Colwellia psychrerythraea: CPS_2428
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Entry
CPS_2428 CDS
T00258
Name
(RefSeq) ABC transporter, ATP-binding/permease protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
cps
Colwellia psychrerythraea
Pathway
cps02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CPS_2428
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cps02000
]
CPS_2428
02044 Secretion system [BR:
cps02044
]
CPS_2428
Transporters [BR:
cps02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CPS_2428
Secretion system [BR:
cps02044
]
Type I secretion system
Adhesin protein transporter
CPS_2428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_16
IgaA
Alpha-amyl_C
Motif
Other DBs
NCBI-ProteinID:
AAZ25494
UniProt:
Q481X4
LinkDB
All DBs
Position
2540197..2542254
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AA seq
685 aa
AA seq
DB search
MNNHNDLKVALIALLQQLGLHSQANSISVDTRLDKLDTTELLDVLRKYSLNFHVRPMNKK
DIDHTLLPFLVIPQEDEAFVSRRKNNQYEQLTSEQSWQRVSFRKDFEQAKVIIIENLPTK
KSSSKTFSQHLSKQKKWYKPVFWLSLLSSLTGLAVPLFTMSVYDRVIGGQAPDVLPQIAL
GAFIALAILIGSRLIRAKIVASASNKFARDLSDITFSRLLRMPLMVLSRVGLSNHIARMR
NAEKVRGMVSGPGGAGLIDLPFTIIAFSAIALLSGWLVLVPIIMLFVYYLVMKLLNRYTA
RVVPTINSEYQNSINELSKNVLQLKASGQTEARRVEFFRQCRESCRQNFLFAKRNGLKTA
TAHALSMLTALATVFTGIFLVLNQSITAGALIACVMLIWRITGPAQLAFSSGQKFTMMSG
AIQQFDRFMGASPEQNEYRMEQPDRETAPTIKINQITLRYSANQEPVLSGVSADIESGDC
VAVIGPNACGKTSLLLSLLGVVEPQAGFIMVNNKNLKQYDPETFREYAGYCPAEPDLFPG
TLADNLRIAKPDATDEELIAALKHAGGESLFIALNSNLNIMLENNASNMLSAVEGSYINL
ARAFLKKSNFIILDEPLANRNPQARKAFSNTILALKGKATIVFSSHDPELIKLADKVIVL
DKGSVVYAGPIPEKNSQEMESSNHE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcataatgaccttaaagttgcattaatcgcactattgcaacagttaggtttg
cactctcaagcgaatagcatttctgtagacacgcggctagataaattagataccactgaa
ctcttagatgttttaagaaaatacagtcttaattttcatgtgcggccaatgaacaaaaag
gatatagaccatacgttattaccttttttggttattcctcaagaagatgaggcttttgtt
tcacgacgtaaaaataatcaatatgagcagttaacgagtgaacagtcttggcaacgggtt
tcttttaggaaagattttgagcaggcaaaagtcattattatagaaaacctgccaactaag
aaatcttcaagtaaaaccttttcacagcatttatcaaaacaaaagaaatggtataaacca
gtattttggctgagtttgttatcaagtttaacgggattagcagtacctttatttactatg
tctgtttatgacagagtcattggtggacaagcacccgatgtactacctcaaatagcctta
ggcgcctttatcgccttagccatattaattggcagtcggcttattagagccaaaatagtg
gccagtgctagtaataagtttgcgcgtgacttatcagatataacctttagtagactatta
agaatgccgctgatggtattgtctcgcgttggtctgtcaaatcacatcgcaagaatgaga
aatgcggaaaaagtaagaggcatggtttcaggacccggtggtgcagggttaatcgattta
cccttcaccatcattgctttttcagccattgccttgttaagtggctggttagtcttagtc
cctattattatgctgtttgtctattacttagtgatgaagttactgaatcgctataccgca
cgtgtagtgccgaccataaacagtgaatatcaaaactctattaatgagttatctaaaaat
gtgttgcaacttaaagccagtggacaaactgaagcacgaagagttgagttttttaggcag
tgtcgagaatcttgtagacaaaacttccttttcgcaaaacgtaacggattaaaaacggct
acggctcatgcattgagtatgcttacggcgttagcgactgtatttacggggatcttctta
gtcttaaatcaaagcattaccgctggtgctttaatcgcctgtgtgatgttgatttggcga
attaccggacctgctcaattagctttttcatcagggcaaaaattcaccatgatgagtggt
gctattcaacagttcgatcggttcatgggggcaagtccagaacaaaatgaataccgaatg
gagcaacccgacagagaaactgcgccgacgattaaaataaaccaaataaccttgagatac
agtgcgaatcaagagcccgtattatcaggtgtctcggctgatattgaatcaggtgattgc
gtcgccgtgattggccctaatgcctgtggcaaaacatccttgttattgtctttacttggc
gtagttgaacctcaggcgggttttattatggtgaataataaaaacttaaaacaatatgac
cctgaaacctttagagaatacgcaggatattgccccgcagagcctgatttatttccaggt
acgttagcggataacttgcgcattgcaaaacctgacgcgactgatgaagaattaattgct
gcattaaaacatgcaggaggtgaatcattatttatcgcgctcaattcaaatttgaacatc
atgttagaaaacaacgcgtcaaacatgctttcggccgtagaagggagttatataaactta
gcgagagcatttcttaaaaagtctaactttattattttagatgaacccttagcaaacaga
aaccctcaagcaagaaaagcctttagcaatacgattttagctttaaaaggaaaggcgaca
attgtctttagtagtcatgatccagagttaatcaaactggcagataaagtgattgtttta
gataaaggtagcgttgtttatgcaggaccaatccctgaaaaaaattcacaagaaatggag
tcatcaaatcatgaataa
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