Chenopodium quinoa (quinoa): 110737403
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Entry
110737403 CDS
T05764
Name
(RefSeq) histone deacetylase 19-like isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03082
ATP-dependent chromatin remodeling
cqi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110737403
03083 Polycomb repressive complex
110737403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110737403
Enzymes [BR:
cqi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110737403
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
110737403
HDAC complexes
Sin3A-HDAC complex
110737403
BRAF-HDAC complex
110737403
REST complex
110737403
SHIP complex
110737403
MiDAC complex
110737403
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110737403
Heterochromatin formation proteins
Other heterochromatin formation proteins
110737403
Chromatin remodeling factors
NuRD complex
110737403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
110737403
NCBI-ProteinID:
XP_021773455
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MDSGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPVPARDRDLCRFHADDYVTFLRCITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYQSLFRPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFN
VPLLLVGGGGYTIRNVARCWCYETGVALGIELDDKMPQHEYFEYFGPDYTLHVAPSNMEN
KNSRPMLDEIRAKLLEYLSTLQHAPSVPFQERPPDTDLHEEDEDQQDPDRRWDPDSDMEV
DDDRPLSIRSRVKREIMEPDHKDSEDVKEPVDHARDMVVSYNTGNTSVKAPNLGLDQPEA
CIKMDQDSSNKPSDQPTDMKL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggactcaggaggtaattcgcttccgtctggaccagacggagtgaagcgtaaagtttcg
tatttctatgacccggaagtcgggaattattactacgggcaaggtcaccctatgaagccg
catagaattcgtatgacacatgctcttttagctcattatggtctgcttcaacatatgcaa
gtgcttaagcctgtacctgcaagagatagagatctttgtagattccatgccgatgattat
gtgaccttccttaggtgcattacacctgaaacgcaacaggatcaattgaggcagttgaag
agatttaatgttggtgaagattgtcctgtatttgatggtctgtactcgttttgtcagact
tatgctggcggttcagttggtggtgctgtcaaattgaaccatgggctttgtgacattgcg
attaattgggcaggtggcttgcaccatgcgaaaaagtgcgaggcttctgggttctgttat
gtgaatgatattgttttggcaattttggaacttctcaaagttcatgagcgtgtattgtat
gtggacattgatatacaccacggagatggtgtagaagaggctttttatactacagatagg
gtcatgacagtgtcttttcacaaatttggagattattttcctgggacaggagatattcgt
gatattggatatggaaaagggaagtattattctctcaatgtgcccttagatgatggtatt
gatgatgagagctaccaatcattgtttaggcccattatgggaaaagtaatggaggttttt
aaacctggggctgttgtcctgcaatgtggtgctgattctctgtccggtgacagattgggc
tgttttaacctctccatcagaggtcatgcagagtgcgtcaaatacatgagatccttcaat
gtcccactactgctggtgggtggaggtggctatactataagaaatgtagctcgttgttgg
tgttatgagactggtgttgcccttgggattgaactggatgataagatgccacaacacgag
tactttgagtattttggtccagactatactcttcatgttgctccaagtaatatggaaaac
aagaactcacgccctatgctggatgaaattagagccaagcttcttgaatacctctcaacc
ctacagcatgcaccaagcgttccattccaggagcgtcctcctgatactgatctccacgag
gaagatgaagatcaacaagatccagatcgaagatgggatccagattctgatatggaggtt
gatgatgaccgtcccttatcaatacgaagcagagtgaagagagagattatggagcctgat
cataaagattcggaggatgtcaaagagcctgtggatcatgcaagagacatggtcgtctct
tataatacaggaaatacatctgtgaaggctccaaatttgggcttagatcaaccagaagcc
tgtattaaaatggatcaggatagctcaaataagccctccgatcagccgactgatatgaaa
ttatga
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