Crocodylus porosus (Australian saltwater crocodile): 109320029
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Entry
109320029 CDS
T07440
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04520
Adherens junction
cpoo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109320029 (AFDN)
04530 Tight junction
109320029 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
PDZ_2
ASPP1-2_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
109320029
NCBI-ProteinID:
XP_019405473
Ensembl:
ENSCPRG00005017449
LinkDB
All DBs
Position
Unknown
AA seq
1881 aa
AA seq
DB search
MRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEE
RRLDIDEKPLVVQLNWNKDDREGRFVLKNENDTLPPKKAQSNGPEKQEKEGVIQNFKRTL
SKKEKKEKKRREKEALRQASDKDDRPFHGDDIENSRLAAEVYKDMPETSFTRTISNPEVV
MKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEA
LEKYGLEKENPKDYCIARVMLPPGSQHSDDKGAKEIILDDDECPLQIFREWPSDKGILVF
QLKRRPPDYIPKKSKKQTDGKPLKGKERVDGSGYGSCLPPEKLPYLVELSPGRRNHFAYY
NYHTYEDGSDSRDKPKLYRLQLSVTEVGTEKFDDSSIQLFGPGIQPHHCDLTNMDGVVTV
TPRSIDAETYVEGQRISETTMLQSGMKVQFGSSHVFKFVDPSQDHIIPKRPLDAAGLMVK
GPRHKTGVVQETTFDLEGDVHSGTALPASKSTNRLDGDRTSSASSTAERGMVKPMIRVEQ
QQEYRRQDGRSQDTHGPELVLPASIEFRESSEDAFLSAIINYTNSSTVHFKLSPTYVLYM
TCRYVLSSQYRPDITPTERTHKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMA
NASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDENNPQ
RPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYW
GAIIRQQLGHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSHDDIPHINSTCFKLNS
LQLQALLQNYHCASDEPFIPTELIDKVVAVAENTADELARSDGREVQLEEDPDLQLPFLL
PEDGYSCDVVRNIPNGLQEFLDPLCQRGFCRLTPHPRSPGTWTIYFEGADYESHLLRENA
ELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAG
DQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSD
RRGAGKPRPKSEGFELYNNSAQNGSPESPQLPWTEYNEPKKLPGDDRLMKNRADHRSSPN
VANQPPSPGGKNAYASGTTTKITSVSTGNLCTEEQTPPARPEAYPIPTQTYTREYFTFPA
SKSQDRMGPAQNQWPNYEEKTQVQAESSHSISAAMQRVARSQEELRDKVFQPERNRLEVV
IRKDVEYIDRKSDSDPWMNSSVDSSTSSQEHLNHSSKPISPGSCLTKSGPGRWKTPATSQ
PTPVAVSQPIRTDLPPPPPPPPVHYAAEFDELQMDLPLPPPPPPNQLGTPASSQVAAAER
KKREEHQRWYEKEKARLEEERERKRREQERKLGQMRAQPLIPSQPMVPPVSVQQVKPEKP
STLQRSQETVIRELQPQQQPRTIERRDLQYITISKEELSSSDSLSPDPWKRDAKEKLEKQ
QQMHIVDMLSKEIQDLQNKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDD
VDTMLIMQRLEAERRARQTAVPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERR
RQEEERTKREAEEKRRQEEGYYSRLEAERRRQHDEADRRLLESDEPGLYRPPLPREYELP
PPTLSSNAPPPPPQRNTSYLKTQVLSPDTLYTAKFVAYNDDDEEEDSNLAGQDKYSSTRK
SYGDLPPATLKPQQPSRQPHPVSDGIFLSNSFQPPSVNANSTITKTSQPPPPPHKPSFFH
PSSSKGPNSYTGSTGATVGAQELYRDPREKRSRSQDIDVPGAPENLTFRERQRLFSQGQD
VSNKVKASRKLMELENELNTK
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgagattttattttcaagataaagcagctggaaattttgcaacaaaatgtatccgtgtg
tctagtaccgctacaacacaagatgtaatagaaactttggcagagaaattccgacctgac
atgcgaatgttgtcatcccctaaatactcactttatgaagtacatgtcagtggagaagaa
agaagattagatatagatgagaagccccttgttgtacagttgaattggaacaaagatgac
agagaagggaggtttgttctcaagaatgaaaatgatacacttcctccaaagaaagctcag
agtaatggccctgaaaaacaagaaaaagaaggggttatccagaacttcaaacgaacgcta
tcaaaaaaagagaaaaaagaaaaaaagaggcgagaaaaggaagcactgcgacaagcatca
gataaagatgatagacctttccatggagatgatattgagaattctcgtcttgcagcagag
gtttacaaagatatgcccgagaccagcttcacacgcacaatatccaatcctgaggtagtc
atgaaacgccgacgacagcaaaaactggagaagaggatgcaggaattccgcagctctgat
ggccggccagactcaggagggacactcagaatttatgcggacagcttaaaaccaaatata
ccatacaagacaatcctgctgtctactacagatactgcagactttgcagttattgaagct
ctggagaagtatggtttggaaaaagaaaatccgaaggattactgtattgctcgtgttatg
cttccacctggttctcaacattcggatgataaaggtgctaaagaaattatccttgatgat
gatgagtgccctcttcagatattcagggaatggcctagtgacaaaggaattttagtgttt
cagttgaaaagacgtcctcctgactatatcccaaagaaatccaagaaacaaactgatgga
aagccattaaaggggaaggaaagagttgatgggtctggctatggctcttgccttcctcct
gagaaactaccatatctggtagaattaagcccagggagaaggaatcactttgcctactac
aactatcacacttatgaagatggttctgactccagagataagccaaagctttatcgtcta
caattaagcgttactgaagttggaacagaaaaatttgatgacagttctatccagttgttt
ggtccaggaattcagccacaccattgtgacctcaccaatatggatggagttgttactgtt
accccaagaagcattgatgctgagacttatgtggaaggtcagcgtatttcggagaccact
atgctgcagagtggcatgaaagttcagtttgggtcttctcatgtatttaaatttgtggat
cccagtcaggatcatattattcctaaaaggcctttggatgctgctggtctcatggtcaaa
ggtccaagacacaaaactggagttgttcaggaaacaacctttgatctggagggagatgtt
cacagtggaacagcattaccagcaagcaagagcaccaacagactggatggtgacagaaca
tcatcggcatccagcacagctgaacggggcatggtgaagccaatgatcagagtagagcaa
caacaagagtaccgcagacaggatgggagatctcaggacacgcatgggccagaactcgta
ttacctgcaagcatcgaatttagggaaagttctgaagatgccttcttatctgccattata
aattataccaatagttcaacagttcattttaaactatctcctacttacgttttgtacatg
acttgtcggtatgtattgtcaagccagtacagacctgacatcactcctactgagcgcact
cacaaagtcattgcaatagtcaacaagatggtgagcatgatggaaggagttatccaggag
gtagaccaggttgatcagaagcaaaagaatattgctggggcacttgccttctggatggca
aatgcatctgagctgctcaattttataaagcaagaccgagatctcagccgaattacttta
gatgcacaagatgttttggcacatttggttcaaatggctttcaaatacctggttcactgt
cttcagtcagagcttaacaactacatgcctgcattccttgatgatgaaaataatcctcaa
aggcctaaaatagatgatgtcttgcatacgttaactggagctatgtccctgttgcgacga
tgtagagtgaatgctgcgctaactatacaactcttctcccagctgtttcattttatcaac
atgtggctttttaatagacttgttactgatccagattcaggattgtgctcgcattactgg
ggagccatcattcgccagcagttgggccatattgaggcctgggcggaaaagcagggccta
gaactggctgctgattgtcacctaagcaggatagtgcaggctactacactgctaaccatg
gataagtactcacatgatgacattccacatattaacagtacctgctttaagttgaattcc
ctacagttacaagcactgttgcagaattatcactgtgcttcagatgaaccatttatccca
acagagcttatagataaggtagtagctgtcgcagaaaatacagctgatgaactagctcgt
agcgatggcagagaagttcagctggaagaggatcctgatctacagctgccttttcttctg
ccagaagatggctattcatgtgacgttgtcagaaacattccaaacggtttacaagaattt
ttagatccgctgtgccagagaggcttctgcaggttaacacctcatccacgttcaccaggg
acttggacaatatattttgaaggtgcagactatgaaagtcacctgttgcgtgagaatgct
gagctggctcagcctttgaggaaagaacctgaaatcatcacggtgacactaaaaaaacaa
aatggaatgggcttaagcattgttgctgctaagggtgcaggtcaagataaacttggaatc
tatgtcaaatctgttgtaaaaggaggtgctgcagatgtggatggtcgcctggcagcaggg
gatcaactgctcagtgtggatggtagaagtttggtggggctgtcccaagaaagggcagca
gaactcatgacaagaacaggttctgtagtgaccctggaagtagcaaagcaaggagcaatt
tatcatggtctggcaaccctgcttaaccaaccatccccaatgatgcagagagtttctgac
cggcgtggcgcaggtaaaccccgaccaaagagtgaaggcttcgagctgtataataactct
gctcaaaatgggtcacctgagagccctcagctgccttggacagagtacaatgaaccaaag
aagcttccaggggacgacagattaatgaagaatcgagctgatcaccgctccagtccgaat
gtggcaaatcagcctcccagtcctggaggaaagaatgcttatgcttctggaacaaccacc
aagataacttcagtctctactggaaatctttgtacagaggaacagacaccgccagcaaga
cctgaagcttatcctattcccacacaaacctacaccagagagtatttcacattcccagct
tccaagtctcaagatcgaatgggtcctgctcagaatcagtggccaaattatgaagaaaaa
acacaagtccaggcagagagtagtcactcaatcagtgctgcaatgcagcgtgtggctcgt
tctcaggaagaactgcgagataaagttttccagccagagaggaatcgtttggaagtggtt
atacggaaggatgtggagtacattgatcgcaagtcagacagtgatccgtggatgaattca
tctgtggattccagcacatctagccaagagcatctgaaccattcatccaaacctatttcc
cctggttcgtgtttaactaaaagtggacctggccggtggaaaactccagctaccagccag
ccgacccctgtggcagtttcccagcccattagaacagacctacccccaccaccaccacct
ccaccagtgcattatgcagctgaatttgatgaactgcaaatggatttgcctcttccacct
cctccccctccaaaccagctaggaacaccagcatcttcccaggtagctgctgcagaacgt
aaaaagagagaggaacatcagcgatggtatgaaaaagaaaaggcacgtttggaggaagaa
cgagagaggaaacggcgtgagcaggagaggaaactgggccagatgcgggctcagccacta
attccttctcagcctatggttcctcctgtttctgttcagcaggtaaaaccagaaaagcct
tcaacattgcagaggtcccaagaaactgtcattcgagagttacagccccaacagcaaccc
cgaaccattgagcgaagagatctgcagtacattaccatcagcaaagaagaactatcttcc
agtgatagcttgtctcctgatccctggaaacgggatgcaaaggagaagctggagaagcag
caacagatgcacattgtggacatgctgagcaaagagattcaggatcttcagaacaagcct
gatcgcacagcagaggagaatgaccgcctacgcaaactcatgcttgagtggcagttccaa
aaacgacttcaggagtcaaagcaaaaggatgaagacgatgaagaagaagaagatgatgat
gtggataccatgctaattatgcagcggcttgaggctgaaagaagagcaaggcagactgct
gtgccagcaatctctgttctagatttgttacaggatgaggagcgccgacgacagcagcag
ttggaagagatgcgtaaacgagaagcagaagatagggccaggcaagaagaggagcgccgg
cgacaggaggaggagcgaaccaagagagaggctgaagaaaagaggcgacaggaagaaggg
tattacagtcgcttggaagctgaaaggcgcaggcagcatgatgaggcagaccgaagatta
ctggaatctgatgagcctggtctgtacagacctccacttccacgggaatatgagctccca
cccccaaccctttcatctaatgctcctcctcccccacctcagcgaaacacctcttacctc
aaaacacaggtcctctcccctgacacgctttatactgccaagtttgttgcatacaatgat
gatgatgaggaggaggattccaatctagcaggtcaggataagtactccagcacaagaaaa
tcttatggtgaccttcctcctgccacccttaagccacagcagccctcccgccagccgcac
ccagtttcagatggcatctttctttccaactcattccagccaccctctgtcaatgccaac
agtactatcaccaaaacaagtcagcccccacccccaccacacaaaccaagtttcttccat
cccagcagctcgaaaggaccaaattcttacactggatctacaggggcaactgttggagcc
caggaactttatcgggatccaagagaaaaaagatctagaagtcaagatattgatgtacct
ggagcaccagagaacctgacgttcagagaacgccaacgtcttttctcacagggccaggat
gtatccaataaagtaaaggcttctaggaaattaatggaactggaaaatgaactaaacaca
aaataa
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