Cherax quadricarinatus (Australian red claw crayfish): 128701742
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Entry
128701742 CDS
T09502
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128701742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128701742
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128701742
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128701742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
DUF2433
Motif
Other DBs
NCBI-GeneID:
128701742
NCBI-ProteinID:
XP_053651612
EnsemblRapid:
LOC128701742
LinkDB
All DBs
Position
77:4629106..4736905
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AA seq
639 aa
AA seq
DB search
MAASRKLQGEIDRCLKKVAEGVEQFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWLASGEIKDKSQLLENRKLIETQMERFKVVERETKTKAYSKEGLGAAQNKDPAQRE
REEVNSWLSSSIDTLNIQMDQFESEIESLLATQKKKKMDKDKSDRIEDLKEYIDRHQYHI
KKLEILMRMLDNQSIDCDQIKMIKEDVEYYIESSQDPDFSENLGLYDDIDMDDLDYPTPE
ITVGKHVLGGSHDSTDGSTPSSACGSSPAPSPATNHSNDHDAPTTPHDKKRSSKNEESRS
VSSTSQPVKPLVVRPTTNSITNNSTLNSNSSSNTNNSSSVSSSIVVVNSNSSSKATPPPS
TPTKPVSERWPSVGLPPFSDRLVCEESCCSASQTTPNNSNTSSGTSNHLITSTSQHNSTG
RHSPEPSGLMNSSIVNSNSGSGSSSSSSSSSSCSNSSSSSGNSVSNSIGSGSSSSSSSSN
GLSSGVSSSVSVTSPQGSLAGSATTTPALPSGAPTPSAPSAHTGHTSMNAADTTVSLKAI
AQKKVNEVNSTSIPPSVLDGSSCVVSSSSTTSSTNTNSNNNTSATNSSGKSTTTCEAHIP
PLLGVAPLGPAQLTVEHHPRNKSHLPRLCSEENCNWQIF
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatctagaaaattacaaggtgaaattgatcggtgcctgaaaaaagtggcggag
ggagtggaacagtttgaagacatttggcaaaaagttcataatgccactaatagtaaccaa
aaggaaaaatatgaagcagaccttaaaaaggaaattaaaaaacttcaaagattacgtgat
caaatcaagtcttggttagcctcgggggaaataaaggacaaatctcaactactcgagaac
cggaaattgatagaaacgcaaatggaaagatttaaagtagtagaaagagaaacaaagacc
aaagcatacagtaaggagggtctcggggcagcacaaaacaaagacccagcgcagcgagaa
agagaagaagtcaacagttggcttagttcctctatagataccttaaatatacagatggac
caatttgaatcagaaattgagtctttactagcaacgcaaaagaagaagaagatggataaa
gacaagtcggatcggatagaagacctcaaggaatatatagatagacatcagtaccacatc
aagaagttggagattcttatgagaatgctcgacaaccaatccatagactgtgatcagatt
aaaatgattaaagaagatgttgaatactacatcgagtcctcgcaagacccagatttcagt
gaaaaccttgggctatacgatgacattgacatggacgacttggactatccaacacctgaa
ataactgtaggcaaacatgtgcttggcgggagccacgacagcacagacgggtcaacacct
tcctcggcgtgcgggtcatcaccggccccgtcccccgccaccaaccattccaatgaccat
gacgcacccaccacacctcacgataagaagagaagcagtaaaaatgaagagtcaagatcg
gtcagttcaacgagccagccggtaaaacctttggtagtaagaccaacgaccaacagcatc
acaaacaacagtaccctaaatagtaatagtagtagtaataccaataacagcagctctgtg
tcctcctccattgttgtggtcaactcaaattcatcatccaaggccacaccacctccatcc
acccctacaaagcctgtatcagagagatggcccagcgttggacttcctccattcagcgac
agacttgtttgtgaagagtcctgttgttcagcctctcaaactactccaaacaacagtaac
acaagttcaggaacttccaatcatttaatcacctcaacttcacaacacaatagtacaggg
agacattcgccagaaccaagtggattgatgaacagcagtattgtgaatagtaatagcgga
agtggcagcagcagtagcagcagcagtagtagcagttgcagcaacagcagcagtagcagt
ggcaactctgtatcaaacagtataggtagcgggagtagcagtagtagcagcagcagtaat
ggtctcagcagtggagttagcagcagtgtcagcgtaacttctccgcagggcagtctagct
ggcagtgcgactacgactccagcgctaccatctggagcgccaactccgtcagcaccatct
gcccacacagggcacacatctatgaatgctgccgataccacggtatcattaaaagcgata
gcccagaagaaagttaatgaagttaattccacatcgataccaccctcagtgttggatggc
agcagttgtgttgtaagcagcagcagtaccacatccagcactaataccaatagtaacaac
aataccagcgccactaatagttcagggaagagcactacaacgtgtgaagcgcatatccct
ccactattaggagtggctccacttggcccagcccagttaacagttgaacaccatcctaga
aataaatcacatttacctagactgtgttctgaagaaaattgtaattggcagatattttaa
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