Cherax quadricarinatus (Australian red claw crayfish): 128690770
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Entry
128690770 CDS
T09502
Name
(RefSeq) LOW QUALITY PROTEIN: photoreceptor-specific nuclear receptor-like
KO
K08546
nuclear receptor subfamily 2 group E member 3
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cqd03000
]
128690770
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cqd03310
]
128690770
Transcription factors [BR:
cqd03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
128690770
Nuclear receptors [BR:
cqd03310
]
2. Hepatocyte nuclear factor 4 like
2E. Tailless like receptor
128690770
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128690770
NCBI-ProteinID:
XP_053635467
EnsemblRapid:
LOC128690770
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Position
27:43743264..43771031
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AA seq
742 aa
AA seq
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MREMEELRKTRAEEDREAEENRGAEEVKGAEEDKGVAEVVCQWCASGVPVVCQWCASVPV
VCKWCASGVLVVCQWCASGVPVVCKWCASGVPVCQWCASGVPVVASGVPVVCQWCARGVP
VVSSGVPVVCQWCASGVQWCASGVPVVCQWCASGVLVVCQWCASGVPVVCQWCASGVPVV
CQWCASGADDFVRSPRDSCSSTSSPVGSPPPRSPSTTPPAAHATPMITPAPFPPALTMHH
HQKDEYESFYSEAIGTEWIDAAVVEMVTWSVGGMGVGGGRRVSPGLQCLVCGDTSSGKHY
GILACNGCSGFFKRSVRRKLIYRCQAGTGACVVDKAHRNQCQACRLKKCIQMGMNKDAVQ
NERQPRNTATIRPEAFADMDQERLLREAAVAVGVFTPPLPLPGLVTAMGGSRGFLGPPSV
TTSTPFTTSHAHHALASIASAPAPPPTSSSNNLATNNNNNNPATINHMSSTANGGMTGML
LAGQRAMSPSKEDHEHGVRSVDSPVDVTGGSSDDTGPIGPHMPPVSSCSSSSSSGTSYVD
TAPLWDPLQESVQETAARLLFMAVKWAKNLPSFSSLPFRDQVVLLEEVWSELFVLNAVQW
SLPLPTCPLLSPSAHAHALAHAHKAAQAAHDIRQLSEVAGAFRDLAVDPAEFAYLKAIVL
FRPEVRGLKDAAQVESLXDQAQVMLSQHVRAHYPARPARFGRLLLLLASLRSPPPPRVQA
LFFTATIGNTPMEKILCDMYKS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatggaggagctgaggaagacaagagctgaggaagatagagaagctgaggaa
aatagaggagctgaggaagttaaaggagcagaggaagataaaggagttgcggaagtggtg
tgccagtggtgtgccagtggtgtgccagtggtgtgccagtggtgtgccagtgtgccagtg
gtgtgcaagtggtgtgccagtggtgtgctagtggtgtgccagtggtgtgccagtggtgtg
ccagtggtgtgcaagtggtgtgcaagtggtgtgccagtgtgccagtggtgtgcaagtggt
gtgccagtggtggctagtggtgtgccagtggtgtgccagtggtgtgcccgtggtgtgcca
gtggtgtccagtggtgtgccagtggtgtgccagtggtgtgcaagtggtgtgcagtggtgt
gccagtggtgtgccagtggtgtgccagtggtgtgccagtggtgtgctagtggtgtgccag
tggtgtgccagtggtgtgccagtggtgtgccagtggtgtgctagtggtgtgccagtggtg
tgccagtggtgtgccagtggcgctgacgacttcgtcaggtcacctcgtgactcctgcagc
agcacaagcagtccggtggggtcgccgccccctcgctccccctccaccacgccccccgcc
gcccacgccacgcccatgatcacgcccgcgcccttcccccctgccctcaccatgcaccac
caccagaaagacgagtatgaatccttttacagtgaagccattggcacggagtggattgat
gcagcagttgtagagatggtcacatggagcgtgggcggcatgggggtgggcggtgggcgg
cgggtgtcacccggcctgcagtgcctggtgtgtggagacacgtcttcgggtaaacactac
ggtatcctcgcctgcaacggctgctcagggttcttcaagaggtccgtccggcggaagctt
atctacaggtgccaggctgggacaggcgcctgtgtggtggacaaggctcacaggaaccag
tgccaagcctgccgactcaagaagtgcattcagatgggcatgaacaaggatgcggtgcag
aacgagcggcaacctagaaacacagccaccatccggccggaagccttcgctgacatggac
caagagaggcttctccgtgaagcagcagtcgcggtgggagtcttcacgcctcccctgccc
ctgcccggcctggtgacagccatgggaggttccaggggcttcctgggtcctccctccgtc
accacctccacgcccttcaccacctcccacgcccaccacgccctcgcctccatcgcctcg
gcgcccgcgcctccacccacctcctccagcaacaacctcgccactaacaacaacaacaac
aacccggccactatcaaccacatgtcgagcactgccaacggtgggatgacgggcatgttg
ctggccggtcagagggccatgtcgccctccaaagaggaccacgaacacggagttcgtagt
gtggactcgccagtggatgtaacaggtggtagcagcgatgatacagggccaataggccca
cacatgccacctgtgtcctcatgttcgtcttcgtcctcgtcagggacctcttacgtggat
acagcgcccctgtgggacccactacaggagtcagtgcaggagacggcagccagactactt
ttcatggccgtcaaatgggctaagaatcttccttccttcagtagtctgccctttcgtgac
caggtggtgctactggaggaagtgtggtccgaactctttgtactaaatgctgtccagtgg
tccctcccactgcccacctgccctctcctctcaccctctgctcatgcccacgcccttgct
cacgcccataaagctgctcaggccgcccacgacattcgccagttgtctgaggtagctgga
gcatttagagacctggcagtggatcctgctgagttcgcttacctcaaggccatcgttctc
ttcagaccagaagtgcgggggctgaaggatgcagcacaggtggagtcgctgncagaccag
gcacaggttatgctaagccagcacgtgagggcccactacccagcacgaccagcacgtttt
ggtcgtcttctgctgcttcttgcctctctcaggtcaccccctccaccccgcgtccaggca
ctattcttcactgccaccatcggcaacacccccatggagaagatcctatgtgacatgtac
aagagttga
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