Chlamydia psittaci VS225: B600_0215
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Entry
B600_0215 CDS
T02312
Symbol
secD
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
cpsv
Chlamydia psittaci VS225
Pathway
cpsv02024
Quorum sensing
cpsv03060
Protein export
cpsv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cpsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
B600_0215 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
B600_0215 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B600_0215 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cpsv02044
]
B600_0215 (secD)
Secretion system [BR:
cpsv02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
B600_0215 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF
MMPL
ACR_tran
SecD_1st
DUF1173
PoNi_N
CDH1_2_SANT_HL1
Motif
Other DBs
NCBI-ProteinID:
AFS22380
LinkDB
All DBs
Position
187467..191681
Genome browser
AA seq
1404 aa
AA seq
DB search
MKQRFGRNLSIIIFVFGLALYYVLPTCLYYSRPLNKKVDEKEAQQIVRKLTNQVAEVRSD
IIPRVSSVLSALKLRGHIVQHPSIPGVVNVHFKDNADAYTFLENMIYGEPTVPIKSSRLY
VLGYDNKDGGVVQVTGALTTALTENDFSFVPYNREDAEPGKEILNAALHLITPAPAHSCS
CGYTSIWNTASIAKVVQLAENLSVGLEILPNSRTPALLNYFFSSEKDYSAFLSRLENVST
HSDLSEQHRSILQSVHQNLKLRSPRWKKAFTRIVDNSLDCSTLSPFFSSVDFSPKERKLV
FCLDPNVLAKRDELSAEQRLDFDSWLAKEKQRLSHKLQRPAQESAQGFAFNLSDKDASGK
IVLHGQRIYQGIVEHLATLALNRPPAQSCDLIREHFPIHCRLPRESDAFGCFIFSPEKSC
SHFSKGSIYVVLKGLRSVAAKYEQGEGEDSKIFEKDLHNLYNCFAHTDAIPWSLGEDEVL
EIRQPLQRYFDVWGENFVVANEGETASLEVRDIRDRLDTLNRIEKRRQEEWVRWHEQYKQ
SSCSMDPQQRIRAAVPHRSAFVENLKLNLRKYSRGDSVLRLGIDFIGGKQIRLAFKDHQG
KQLTDKEGILKVSDELYARLNRLGVSEVEIRREGDNVHLSVPGSTKISSEEILGTSQMTF
HVVNEKFSPYSALRYEVQRFLDYLWFTAQSQDATSPEAVNKLASYIFNNPDSRLPSSVQE
AVAKLQQEGLAFPNMDSEISSSHLDTTYSMIAIEKDVEGKANPLMIVFRNYALDGASLKN
IRPEFAVGEGYILNFSVKDTGIAQKAYDVSPRESFHAWTSTYCQEGISGTENGQYSSGRG
WRMAVVLDGYVVSDPVLNAPLKDQASVSGKFSHREVNRLATDLKSGSMSFVPEVLSEEVI
SPELGKQQRTQGIISVCLGLAVLIILMSVYYKFGGVIASGAVILNLLLIWAALQYLDAPL
TLTGLAGIVLAMGMAVDANVLVFERIREEYLLSRSLTQSVEAGYKKAFGAIFDSNLTTVL
ASLLLLVLDTGPIKGFALTLILGIFSSMFTALFMTKFFFMVWMNKTQETQLHMMNKFIGI
KHDFLKECKRLWMISGSVIALGCVALGFGAWNSVLGMDFKGGYALTLNIADQKSVDVTNV
RSKLGDKFKQVGISPRDFRIKTFGSSDKIKIYFSQNALTRVQTPERPAMEATDPNLSIVM
NLLSDTGIDISSENLKDVQNFWSKVSGQFSNKMRQQACIALVGALLIILLYVSLRFEWRY
AFSAICALIHDLLATCAVLVATHFFLQKIQIDLQAIGALMTVLGYSLNNTLIIFDRIRED
RQEKLFTPMPILINDALQKTLGRTVMTTATTLSVLLILLFVGGGSIFNFAFIMTIGILLG
TLSSLYIAPPLLLFMVRKEERKQQ
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagagatttggacgcaatttaagtattattatttttgtttttggattagctcta
tactatgtgttgcccacatgtctgtattactcacgaccactaaataaaaaagtcgatgag
aaagaagctcaacaaatcgtacgtaagttaacgaatcaggtggctgaagtacgtagcgac
attattcccagagtttcttctgtgctctctgcattgaaattacgcggacatattgtacag
catcccagtatcccgggtgtggtgaatgttcacttcaaagataatgcagatgcctatacg
ttccttgaaaatatgatttatggcgaacccacggttcctataaaatcctcgcgtttatac
gttttagggtacgacaataaagatggcggggttgttcaagttaccggcgccttaactacg
gctttaacagaaaacgatttttcttttgttccctacaatcgagaagatgcagaaccagga
aaggaaattttaaacgctgctcttcatttgattactccagctcctgctcattcttgttcc
tgcggttatacctcgatttggaatacagcatctatagctaaggtagtgcagttagcagag
aacctttcagtgggtttagaaattcttccgaattccaggactccagcgctactgaattac
ttcttctcttctgagaaggattactctgcatttttatcacgattggaaaatgtatcaacg
cattctgatctttcagaacaacatcgatctattttacaatccgtacatcaaaatttgaag
ttgagatcgccaagatggaaaaaagcgtttacgcgcatagtggataattctttagattgc
agcacactatctccattcttttcttccgtagatttttctcctaaagaaagaaaactcgtg
ttttgtctcgatcctaatgtgcttgctaaacgtgatgagttgtctgcagaacagcgccta
gattttgattcgtggttggcaaaagaaaaacaaagattgtctcataagcttcaacgacct
gctcaagaatctgcgcaaggatttgcgtttaatctcagtgataaagatgcgagcggaaaa
atcgtgctgcatggacaacgtatctatcaggggatagtcgagcatttagctacactagct
ttgaacaggcccccagcacaatcttgcgatcttattcgcgaacatttccccatacattgt
cgtttgcctagagaaagcgatgctttcggttgttttattttctcaccagagaaaagttgt
tcgcatttttctaagggatctatctatgtagttcttaagggattacgctccgtcgctgcg
aaatatgagcaaggagaaggagaagattctaagattttcgagaaggatttacacaactta
tacaattgttttgctcatacagatgccattccctggagtctcggagaggatgaggttcta
gaaatccgacagcctttacaaaggtacttcgatgtttggggagaaaattttgtcgttgcc
aatgaaggtgaaactgctagtcttgaagtgcgcgatattcgcgatcgtttagatacccta
aatcgtattgaaaagcgccgtcaagaagagtgggtacgttggcacgaacaatacaaacag
tccagttgttctatggaccctcaacagcgtatacgtgctgctgtacctcaccgaagcgct
tttgttgaaaatcttaaacttaacctacgcaaatactctcgaggagatagtgtccttcgt
ctagggattgattttatcggtgggaaacagatccgcttggccttcaaggatcatcaaggg
aagcagttaacagataaggaagggattcttaaggtttctgatgagctttacgcgcgttta
aataggctgggagtttcagaagtagaaatacgcagagaaggggataacgtacatttaagt
gttcctggatctaccaaaatttcttccgaggaaattttgggaacttctcaaatgactttc
cacgtagtaaatgaaaagttttccccctactctgctctccgttatgaagtccaaaggttt
ttagactatttatggtttacagcacaaagtcaagacgctacttccccggaagcagtgaat
aagctcgcgagttatatttttaacaatccagattcccgcttaccctctagtgttcaagaa
gcagtagccaaactgcaacaggaaggtcttgctttcccaaacatggatagcgagatttct
tcatcgcatttagatactacttattcaatgatcgctatagaaaaagatgttgagggaaag
gcaaaccccttaatgattgttttccgtaactatgctttagatggtgcttcgttaaaaaat
attcggccagaatttgctgtaggcgaagggtacattttaaatttctccgtaaaagatact
ggaatagctcaaaaagcctacgatgtttctccgagagaaagtttccatgcatggacttct
acttactgtcaggaaggtatcagtggaactgagaatggtcagtattcttcaggtagaggg
tggagaatggctgttgtacttgacggttacgtagttagtgatcctgtgttaaatgctcct
ttgaaagatcaagcgagcgtctccgggaagttttcccatcgtgaggtgaaccgcttagct
acagatttaaaatcaggatctatgtcttttgttcctgaagtgttaagtgaagaagttatc
tctcctgaattaggaaaacagcagcgtacacagggaatcatttcagtatgccttggcctt
gctgttttgatcattttaatgagtgtttattacaagttcggcggtgtcattgcttccgga
gctgttattctcaatcttctattaatttgggcagctttacaatatctcgatgcaccacta
accctcactggattggcaggaattgtccttgctatgggaatggctgtagatgctaacgtc
cttgttttcgaaagaattcgagaagagtatttactgtctcgaagtcttactcaatctgta
gaagctgggtataagaaggctttcggagcgatttttgactccaatctcacgactgtattg
gcttcgttacttcttttagttttagatacagggccgattaaagggtttgctcttacttta
atcttgggaattttctcctcaatgtttacagccttatttatgacgaagttcttcttcatg
gtgtggatgaataaaacccaagaaacacagctacacatgatgaataaattcatcggcatc
aagcatgatttcttgaaagagtgcaaaagactctggatgatctccggaagcgtgattgcc
ttagggtgtgtggctttaggttttggcgcttggaattctgttttaggtatggatttcaaa
ggtggttatgcccttaccttgaatatcgctgatcagaaatcggtagatgtgacaaatgtc
cgcagcaaattgggagataaatttaagcaagtagggatatctcctagagactttagaatc
aaaacttttggttcttctgataagataaaaatttattttagtcagaacgcactaacacga
gtgcagaccccagaaagacccgctatggaagcgacagatcctaacctatctatcgtgatg
aatctactttccgatacggggatcgatatctcttctgaaaatctcaaagatgttcagaat
ttctggtctaaagttagcggtcagttttctaataagatgcgacaacaagcttgcatagca
ttggtaggtgccttattaatcatattactgtatgttagcctgcgtttcgaatggcgttat
gcatttagtgctatttgtgctttgattcacgatcttcttgctacttgtgccgtattagtc
gctacgcacttcttcttgcaaaaaatacaaattgatttacaagccataggcgctttaatg
acagtgttggggtattcattaaataataccctcatcatatttgatcgtattcgtgaagat
cgtcaggaaaaattatttacacctatgccgatcttaattaacgatgcactacaaaaaact
ctaggaagaacggtaatgaccacagcaacaacgctatcggtcttgttaatattattattt
gttggtggaggatcaatctttaactttgctttcatcatgacaataggtattctcttaggt
acactatcatctctatacatagcaccgcctcttcttctatttatggttcgtaaagaggaa
agaaaacaacaataa
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