Crocodylus porosus (Australian saltwater crocodile): 109311127
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Entry
109311127 CDS
T07440
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109311127 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109311127 (MBD4)
03400 DNA repair and recombination proteins [BR:
cpoo03400
]
109311127 (MBD4)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
109311127 (MBD4)
DNA repair and recombination proteins [BR:
cpoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109311127 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
109311127
NCBI-ProteinID:
XP_019392104
Ensembl:
ENSCPRG00005012600
UniProt:
A0A7M4F1K1
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MAAPEVGEQGKGSDQSDMQTKDEGNQLVTETEEHFDSQIEGTETIAENSLLRKEDAAVVS
EVVVACHKVVPNGWEKITKQRKSGKTAGKYDVYFISPEGMKLRSKRALVEYFHKTGETGF
KPQDFDFTAPAQSNTKVRAKKCSAKAVKTAMQKKELNNTKQEFSAQNGKGGGSVQLLQTV
DEEQENISFTSTQGTEDLVIKECKPKDDSLALKENGITEKRVQIKKARKRSEKKNPGCTQ
NKRQRKVSCNKQEVEINKSKTFQRKNNACASDSGGAGDQNSNDVDTGKCGGDLGNALTSG
SQSEVNLGPVLAHSEEALGTTVELACSERSSVDIATKDSEENSAESEFGQGKDEMLFQSQ
DFTSNAQTEISSSQPCGKKNLTSVKLLKEDYGPRTQVDRRKTSPYFSSKYNKEAPSPPRR
KAFRKWTPPRSPFNLVQEILFHDPWKLLIATIFLNKTSGKMAIPALWEFLEKYPSPEVTR
TADWKEMSELLKPLGLYELRAKTIIKFSDEYLSKRWKYPIELHGIGKYGNDSYRIFCVNE
WKEVRPQDHKLNIYHAWLWENYDKLSLD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccggaagtaggggagcaaggaaagggcagtgaccaaagtgacatgcaaaca
aaagatgaaggaaaccaattagtgacagagacagaagaacattttgattcacaaatcgaa
ggtactgagaccatagcagagaacagtctcctgcgtaaagaagatgcagctgttgtctct
gaagtggttgttgcatgtcacaaagtcgttccaaatggatgggagaagatcacaaagcaa
agaaaatcaggcaaaactgcaggaaaatatgatgtttattttatcagtcctgaaggaatg
aagttaagatccaaacgtgcacttgtagagtattttcataaaactggagaaactggtttt
aaaccacaagattttgattttactgctcctgctcaaagtaataccaaggtgagagccaaa
aaatgcagtgcaaaagctgtgaaaaccgcaatgcagaaaaaggaacttaacaatacaaaa
caagagtttagtgcgcaaaatggtaaaggcggtggtagtgttcagttacttcagactgtt
gatgaagaacaggaaaacatttctttcacgtccacccaaggaacagaagacttggtcatt
aaagaatgtaaaccaaaggatgattctttggcgcttaaagaaaatgggataactgaaaaa
agagttcaaattaagaaagctagaaaaaggtcagaaaaaaagaatccaggttgtacccag
aacaaaagacagagaaaagtatcatgtaataaacaagaagttgaaataaataaaagcaaa
acattccagagaaagaataatgcttgtgcttctgatagtggcggagctggtgatcagaac
tcaaatgatgtggatacaggaaaatgtgggggagacttgggaaacgcactgacttcaggc
tcccaatcagaggtgaatctcggaccagtcttagctcactcagaagaggcattaggaacc
acagtggagttagcctgctcagagaggagttctgttgatatagctacaaaagactctgag
gaaaactctgcagaatcagaatttgggcaagggaaggatgaaatgctttttcagagccag
gacttcacatctaatgctcaaacagaaatcagcagttcacagccttgtggcaagaaaaat
ttgacatcagttaaattgctgaaagaagattatggcccaagaacacaggtggacagaagg
aaaaccagcccgtatttttccagtaaatacaataaagaagctccaagcccacctaggcgg
aaggccttcagaaaatggactcctcctcggtctccttttaatttggtccaagaaatactc
tttcatgatccctggaaactcctcattgcaaccatatttctcaacaaaacttcaggtaaa
atggcaatccctgcactctgggagtttctggagaaatacccttcccctgaagtcacaaga
acagctgactggaaggaaatgtcagagttgcttaaacctcttggcctctatgaactgaga
gcgaagaccattatcaagttttcagatgagtatctgagcaagcgatggaagtaccctatt
gaactgcatggaattggaaaatatggaaatgattcctacagaatcttttgtgttaatgag
tggaaggaggtacgcccacaagatcacaaattaaatatatatcatgcctggctctgggaa
aattatgacaaactgagtcttgattga
DBGET
integrated database retrieval system
