Cavia porcellus (domestic guinea pig): 100725149
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Entry
100725149 CDS
T07777
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-15
KO
K16494
protocadherin beta
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoc04515
]
100725149
Cell adhesion molecules [BR:
cpoc04515
]
Cadherins
Protocadherins
100725149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
100725149
NCBI-ProteinID:
XP_023416254
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MKAGGGRKERQVLILFLLLGVALAGWDAGRYFVLEETESSSFVADLIKDLGLGVEELAQR
GARVASEDNEPRLHLDQQTGKLLLNEKLDREELCGPADPCVMHFQVLLKKPLEVFRAELL
VGDINDHSPEFPEKEMTLKISENSPPGTVFLLKKAQDLDVGINNIQNYNISPNFHFHVSI
RNQGDDRKHPELVLDKELDREEQSEFRLTLTALDGGSPPRSGTAKIRVLVMDVNDNAPAF
AQTLYEVQVPENTPLGTLIVKVSARDLDIGTNAEISYSLYSSQEIGKTFELSSSSGEVRL
IKLLDFETIPSYELDIEASDGGGLSGKCSVSIKVLDVNDNSPEITISSLISSIPENSPET
EVALFKTRDRDSGENGKMVCSIQDDIPFALKPSVENFYRLVTEGALDRETTAQYNITITV
TDLGTPRLKTQHTITVLVSDVNDNAPTFTQSSYTLSVPENNSPALHIGSVSATDSDSGTN
AQLTYSLLPPPHDPLPGLASLVSINADTGQLFALRALDYEAFXAFEFPGARHRSRGRPPL
SGQARVRVRVLDANDNAPFVLHPLQNASAPCTELLPRAAQPGYLLTKVVAVDADAGQNAW
LSFQLLQASEPGLFSVWAHSGEVRTARPPGERDAPRQRLLVLVRDNGQPPLSASVTLHVL
LVDGFSQPHLPGPEAAAERAQADPLTGPLVVALASVSSLFLCWLLLFVALRLCGRSGRAA
LPGCPAPEGPFPGQLLDVSRAGTLAHSYQYEVCLTGDSQDNEFQFLKPAFPNILGKDSGR
KSDGNPNFQNNLGM
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccggagggggacgcaaagaaaggcaagttctgattctctttctcttactggga
gtggctctagcaggctgggatgccggtcgctattttgtgctggaggaaacagaaagcagc
tcttttgtggctgatctcatcaaggatctagggctgggagtagaggagctggctcagcgg
ggagcccgggtggcctctgaggataatgaaccacgcctgcatctcgatcaacagaccggg
aaattgttattaaatgagaagctggaccgggaggagctgtgcggtcctgcggatccctgt
gtaatgcatttccaagtgctactgaaaaagccactggaagtattccgagctgagttactt
gtaggagatataaatgatcattctccagagtttcctgaaaaagagatgactctgaaaatc
tcagagaatagccctcctggaactgtgtttcttttgaaaaaagctcaggatttggacgtg
ggcatcaacaatattcaaaactacaatattagccccaactttcatttccatgtttccatc
cgcaatcagggagatgacaggaagcacccagagctggtgctggacaaagaactggaccgc
gaggagcagagtgagttcagattaaccctgacagcgctggatggcggctctcctccgcga
tctggcactgccaaaatccgtgtcttggtcatggacgtcaatgacaacgccccagcattt
gcacagacactctatgaggtacaggtaccagagaacacacctttagggactctcattgtt
aaagtttctgctagggatttagatattggaacaaatgcagagatatcatactccctttat
agttcccaagagataggtaaaacgtttgaactaagcagcagttcaggagaagttcgacta
attaaattactagattttgagacaataccgtcatatgaactagatatagaggcatccgac
ggcggggggctttctggaaaatgttctgtttctattaaagtattggatgttaacgataat
tccccagaaataactatttcatcacttatcagttctattcctgaaaattccccagagaca
gaggtggctctgtttaagacccgagaccgagactctggggaaaatggaaaaatggtttgt
tccatccaggatgatattccctttgcgctgaaaccttctgtagagaatttctacaggctc
gtaacagaaggagctctcgacagagagaccacagcccagtacaacatcaccatcacagtc
accgacctggggacgcccaggctgaaaacccagcacaccatcaccgtgctggtctccgac
gtcaacgacaacgcccccaccttcacccaaagctcctacaccctctcggtgcccgagaac
aacagccccgccctgcacatcggcagcgtcagcgccacagactcagactcgggcaccaac
gcccagctcacctactcgctgctgccgccgccccacgacccgctcccgggcctcgcctcg
ctcgtgtccatcaacgccgacaccggccagctgttcgcgctgcgggcgttggactacgag
gccttcnncgccttcgagtttcccggtgcgcgccaccgatcgcgggggcggcccccgctc
agcggccaagcgcgcgtgcgcgtgcgcgtgctggacgccaacgacaacgcgcccttcgtg
ctgcacccgctgcagaacgcgtccgcgccctgcaccgagctgctgccccgcgccgcccag
cccggatacctgctcaccaaggtggtggcggtggacgccgacgcgggccagaacgcctgg
ctgtccttccagctgctgcaggccagcgagcccgggctgttcagcgtgtgggcgcacagc
ggcgaggtgcgcaccgccaggccgccgggcgagcgcgacgcgcccaggcagcggctgctc
gtgctggtcagggacaacggccagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccgcacctgcctgggcccgaggcggcggccgagcgcgcg
caggccgacccgctcaccggccccctggtggtggcgctggcctcggtgtcgtcgctcttt
ctgtgctggctgctgctcttcgtggcgctgaggctgtgcgggaggagcgggcgggccgcg
ctgcctggctgccctgcgcccgagggcccctttccgggccagctgctggacgtcagcagg
gcgggcacgctggcccacagctaccagtatgaggtgtgtctcactggagactctcaagat
aatgagttccaattcttgaagccggccttccccaatattttgggcaaggattctgggaga
aaatcagatggtaacccaaattttcagaataatttaggtatgtga
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