Crocodylus porosus (Australian saltwater crocodile): 109317755
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Entry
109317755 CDS
T07440
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoo03000
]
109317755 (SOX13)
Transcription factors [BR:
cpoo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109317755 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109317755
NCBI-ProteinID:
XP_019402151
Ensembl:
ENSCPRG00005011019
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MSMRNPISPHPDLDGAGNMVNCTIKTEEKESCYESPKGAAAGPGSHASSLHGAPPSLSDT
TDPRALPQESPSPGSDAVDTKSSTFEPAVGIQEKLDFNRNLKEVMPTIEKLLSSDWKERL
LGRNNMESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQ
MELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQSLPVAPDSQL
ALPIQPIPCKPASLSAVEYPVQLLHSPPPPSLKRPTSSSHLQMQESSQPLNLTAKPKGPE
LPSASSSPSLKMGSCQSLTPNHGATRDLQSSPSNLPLGFLGEGDAITKAIQDARQLLHGH
SGALEGSLSNPYRVKDHIGADSSPAKERVEETCAHRLDEAMITCDMDGSRHFPESRNNNH
IKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQ
HLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGFLIAPQSSQMQATSSD
VLYPRPVGLQLTPPLMEHYLPRGTDPNMPVIINTRSLKAQEADGAEDRHSVADGEMYRYS
EEEDSEGEDKSDGELVVLTD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggaaccccatctctccccatccggacctcgatggagccggcaacatggtg
aactgcaccatcaagacagaggagaaggagagctgctacgagtccccaaagggagcagct
gccggccccgggtcccatgccagcagcttgcacggagcgccgccgtcactgagcgacacc
actgacccccgggccctgccacaggaatccccgtcccccgggagcgacgcagtagacacc
aagagctccacgttcgagcctgccgtgggcatccaggaaaagttggacttcaatagaaac
ttgaaggaggttatgccaaccattgagaagttactctccagtgactggaaggaaaggctt
ttgggaagaaataacatggaatccaaagaggtgaaaggtacccaggagagcctagcggag
aaggagctgcagttacttgtcatgatcaaccagctctccacgctgagggaccagctcctg
acagcccactcagagcagaagaacatggcagccatgctctttgagaagcagcagcagcag
atggagctggcccggcagcagcaggaacagattgccaagcagcaacaacagctcattcag
cagcagcacaagattaacctgctgcagcagcagatccagcaggtcaacatgccctatgtc
atgatcccagcctttcctcccagccatcagtcactcccagtggctccagactcccagcta
gcacttcccatccagcccatcccttgcaaaccagcttctctttctgcagtggagtaccca
gtgcagctcctacacagccctcctccgccgtcactcaaaagacccaccagctccagccac
ctccagatgcaggagtcttcacagcccctgaacctaacggccaagcccaaaggccctgag
ctccccagtgcttccagctctcccagcctgaagatgggcagctgccagtccctcacgccg
aatcatggggccacgcgggacctgcagtccagcccttccaacctgcccctggggtttctg
ggagagggggacgccattaccaaagccatccaggatgcccggcagctcctgcacggccac
agcggggccttggagggctctctgagcaacccctacagagtgaaggaccacatcggagcg
gactcctccccggctaaagagcgggtggaagagacctgtgcacacaggctggacgaggcc
atgataacctgtgacatggacggctcacggcacttccccgagtccaggaacaacaaccac
atcaagcggcccatgaacgctttcatggtctgggccaaggacgagcggcggaagatcctg
caggctttcccagatatgcacaactccagtatcagcaagatcctggggtcccggtggaag
tccatgacgaaccaggagaagcagccctattacgaggagcaggcacggctgagccggcag
cacctggagaagtacccagactacaagtacaagccgcgacccaagcgcacctgcatcgtg
gagggcaagcgacttcgcgtgggcgagtacaaggccttgatgaggaaccggaggcaggat
gccaggcagggcttcttgatagcaccccaaagcagccagatgcaagccacctcctcagat
gtcctgtacccgaggccagtgggtttgcagctgacgccaccgctgatggagcactacctg
ccccgcggcacagaccccaacatgcccgtcatcatcaacacacgcagcctcaaagcccag
gaggctgacggcgcggaggacaggcactcagtcgcggatggcgagatgtaccggtacagc
gaggaggaggactccgagggcgaggacaagagcgatggggagctagtggtgctgacggac
tga
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