Corynebacterium provencense: Csp1_10140
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Entry
Csp1_10140 CDS
T06939
Symbol
deaD_2
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cpre
Corynebacterium provencense
Pathway
cpre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Csp1_10140 (deaD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpre03019
]
Csp1_10140 (deaD_2)
03009 Ribosome biogenesis [BR:
cpre03009
]
Csp1_10140 (deaD_2)
Enzymes [BR:
cpre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Csp1_10140 (deaD_2)
Messenger RNA biogenesis [BR:
cpre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Csp1_10140 (deaD_2)
Ribosome biogenesis [BR:
cpre03009
]
Prokaryotic type
rRNA helicases
Csp1_10140 (deaD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
UvrA_inter
HEM4
adh_short
TetR_C_19
Motif
Other DBs
NCBI-ProteinID:
AWT25820
UniProt:
A0A2Z3YRR0
LinkDB
All DBs
Position
1147820..1150180
Genome browser
AA seq
786 aa
AA seq
DB search
MFESLLSSPARMVKAMTDTENVSGDENQPDTSQSTVPQNNLLETPVETTPGVGDIVGADD
SENTADRDVTEENPAEDNHDDGHRPVDDDASTGTTGNAGSAGGTDEDAGTAGAASDAKSA
TDAEPADEDDTEDEGSGFAGLGLPDRVLEAVRKVGYVTPSPIQAATIPALMKGRDVVGLA
QTGTGKTAAFALPALSRLDLDERYPQVLVLAPTRELALQSADAFETFAEHLGNMSILPIY
GGAPYGAQLSGLRRGAQIIVGTPGRIIDHLEKGSLDLSRLRFLVLDEADEMLNMGFQEDV
ERILSDTPDSRQVALFSATMPSAIRRLSRQYLHDAEEYTVKSEQRTNDNISQDFLMVSHR
NKLDALTRILEVTEFDAMILFVRTKSDTEELAEKLRGRGFDAAAINGDIAQNQRERTVDQ
LKDGRLDILVATDVAARGLDVDRITHVFNYDIPRDTESYVHRIGRTGRAGRTGRAILFVT
PRERRLLKNIERATKSHLREIDLPSVDQVNEARKAKFFSSLTDALKDRQMDTFRELVTSY
SQDNDVPMTDVAAALAAKLQGKEPFYTQEIREPQRRERRGREDGDHGRENSGVFRPFSER
FSREAPKVTDRSGKDLAVYRVSVGHRQRVRPGAIVGALANEGGLNSRDFGRISIFSEHSL
VELPADLPREVFEQLDQTRISGKLINIEPDPGAPAGRPGSSRRDRDDRGGDRGGDRRGGR
GRDRDDRGGRGERQSDRGRFDRDRGNRDHGSREHGGRSSWRGNRNDRYDRGDREDRGGFR
GRRERS
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgaatcgcttttgtcctccccggcacgtatggtgaaggcaatgactgacactgag
aacgtctccggcgacgaaaaccagccggacacctcccagtcgacggttcctcagaacaat
ctgctcgagaccccggtggagaccaccccgggcgtcggtgacattgtgggcgcagatgat
tccgagaacaccgcggacagggatgtcaccgaagagaatcctgcagaagacaaccatgac
gacgggcaccggcccgtggacgacgatgcatctaccggcaccaccggtaacgccgggagt
gccggcggcaccgacgaggacgccggaacggccggggccgcgtcggacgcgaaaagtgcg
acggacgcagaacctgcggacgaggacgacacagaggacgaggggtcgggcttcgccgga
ctgggtctgcccgaccgtgttctcgaggctgtgaggaaggtcgggtatgtcaccccgtcc
ccgatccaggccgccacgatccccgcgctgatgaaaggccgggacgttgtcggtctggcg
cagaccggcaccggcaagaccgcagctttcgcactgcccgcactgtcccgtctcgacctc
gacgagcgctacccccaggtactcgtcctggcgccgacccgggagctggcactgcagtcc
gccgacgcattcgagacttttgcggagcatctcggcaacatgagcatcctgccgatctac
ggcggggcaccctacggcgcccagctgtccggtctgcgtcgcggggcccagatcatcgtg
ggtactccgggcaggatcatcgaccacctcgagaaggggagcctcgacctgtcccggctg
cggttccttgtcctggacgaggccgacgagatgctgaacatgggtttccaggaggatgtc
gagcgcattctctccgacacgcctgattcacgtcaggtcgcgttgttctccgcgacgatg
ccctccgccatccgcaggctgtcccggcagtacctgcatgacgccgaggaatacacggtc
aagtccgagcagcggaccaacgacaacatctcgcaggacttcctgatggtgtcgcaccgt
aacaagcttgatgcgctgacccggatcctggaggtcacggagttcgacgcgatgatcctc
ttcgtgaggaccaagagtgacaccgaggagctcgccgagaaactgcgcgggagaggtttc
gacgccgccgcgatcaacggtgacatcgcccagaatcagcgtgagcgtaccgtcgaccag
ctcaaggacggtcgtctcgacattcttgtggccaccgacgtggctgcccgcggtctcgac
gtcgaccggatcacccatgtgttcaactacgacattccccgcgacacggaatcctatgtg
caccgtatcggccgtaccgggcgtgccggtcgcaccggccgggcgatcctcttcgtgacc
ccgcgggaacgtcgtctgctgaagaacatcgagcgtgcgacgaaatcgcacctcagagag
atcgatctgccgagcgtcgaccaggtcaacgaggcccgtaaggcgaagttcttctcgtcg
ctcaccgacgcgctcaaggacaggcagatggacaccttccgcgagctggtgacctcctat
tcgcaggacaatgacgttcccatgacggacgtcgccgctgctctggcagccaagctgcag
ggtaaggaaccgttctacacccaggagatccgcgagccccagcgtcgtgagcgccgtggt
cgtgaggacggggaccacggcagggagaactcgggtgtcttccgcccgttctcggagcgg
ttcagccgtgaggcgccgaaggtcaccgaccgcagcggtaaggacctcgccgtctaccgg
gtcagcgtcggtcaccgtcagcgcgtccgcccgggtgccatcgtcggcgccctggcgaac
gaaggcgggctgaactcgcgggacttcggcaggatcagcatcttctccgagcattccctt
gtcgagctgcccgccgaccttccccgggaggtgttcgagcagcttgaccagacccggatc
tccggaaagctcatcaacatcgagccggacccgggggctcccgccggtaggccgggcagc
agtcgccgtgaccgcgacgaccgtggcggtgacaggggcggcgaccggcgtggtggtcgt
ggccgtgaccgcgacgaccggggtgggcgcggtgagcgtcagtcagaccgtggacgtttc
gaccgtgaccggggtaaccgcgaccacggtagccgcgagcacggcgggcgcagcagctgg
cgtgggaaccgcaacgaccgttacgaccggggtgaccgtgaggaccgtggcggcttccgg
ggacgccgggagcgcagctga
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