggctgcctca
caggcctgtctggacaactcagcgaggatcgccagtccccacgaactattggctgctttt
caggacggcttcgaccactgcgatgctggttgggtttctgatcaaactgtccgatacccg
attaggtcaccaaggcctggttgctatggagataaatttgaataccctggcatcagaacg
tatggaattcgagatcctagtgagcagtatgatgtctactgttatatcaaagaacttaaa
ggcaatgtatttcatgagacgaccactctgaaattgaacctgactgaggctatgcatcaa
tgccagatgcagggagctcaactagcaactgctggccaactgtacatggcctggaatcag
ggcttcgatcagtgtgacgctggctggctggcagatggcagtgtgcgttaccccattaac
attcctcgaagaaactgcggcggagatatgccgggtgtcaggacggtttaccaactccca
aacaggacggggtttcctgatgctgggtcaaagtatgatgcctactgtttcagagctggt
gatgtacagccatccacaaagcaaagggtgaatcttgaaggagcttctccatttgaaaat
tcagagcgactgatcccacaactgtccgcggcacagggaggggacgaaagttcaaacaca
gtgacgcctatttcaggcaagctgtccttcaaagaatggcccttactctctgggactgaa
ctcactgagctgtcaaagcaagtggaggaaccaccatcccataatctcactgtcacacag
cagacagtgcaggaacatctggagcgacacaccccaacagctgattcagagcagccccat
ttctctggaaaagactcttcactctccattcacccagaggaacacaacttaagcccaact
gcctccagcaatttagccccagtcaacagcaggaactcttctggtaatctgcttgatgtg
ttaaatgagctggacatttctgaaggaagtggactggactatagtggtgaccactttgat
aactcaaccaggggaatgaccttggctagttatgcaagcccaaccgtgacagctgagggg
ccaaaggaggaagtatctcacaattccagtgacctgattcaagcaagcccagctctcgta
gcacttgacgttgtgaccagtgcatttaatccagaagagaaagccaatgcaacacaaggt
caaacatctgaaagagagccaacacaacagccagagtccactactctcaacagagcgtct
cctggcatttcaacgccttcagcttcctcagattcagatggattcaatctgcaagctgtt
actgtgagtttattggctaaagagatgaaatcggacattgttgttattggtgaatccaat
gagttgcctccaccagggccagagcctatgtccaaaaatgagcttgacactgactgggag
ttcttagggaaacaattcttgaaaagcaaggcaactgaagttatgactattgaactttcc
aaccagcaacttgataatctacccatcatcgaacctgaaacaactgagagcattattaaa
gacacaactgtagttacagagcgagtcttaaccagtgcatcacaagcgtcgttgtatatt
ccaactccttctcacattgtgactgatccaaaggcatggctgcaagttgtcacagggcaa
cctagaagagaaagttcctctgtccacctcaccaatgagaaggatggggagcaagtcatc
acaccgctcagtgggaatgatcaggatggttcaaaattcaaaagggctcatgaggagctt
tggctgctagacagacaaagtcataaaaccgagaagccatcttcgacagaaacaactgaa
ataaccacagtcagaaacgaagagagcgattcttcaacccaagagttggaaagttccaga
aatattgccacagtgacaaacaactcaagcaccagtactgtaggtagaacttacttagaa
atggtcactgaagcttctggagatgtgattcccagagaggataaagaatatctttcagca
gtgactaagcacacaaatatttataggaaattgggaatctatggtcaacaccaagaagga
aataattctcaatcatcaaatattagcaacaaggcatgggaagagcaaactgctgtttca
ttgctgctaccaaacatcagcaagaacagaattcctcctgaggagaacagaactacaggc
agtgatgagggtgagaagccattggctgtggtaggtgttacacatgggctgaaggccctt
cagcctcacattgtcacagatcacccgggtggagaattctctgagcggtcctcagttcca
gtgagacccacgacagggtatgtaggcctccttcaagagggagctggcaccttggcaact
ggtgaccttggaggaagtggcgatggagaaacgattttcctaaaccagcaccagaccggt
tcagatgctgcagaaaatcattcaggaactccatctggacatgagagtgatccagaagaa
agacagacttcagcagacagtgtgccagaccccctcaaagcttctgaggaggaactccaa
gagaggacattggcttttgagggacatgttaacagtttgacccagcccactccacattcc
acagcactcattgacacctcagtgccaaaagacaatgaagaacatctgacagaagaaaca
gagctgacatatttaataatgccagagagggagacagagtccctgaatgggttggatgga
agtcagccacttggcaaacaaatgcccagcactgttcagtcttctgtagtgaatacaaca
gatggaaatgaaacaagcagtcagccacctacaaagaaactgatggcttcaaatgaaatt
gagcaaacaatgaataaactgtctgaaacagaaagagaagatattatgtcagtgacgggt
gcctcaggaattggattattattacacggagaaaaattccctgaggcccacagagaccac
tcaaaatcagtaacatttgcttctggcagtgcagtgcttgctactacatctactgaggta
ggacaggggccattacactcaacaacgtcaaatgttgttaggaatacagagatagtgttg
acaagtgtaacaggaacggttgacaggaaagaaggcacaggagtatctggcctgagtcca
acagccaagtcaactgcacacgttgtcaaggaaactgaggaagcaatacctgcagttaca
gtctcatccattactcaagattcacacgcagaattggagcttcccagaacagtagccatc
acagcagaacagtcaatggtgcccactgtcttaggcacagtcgggttagcagaggaagaa
ttgcagagattggagaggccagagagagctggtgaagacactgctttcacagaaagccct
gcgctgttcacttccattccttttcccaccccgttgcacaatctgaacttatctcatcat
gaatccacaactgttgatgatagcatggagcacatgattccgtctgtgcctcacgatgct
gaaactctgccctcagaaacatggatatcttcaccatatgaagaagctgatggatcgggg
gcagcagagcagatgttagtcaccactgaccaaatggctgaagatccgaccgggtcagcc
ttggagcaagagaaagaaagttcagcagtaactccatccattgttagcctcaatgacttg
gacgaagaactggtctttccaataacagaggggtcaaacccttgccagacaaacccgtgc
ctacatgagggaacctgtgtatccaacaggaccgtctacacctgcaactgtgttccggga
tttactggagaaaactgtgagatagatattgatgagtgtcaatccagtccctgtgaaaat
ggcgcaacctgtgtcgatggaatcaattccttcacttgtctctgtttaccgagctacgct
ggcaggttgtgtgaggaagatacggagggatgtgaccacaactggcagaagttcctgggc
cattgctatcgatacttctcacacaggcgcctgtgggagaacgcagagaaggattgccga
ggacatggggcacatcttgtcagcattcattcagctgaggagaaggagttcttaaacagt
ctgggtcgggagtacacttggattggcctgaatgataggacgattgaggaggatttccaa
tggactgatggctcttcattgcaatatgaaaactggagggaaaatcagccggacagtttc
tttgctggaggagaggactgtgtggtcactatcaaacacgaaaatgggaagtggaatgat
gtaccgtgtaactataacctgccctacatctgtaagaagggaacagtgctatgtggtcca
cccccagttttggaacatgctgtgacacttggaaggaagaaagctcgttacgagatccac
tcactggtcaggtatcagtgtgaggatggtcttatccaacgtcacatcccgaccatcaaa
tgtcacagcaatggcaagtgggacaagccgaaaatcctctgtcttaaccccacatccggt
aaccgcagatcacgaaggcatcagcataaatccagcaggaaagacaagcgaaagcacaaa
aggaacctggacttgcatcaactggatatgaaacccttttactga
DBGET
integrated database retrieval system
