Chenopodium quinoa (quinoa): 110734320
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Entry
110734320 CDS
T05764
Name
(RefSeq) LOW QUALITY PROTEIN: BRCT domain-containing protein At4g02110-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110734320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cqi03032
]
110734320
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110734320
DNA replication proteins [BR:
cqi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
110734320
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110734320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
110734320
NCBI-ProteinID:
XP_021770118
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MMYDSSIFFGIRFFLAGFTPQQILEYKSRILSEGGVIYDEYSPDCTHVVVHNIAFDDPIC
VTARRDKKTLVTIIWLKDSLRYGEPIGIGNIMYRPLKDLNGIPGANKLVICLTGYQGMDR
EDMKTMVQLMGAQISKPLVVSTVTHLICYKFEGEKYELAKKMNVTKVVNHRWLVDCLEAW
KILPEEPYSSRSGYELDMEAEAKDSEDEVEDISGRYNNGITIMQNEMGKAHSHFVIARNL
PDPSTQQGFSHNDGKLLQSDNSDFDNVKFDNGDEQRAAFPPSNQTGNGHPSTYGNPKNAG
DFDAENFNSLKHSRKTPQKTALPLHVEEGLGNTIGSLKAPLSSRKTPRSGASLQTAGKSG
KSGGRSKDKSTKKIIEDMPTFNLDIDKAEVASGFLGEPSSKRHVESDVSKLNSLKSRKSP
AKSSLSLQSPGKLSNQDGKLEIPLAEKVIADVCTSNIGSDQGKATSEFRALSAEKANLFD
ENGPGAFLPQKRTSDGASHSTPKSQKLTSSASKRVDASEPRTSVNSSHEKRSSGALNSGC
QIGDEFATPSAGRSSPNVSSSKLKAKTVASSRSLAFEMLQGGDPMNTDSPTXPLTNSVST
SPVAGNNNGQPQTLQKVADTSPGTNDLEAVRSGNLELNSTDQNDIPKPSRKKMVARKTLG
SKSKVCRRSADVQRSSASKDSFRDDAAIHSAGQENKEPPTASPAADKVFVPPAVEESNGV
GSKPHLGTESNNFATLLDDETEAPPELNVDDEPLAAEQSHLVKSKSGEASGMLIHQIDGQ
GMPVAATVGIKKNLISQKGLAVKARKKSLLAAKDAAKDADEAEAGKVKEQVVGAAAKKRH
GTLLLNKSKRPVEAGKEIEPISYDRVEVGREHELDCYDQYENKGGKHSGKLAVKNRRGTL
LSNRSKGHDEVDNENNLVVVCDDGQNGSKNCPADLAAPSNMTLDNVEIKKKNDTGVCNDQ
GTSKVSKCSGKLKMSDGPAEAEMENEPVLDGGQYPRKKVGAPGILDSSMEVDKENEPILA
TNLDTSKGVKRAGKLAGKKRGGTLVLNKSEGQVNEENKNKPDLDDEEVTNKDGIFTEKLT
SKSNSTVNESDAVKGGKRAGKLIGKKRRGTLVINKSEVQVNEGSGNKLVLDNEVDTSNGI
EKLTSKPNLTVNESNAASKGGKCAGKLPGKKRRGTLVLNKSEVQANEESRNKSILDGDED
ASNGKEELTSKSNMIVNESDAAVSNPLNIELKKVKNQAACFILCGHRLQRKEFQQLIKRL
RGKVCRDSHQWSYQASHFVVPEPIRRTEKFFAAAASGSWILKTDYLTASSQAGKFLPEEP
YEWHNSALSEDGAISFKAPRKWRLLREKTGHGAFYGMQIVIYGECIAPPLDTLKRVIKAG
DGTILATSPPYTRILESGVDFAIVSPGMPRVDIWVQEFLRHQIPCVLVDYLVEYVCKPGY
SLDRHVQYNTHEWAAKSFSKLLSLSEEVVADAATPPDDQVSDDLACQVCGSTDRGEVMLV
CGDESGSTGCGIGTHIDCCDPPLESIPEEDWFCPKCTD
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgattcatctatcttcttcggaatccgcttcttccttgctggattcactcct
caacaaatcctcgagtataaatcgaggattttgagtgaaggaggagttatttatgatgag
tatagtcctgattgtactcacgtcgtcgtccacaacatcgcatttgatgatcctatttgt
gttactgctagaagggacaagaagacgcttgtaacaattatatggcttaaggacagttta
cgatacggagaaccgattggcattggtaatattatgtataggccactgaaggatctgaat
ggaattcctggtgctaacaagcttgtcatctgtttgactggataccaagggatggatagg
gaagacatgaagacgatggtgcaattaatgggagcacaaatttctaaaccactggtggtg
agcacagttactcatcttatatgctacaagtttgaaggggagaagtatgagctggctaag
aaaatgaacgttacaaaagttgtcaaccatcgatggttggtagattgcctagaggcttgg
aaaattcttccagaggagccttatagtagtagaagtggctatgaattagacatggaagct
gaggctaaagattctgaagacgaggttgaagatatttctggaagatacaataatgggatt
actataatgcaaaatgaaatggggaaagcccatagtcattttgtgattgcaaggaatttg
ccagatccttctacacaacaagggttctctcataatgatggaaagttgctgcagtctgat
aattctgattttgataatgttaaatttgataatggtgatgaacaaagagctgcgtttcct
ccatctaatcagactggaaatggccacccctctacttatggaaatccaaagaatgctggt
gattttgatgctgagaattttaatagtctaaaacactcaaggaagactccacagaaaact
gctcttccgttgcatgttgaagagggcttggggaacacaattggatcattaaaagctcca
ttgagctcaagaaaaactccaaggtctggggcttctttgcaaactgcaggaaagtctggc
aagtcgggtgggagatcgaaagataaatcaacgaaaaagataattgaagacatgcctacc
tttaatctggacatagacaaggcagaagttgcttcaggtttccttggtgaaccaagttcc
aaaagacatgttgaatctgatgttagcaagcttaattctttgaaatcaagaaaatcacca
gcaaagtctagtctctccttgcaatcaccaggaaagttgagcaatcaagatggaaaattg
gaaattcctcttgctgaaaaggtgattgctgatgtgtgcacctccaatatagggtcagac
caaggaaaagctacttccgaatttagagcattaagtgcagagaaggctaatttatttgat
gagaacggtccgggtgcttttcttccacaaaagaggacttcagatggtgcttctcactct
actcccaaatctcagaagttaacatcttcagccagtaaacgagttgatgcatcagaacct
agaaccagcgtgaattcttctcatgagaaaaggagtagtggtgctcttaattctggctgc
caaataggagatgagtttgccacaccatctgcaggcaggtcatctcctaatgtttcatct
tccaagctcaaagcaaagaccgttgcttcctctagatctttggctttcgagatgctgcaa
ggcggtgaccctatgaacacagattctccaactnaccctcttaccaatagtgtttctact
tcaccagttgctggtaacaacaatgggcaaccccagactctgcagaaagtcgctgatact
tctcctggcaccaatgacttagaggctgtgaggtctggtaatctcgagcttaactctact
gatcaaaatgatattccaaagccatcaaggaagaaaatggtggctaggaagactttgggt
tccaaatctaaagtatgtagacgaagtgctgatgttcagagaagttctgccagcaaagac
tcttttcgagatgatgcagccatacactcagctggtcaggaaaataaagagccacctaca
gcttcacctgctgctgataaagtttttgtgccccctgcagtagaagagtcaaatggtgtg
ggttcaaagcctcacctgggtactgaaagcaataattttgctacacttttagatgatgaa
accgaagctccaccagaattaaatgtggatgatgaaccattggcagctgagcagtcgcat
ttagtgaaatcaaaatccggagaggcatctggcatgctgattcatcaaatagatgggcag
ggaatgcctgtggctgcaactgttggtataaagaaaaacttgatttcgcagaagggattg
gctgttaaagctaggaaaaagtctctgcttgctgcaaaggatgctgctaaagatgcagat
gaggctgaagccggaaaagtgaaggaacaagttgttggtgctgctgcaaaaaaaagacat
ggtactctgttgttgaataagtcaaagaggcctgttgaagcgggaaaagaaattgaaccc
atttcttatgatcgtgttgaagtaggaagagaacatgaacttgattgttatgatcaatat
gaaaataagggtggtaaacattcagggaagttagctgtgaagaataggcgtggaactcta
ctatcaaacaggtcaaagggccatgatgaagtggataatgaaaataacctagttgttgtt
tgtgacgatggtcaaaatggcagtaaaaattgccctgcagatctggctgctccttccaac
atgacactggacaatgtggaaatcaaaaagaaaaatgacactggtgtttgtaatgaccaa
ggcacaagcaaggtttcaaagtgctctgggaagttaaaaatgtcagatggccctgccgaa
gcagaaatggaaaatgagccggtccttgatggtggacaataccctaggaagaaggttggt
gcacctggcatcttagatagttctatggaggttgacaaagaaaacgaacctatcctcgct
actaatctagatactagtaagggtgtaaaacgtgctggtaaattagcagggaagaagagg
ggtggcactctagtgttaaacaagtctgaggggcaagtcaatgaggagaataagaataag
ccagatcttgatgatgaagaagttacaaataaagatggaatattcactgaaaagctgacc
agtaagtccaattcgacagttaatgagagtgatgctgttaagggtgggaaacgtgctggt
aaattaattgggaaaaagaggcgtggcaccttagttataaacaaatctgaggtgcaagtc
aatgaggggagcggaaataaattggttcttgataatgaagttgatacaagtaatggaatt
gagaagctcaccagtaagcccaatttgacagtcaatgagagtaatgcagctagcaagggt
ggaaaatgtgctggtaaattacctgggaaaaagaggcgtggcactctagtattaaacaaa
tcagaggtgcaagccaatgaggagagcagaaataaatcgattcttgatggtgatgaagat
gcaagtaatggaaaggaggagctgaccagtaagtccaatatgatagtcaatgagagtgat
gcagctgtttcaaatcctttgaacattgagttgaaaaaggttaaaaatcaagcagcatgt
ttcatactttgtggacatagattacagagaaaagagttccaacaactcatcaagcgtctc
agaggaaaagtatgccgagattctcatcaatggtcatatcaggcttcacattttgttgtt
ccagaaccaatccgtagaacagaaaagttctttgctgctgcagcatctgggagttggatt
ttgaagactgattacttgactgcaagcagtcaagccggaaagttcttgcccgaggaacct
tatgagtggcacaatagtgccctcagtgaagatggtgctattagtttcaaggctccaaga
aagtggcgccttctaagagagaagacaggtcatggtgctttctatggcatgcaaattgta
atatacggagaatgcatcgctccacctttggataccttaaagcgagtgataaaggctgga
gatgggactatcctagctacttctccaccttacacccgtattcttgaatcaggggtggat
tttgccattgttagtcctgggatgccacgcgttgatatatgggtacaagagtttctcaga
caccaaattccttgtgttttggttgattacttggtggagtatgtttgcaagcctggatac
tctcttgataggcatgttcaatataatactcacgagtgggctgctaagtcattttcaaag
ctcttgagcctgtcagaagaggttgtagccgatgctgctacaccaccagatgatcaggtt
agtgatgacctagcatgtcaagtttgtggctcaactgatagaggggaagtcatgttagtt
tgtggtgatgagagcggttccactggctgtggaatcggaactcacattgattgttgtgat
cctcctcttgagagtatccctgaagaagactggttttgtcccaaatgtactgattaa
DBGET
integrated database retrieval system
