Crocodylus porosus (Australian saltwater crocodile): 109307198
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Entry
109307198 CDS
T07440
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04510
Focal adhesion
cpoo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109307198 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109307198 (LAMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Alanine_zipper
PBECR1
Motif
Other DBs
NCBI-GeneID:
109307198
NCBI-ProteinID:
XP_019386511
Ensembl:
ENSCPRG00005013900
LinkDB
All DBs
Position
Unknown
AA seq
1596 aa
AA seq
DB search
MSAGLGGALAALAALLALAGAAMDECAEEQSGRAQRCMPEFVNAAFNRSVAATNTCGSPA
EEYCVQTGVTGVTKSCHLCDAAQPHLRHGAAFLTDYNNQADTTWWQSQTMLAGVQYPSTI
NLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTKEDGPWIPYQYYSGSCENTYQKINRGF
IRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVSL
NRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECMKNEFGKLSCVCKHNTFG
VDCEKCLPFYNDRPWRRATAESASECLPCNCNGRSQECYFDPELYRSTGHGGHCVGCLDN
TDGANCERCRENFYRLGSEEACLPCNCNPVGSLSTQCDNYGRCSCKSGVMGDKCDRCRPG
FHSLSEAGCRPCSCNTAGSTDDCSIETGRCTCKDNVEGFNCERCKPGFFNLDPANPRGCN
PCFCFGHSSVCTNAIGYSVYSITSNFQFGEDEWRAEQRDGSEILLQWSAETQDISVTSDS
YFPIYFVAPGKFLGNQVLSYGQNLTFSFRVDRRDTRLSAEDLVLEGADFRVSVPLIAQGN
SYPSENTLKYTFRLHEATDYPWRPALTSFEFQKLLHNLTSIKIRGTYSERNAGYLDDVTI
VSARPGPGAPAAWVESCTCPAGYEGQICEHCAPGYRRETPSLGPYSSCVLCTCNGHSETC
DPETGACDCRHNTAGPHCEKCSEGYYGDATAGTSSDCQPCPCPGGSTCAVVPKTKEVVCT
NCPSGVTGKRCELCDDGYFGDPLSEYGAGRPCRLCQCNDNVDPNAVGNCNRQTGECLKCI
YNTAGFYCDRCKVGFFGNPLAPNPESKCKACSCNRYGTVKQQTSCSQVTGQCECLPHVIE
RDCSACEPGFYNLQSGQGCERCDCHALGSTNGQCDIQTGQCECQPGITGQRCERCEVNHF
GFGPEGCKPCDCDPEGSRALQCKEDGRCECKEGFVGNRCDQCEENYFYNRSWPGCQECPA
CYRLVKDKVAEQRQKLQELENLIANLGTGEETVTDQAFEDRLKEVEREVMDLLEDAQSSK
DVDQDLMDRLRHINSTLASQLNRLRNIQSTVQETDSLAKQARERVQDTEDLIEIASNMLE
KAQMAVANVSISPTETSSDSNNMTVLAGEARELAERHKQEADEIVRVAKAANDTSTEAYQ
LLLKTLAGGNQTAKDIDELNRKYNQAKNISRDLEKQASKVLAEAEEAGNKALQIYANLTS
LPAVDSRSLENEANKIKKEAEELDHLIDRKLKDYEDLREDMKGKELEVKNLLEKGKTEQQ
TADQLLARADAAKALAEEAAKKGNNTLQEANNILSNLRDFDKRVNDNKTAAEEALKKIPA
ITQTIAEANNKTRQAELALGNAAADAREAKNKADDAEKIANSVQKNAASTKSDADKTFSD
VTELAREVDDMMKRLQDAEKELKMKQEDANQDMMLAGMASQAAQEAEDNARKAKNSVNNL
LTIINELLDQLGQLDTVDLNKLNEIEGTLNSAKDQMKDSELDRKVSFLEKEARKQDDAIQ
AYNRDIEEILKDINNLEDIKKTLPSGCFNTPSIEKP
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgggctcggcggggcgctggccgcattggccgcgctgctggcgctggcgggc
gccgccatggacgagtgcgcggaggagcagagcgggcgggcgcagcgctgcatgcccgag
ttcgtcaacgccgccttcaaccgcagcgtggcggccaccaacacgtgcggctcgccggcc
gaggagtactgcgtgcagaccggcgtcaccggggtcaccaagtcctgccacctgtgcgac
gccgcccagccccacctgcgccacggcgccgccttcctcaccgactacaacaaccaggcc
gacaccacctggtggcagagccagaccatgctggccggggtgcagtaccccagcaccatc
aacctcaccctgcacctcggaaaggcctttgacattacatatgtgcgcctgaagtttcat
accagtcggcctgagagctttgccatctacaagcgcacaaaggaggatgggccatggata
ccttaccagtattatagcggttcctgtgaaaatacatatcagaaaattaacagagggttt
atccggactggggaggatgagcagcaggcactctgcacagatgagttcagtgacatctct
cctctcacggggggtaatgtggctttttcaacattggaggggcgacccagtgcctacaac
tttgataacagtcctgtgttacaggaatgggtgacggctactgacatcagagtgtccctt
aatcgcctgaacacctttggagatgaagtttttaatgacccaaaagtgctcaagtcttat
tattatgcaatttctgattttgctgtaggtggcaggtgtaaatgtaatggccatgcaagc
gagtgtatgaagaatgagtttgggaagctgtcttgtgtctgcaaacacaatacatttggg
gtagactgtgagaagtgccttcctttctacaatgaccggccatggagaagagcaacagca
gaaagtgccagtgaatgcttgccctgtaactgcaatgggcggtctcaggaatgttatttt
gatcctgagctgtaccgttctacgggtcatggtggccattgtgtaggctgcttggataac
actgatggggccaactgtgaaaggtgccgggaaaacttctaccgccttggaagcgaggaa
gcatgtctcccatgtaactgtaaccctgttggctccctcagcacacagtgtgataattat
ggtcgctgcagctgcaaatctggtgtaatgggtgataaatgtgatcgatgccggccaggg
ttccactctctctcagaggctgggtgcaggccgtgttcttgtaatactgctggtagcaca
gatgactgcagcattgaaacagggcgctgtacctgcaaggacaatgtggagggattcaac
tgtgagagatgtaaacctgggtttttcaatctggatccagcaaatcctaggggctgtaac
ccttgtttctgttttggacactcctcagtctgcacgaatgccattggctacagtgtctac
agcatcacctccaacttccagtttggtgaggatgagtggcgtgctgaacaacgagatggc
tctgaaatattactccagtggagtgctgagacccaggacatctcagttacctcagacagc
tatttccctatctattttgttgcaccaggcaagttcttgggtaaccaggttttgagttat
ggtcaaaaccttaccttctccttcagagtagatcggagggacacccgtctgtctgcagag
gacctggtgcttgaaggggctgactttagagtgtctgtgcctcttattgctcagggcaac
tcttatcccagtgagaacacactgaaatacaccttcagacttcatgaggcaacagattac
ccatggagaccagctcttacctcttttgagtttcaaaaactgcttcacaacttgacttct
atcaagatccgtggaacgtacagtgagagaaatgctggctacctggatgatgtcacaatt
gtgagcgctcgtccagggcctggagccccagcagcatgggtggagagctgtacctgccca
gcaggatatgaaggacaaatttgtgagcactgtgccccaggttacaggagggagactcct
agccttgggccatacagttcgtgtgtactgtgcacctgtaatgggcacagtgagacatgt
gatccagagactggtgcatgtgactgcaggcataacacagcaggtcctcactgtgaaaag
tgcagtgaaggatattatggtgatgcaactgcaggcacttcctctgactgtcagccatgt
ccgtgtccaggaggctcaacctgtgccgtagtgcctaagacaaaagaggtggtatgcacg
aattgtccttctggtgtcacaggtaaaaggtgtgagttatgtgatgatggctattttgga
gaccctcttagtgaatatggtgctggaaggccttgccgtctctgccagtgcaatgacaac
gttgatcccaatgccgtgggaaactgtaacagacaaacaggtgaatgcctgaaatgcatc
tacaacacagctggcttctactgtgaccgctgcaaagttgggttctttgggaacccctta
gctccaaaccctgagagcaagtgcaaagcttgcagttgtaatcgttatggcacggtgaaa
caacagacaagctgcagtcaagtaactggacagtgtgagtgcctgccacatgtcatagag
agggactgtagtgcctgtgagcctggcttttacaacctccagagtggacagggctgtgag
aggtgtgactgtcatgcactgggttccactaatggtcagtgtgacatacagaccgggcag
tgtgaatgtcagccaggcatcactggtcagcgctgtgagagatgtgaggtcaaccacttt
ggatttggaccagaaggctgcaaaccatgcgactgtgatcctgagggttctcgcgctctg
cagtgcaaggaagatggtcgctgtgagtgtaaggaaggcttcgtggggaaccgttgtgac
cagtgtgaagagaactatttctacaatcggtcttggcctggctgtcaggagtgccctgca
tgctacaggctagtgaaagataaggtggcggaacaaagacagaagttgcaagaactggaa
aatcttatagcaaacctaggtacaggagaagaaactgtgacagaccaggcctttgaggac
aggctgaaggaggtagagagagaggtcatggatttgcttgaagatgcacagagcagcaaa
gatgtggatcaagatctgatggatcgtcttaggcacattaacagcactctggcaagccag
ctcaacagattacggaacatccagagcacagtgcaagaaacagatagccttgctaagcaa
gctcgtgaacgagtgcaggatactgaggacctgattgaaatagcttccaacatgctagag
aaggcacaaatggcagttgccaatgtgtccattagcccgacagagacaagcagtgactct
aacaacatgactgtcttggcaggagaggcccgtgaattggctgaacgacacaagcaagaa
gctgatgagattgtgcgtgtagccaaggcagcaaatgatacatcaacagaggcatatcaa
ctgctgttgaagacactggctggagggaaccaaacagcaaaagatattgatgagcttaac
aggaagtataatcaggcaaagaacatttcccgagaccttgaaaaacaggccagtaaagtt
ctggcagaggcagaggaagctgggaataaggcccttcagatctatgctaatctcaccagt
ctacctgcagtggattccaggagtctagagaatgaggcaaataagatcaagaaggaagca
gaggagctggatcacctaattgacaggaagttgaaagactatgaagatttgagagaggat
atgaaagggaaggagctggaagtgaagaacctcttagaaaaaggaaaaactgagcaacag
actgcagaccagctcttggcccgagcagatgctgccaaagctctggctgaagaagctgcc
aagaaaggcaataacacgctacaagaagccaacaacattctcagcaacctgagagatttc
gataagcgtgtgaacgataacaagacagcagctgaggaggcattgaaaaagattcctgcc
attacccagacgattgctgaagccaacaataagacacggcaagcagagctagcacttggc
aatgctgctgctgatgctagggaagccaagaacaaagcagatgatgctgagaaaattgct
aattctgtccagaagaatgctgccagcacaaaatctgatgccgacaagactttctctgat
gtgacagaactggccagagaagtagatgacatgatgaaacggcttcaagatgcagagaaa
gagctgaagatgaagcaggaagatgccaaccaggatatgatgttggcagggatggcttca
caggctgcccaagaggcagaagacaatgcaagaaaagcaaagaactcggtgaataacttg
cttaccatcattaatgaacttctggatcaactaggacaactggacacagtggacttgaat
aaactgaatgagattgagggtacactgaacagtgccaaagatcagatgaaagatagtgag
cttgatcgaaaagtgtctttcctggagaaggaagccaggaagcaagacgatgccattcag
gcttacaacagggacattgaagaaatcctgaaagacattaacaatctggaagacattaag
aagacattgccatctggttgtttcaacaccccgtccattgaaaaaccctaa
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integrated database retrieval system