KEGG   Cherax quadricarinatus (Australian red claw crayfish): 128685642
Entry
128685642         CDS       T09502                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 3-like
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
cqd  Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cqd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128685642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cqd03400]
    128685642
Enzymes [BR:cqd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     128685642
DNA repair and recombination proteins [BR:cqd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     128685642
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP LIG3_BRCT RNA_ligase mRNA_cap_enzyme DNA_ligase_A_C AAA
Other DBs
NCBI-GeneID: 128685642
NCBI-ProteinID: XP_053628163
EnsemblRapid: LOC128685642
LinkDB
Position
2:95023057..95275563
AA seq 851 aa
MSSLPFCAXYDKRGAAKCKKCKEKCEKGVLRIGKIVPNPFSESGGEMKQWHHVDCIFDMF
KRARATTKKIEDPVEDIDGWENLEEEDKKKIRALIDDLQNNITPKKATPKKQTPNLQNNT
TPKKATPKKETPQKKAPPQTSKYTGTPKTVKPSRPETSNSDSSKPALPPRADPGTDRNHK
DNSFREFRRICACVADESSYLGKTEILSNFFKNGTSKNGFEGDLRLWVKLLLPGVVKRIY
NLQSKQLVKLFSQLFGTNLEEMIEDLEKGDVAETVREFFERSTVLPPIKKSILSIQDVDE
FLEELSGKTREEEQSMLLKQIAKKSTANDLKMIVRLIKGDLRINAGAKHILDALHPEAYE
AFQTTRNIDTVLDQILDAGSSGVKFQMKAQVMTPVLPMLAEACKSVDYAFKKCPSGAMFA
EIKYDGERVQVHKKGSKFMYFSRSLKPVMSHKVSHFKDYIPKAFPHGKDLILDSEVLLIS
TKTGNPLPFGTLGVHKKAEFQDANVCLFVFDCIHYNGEDLMNVPLSERREILEENMTEIK
NHIMFSEMKLINKKEDLREMIKFVLQEGLEGLVLKDINSIYEPGKRHWLKIKKDYLNDGA
MADSADLVVLGAWYGTGRKGGMMSVFLMGCYDARIDKWCTVTKKAPVWEITGAEFTRHQI
HTGDGISIRFPRVTRERNDKTWKEATNLSELQELYKNSRECLDFEALASDGNDKTDDDDS
SKKNGNSGTSTPVKTPMSGGPSSSSSFNTSPNSAKGEMWKNKVQKTLSRFSKDVEEDNTE
EKKKSDTGKKGLKQEKRKSEDSDRPSKRYNYKFPLPDIFIGIQVSIPNNTEKIDELKRYV
IAYPFIYTRKI
NT seq 2556 nt   +upstreamnt  +downstreamnt
atgtcatcattaccattctgtgcanaatatgacaagaggggtgcagcaaaatgcaagaag
tgcaaggagaaatgtgaaaaaggagttcttcggattggcaagattgttccaaacccattt
tctgaatctggaggagaaatgaagcagtggcatcatgttgattgcatatttgacatgttc
aagcgtgcccgagccactactaagaagatagaagatcctgtggaagatattgatggctgg
gaaaaccttgaagaagaggacaagaaaaagatacgtgctttaattgatgatcttcaaaac
aatatcacccctaagaaagccacacctaagaaacaaaccccaaatcttcagaataatact
acccctaagaaagctacacccaagaaagaaactccacaaaagaaagctcctccacaaact
tcaaaatatacaggaactccaaagactgtgaagcccagtcgaccagaaacatcaaattct
gactcttcaaagcctgcactacctccgagagcagatcctggcacggaccgaaatcacaag
gacaactcttttagggaatttcggcggatatgtgcgtgtgttgctgacgaatcaagctat
ttgggcaaaactgaaatattgtcgaacttttttaaaaatggcactagcaaaaatgggttt
gagggtgacttaagactttgggtgaagctgcttctccctggagttgtgaaacgaatatac
aatctccaatccaagcaactggtcaaacttttttcacagctgtttggcactaatctggag
gaaatgattgaagacttggagaaaggtgatgtggcagaaacagtgcgggaattttttgag
agatccacagttcttcctcctattaaaaaaagtattttgtccatacaagatgttgatgaa
ttcttagaggaattgagtggaaaaacacgagaagaagagcaatccatgcttctaaaacaa
attgctaaaaaaagtactgctaacgatttgaagatgatcgtccgtttgatcaagggagat
ctccggatcaatgcaggagcaaaacacatattggatgctcttcatcccgaggcttacgaa
gcattccaaactacgcgcaacatagatacagtattggaccaaattttggatgctggcagt
tctggagtcaagttccaaatgaaggctcaagttatgactccagtccttcccatgctggca
gaggcatgtaaatcagttgattatgcttttaagaagtgcccaagtggggcaatgtttgca
gaaattaaatacgatggagaaagagttcaggtccacaagaagggcagcaagtttatgtat
ttttcacgttcactaaaacctgtgatgtctcataaggtatcccattttaaggactacata
cctaaggcttttcctcatggtaaagaccttattcttgattctgaagtgttgctcatcagt
acaaaaacaggaaatccattgccatttggaacactgggagttcacaagaaagcagagttc
caggatgcaaatgtgtgcctttttgtctttgattgcattcactacaatggagaagatctg
atgaatgtgccattgtcagaacgtcgtgaaatcctggaagagaacatgactgagattaaa
aaccatattatgttttccgagatgaagctaataaataaaaaggaggatttgcgggaaatg
attaaatttgtcctccaggaaggtcttgaaggcttagttctcaaagatattaatagcatt
tatgaacctggaaagcgccattggctaaaaatcaagaaggattacttgaatgatggagca
atggctgactctgctgacttggtggtgctgggagcttggtatggaactggaagaaaagga
ggaatgatgtcagttttcctgatgggatgctatgatgctagaattgacaaatggtgtact
gttaccaagaaagcgccagtttgggaaatcactggagcagagttcacgcgtcatcagatc
cacacaggagatggaatttccattagatttccacgagttactagagaacgtaatgacaag
acatggaaagaagccacaaatctttcagaattacaggagctgtacaagaattcaagagaa
tgtttagacttcgaagcactagcctctgatggtaatgataagacagatgatgatgacagc
agtaagaagaatggaaactcaggaacctccacacctgtcaaaactcccatgagtggagga
ccatcatccagtagttcgtttaatacttcaccaaatagtgccaaaggagagatgtggaag
aataaggtccagaagacactcagtagattcagtaaagatgttgaagaggataacactgaa
gagaagaaaaaatcagatacaggaaagaagggattgaagcaggagaaaagaaagtcagag
gactcagacagaccttcaaaaaggtacaactataaatttccacttccagatatattcatt
ggtattcaagtcagtataccaaacaacacagagaaaattgatgagctgaaaagatatgtt
atagcgtatccttttatatatactagaaagatataa

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