Crocodylus porosus (Australian saltwater crocodile): 109314000
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Entry
109314000 CDS
T07440
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03320
PPAR signaling pathway
cpoo04148
Efferocytosis
cpoo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109314000
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
109314000
03320 PPAR signaling pathway
109314000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoo03000
]
109314000
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cpoo03310
]
109314000
Transcription factors [BR:
cpoo03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
109314000
Nuclear receptors [BR:
cpoo03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
109314000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
DUF6021
Motif
Other DBs
NCBI-GeneID:
109314000
NCBI-ProteinID:
XP_019396452
Ensembl:
ENSCPRG00005007680
UniProt:
A0A7M4EJJ2
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMAAPSLHPSIGPGIGSSLGSAGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPNLGFGTGSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREGMEHHPSRPTRLLGRQEEQAVQEERQRGKDRN
ENEVESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQL
FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNS
AHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKV
YASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE
APHQMT
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacatttcctgccactggatttctccaaccaagtcaattccacctccctg
aactccccaaccagccgggggcccatggctgcaccttccctccatccatccatcgggccg
gggatcggctcctcgctgggctcagcgggccagctccactcccccattagcaccctcagc
tcccccatcaatggcatgggcccacctttctccgtcatcagctcccccatggggcctcac
tctatgtcagtcccctcaacccccaacctggggttcggaaccggcagcccacagctcaat
tctccaatgaaccctgtcagcagctcagaagacattaaaccgcccttggggctcaatggg
gtccttaaagtgccagcacacccctcaggaaccatggcctccttcaccaagcacatatgt
gccatctgcggggaccgatcttcaggtaaacattacggcgtgtacagctgcgagggctgc
aaaggtttcttcaagcgtacggtgcggaaagacctcacctacacctgccgtgacaacaag
gactgcctgatcgacaagcgccagcgcaaccgctgccaatactgccgctatcagaagtgt
ctggccatgggcatgaagcgagaagggatggagcatcatccatcccggcccacaagactt
ctgggaaggcaggaagaacaagctgtgcaagaggagaggcagagggggaaagatcgcaac
gagaacgaggtggagtcgacaagcagcgccaacgaggacatgcccgtggagaagatcttg
gaagccgaacttgcggtggagccaaagacagagacgtacattgaagcaaacatgggcttg
acccccagctcgcccaacgacccggtaaccaacatatgccaagcagcggacaaacagctc
ttcaccttggtggaatgggcaaagagaatcccccacttctcggagctgccgctggatgac
caggtcattttgctcagagcaggctggaacgaactgctcattgcctccttctcccaccgc
tcgatagctgtgaaagacgggatcctcctagctaccggcctccacgtccatcggaacagc
gcgcacagcgcaggggtcggtgccatctttgacagagtactgacagaactcgtgtcaaaa
atgcgggacatgcagatggacaagacagagctgggctgcctgcgggccatcgttctcttc
aacccggattcaaaaggtctctccaaccccgctgaggtggaggccttgcgtgagaaggta
tacgcgtcactagaggcatactgcaaacacaaataccctgaccagcctggaaggtttgca
aaactcttgctccgtctccctgccctccgatccattggcctgaaatgcctggagcacctg
ttcttcttcaagctaataggagatacacccatcgacaccttcttgatggaaatgctggaa
gcaccccaccaaatgacttaa
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