Citrobacter portucalensis: FOB25_11975
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Entry
FOB25_11975 CDS
T06238
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cpot
Citrobacter portucalensis
Pathway
cpot00540
Lipopolysaccharide biosynthesis
cpot01100
Metabolic pathways
cpot01250
Biosynthesis of nucleotide sugars
Module
cpot_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FOB25_11975 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cpot01005
]
FOB25_11975 (rfaD)
Enzymes [BR:
cpot01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FOB25_11975 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cpot01005
]
Core region
FOB25_11975 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QET57099
LinkDB
All DBs
Position
complement(2533280..2534212)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGETPKLFEGSENFKRDFVYVGDVAAVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGSIEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaagccctgaat
gataaaggtatcaccgacatcctggtggtggacaacctgaaagacggcaccaagtttgtt
aacctggtggatctgaatattgctgactacatggacaaggaagacttcctgatccagatt
atggccggggaagatttcggtgatatcgaagcgattttccacgaaggcgcatgctcttcc
accaccgagtgggacggcaagtatatgatggacaacaactatcaatactccaaagagctg
ctgcactactgcctggagcgtgaaatcccgttcctgtacgcgtcctctgccgccacctac
ggcggtcgcacttctgatttcatcgaatcccgtgaatatgagaaaccgctgaacgtctac
ggctactcaaaattcctgttcgacgagtacgtgcgtcagatcctgccagaagccaattct
cagattgttggcttccgctatttcaacgtctacggaccgcgtgaaggccacaaaggcagc
atggcaagcgttgctttccacctcaacacccagcttaacaatggtgaaacaccaaaactg
ttcgaaggcagtgaaaacttcaaacgtgatttcgtttacgtaggcgacgtagctgcggta
aacctgtggttcctggaaaacggggtttccggcatctttaacctcggtacaggtcgtgcg
gaatctttccaggcggttgccgatgctacgctggcgtaccacaaaaaaggcagcattgag
tacattccattcccggaaaaactgaaaggccgctaccaggcatttacccaggcagatctg
acgaacctgcgcgcagcgggctatgacaagccgtttaaaaccgtcgccgaaggcgtcacg
gaatatatggcctggctgaaccgcgacgcgtaa
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