KEGG   Chenopodium quinoa (quinoa): 110737403
Entry
110737403         CDS       T05764                                 
Name
(RefSeq) histone deacetylase 19-like isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03082  ATP-dependent chromatin remodeling
cqi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110737403
   03083 Polycomb repressive complex
    110737403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cqi03036]
    110737403
Enzymes [BR:cqi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110737403
Chromosome and associated proteins [BR:cqi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     110737403
   HDAC complexes
    Sin3A-HDAC complex
     110737403
    BRAF-HDAC complex
     110737403
    REST complex
     110737403
    SHIP complex
     110737403
    MiDAC complex
     110737403
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110737403
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110737403
  Chromatin remodeling factors
   NuRD complex
    110737403
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 110737403
NCBI-ProteinID: XP_021773455
LinkDB
Position
Unknown
AA seq 501 aa
MDSGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPVPARDRDLCRFHADDYVTFLRCITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYQSLFRPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFN
VPLLLVGGGGYTIRNVARCWCYETGVALGIELDDKMPQHEYFEYFGPDYTLHVAPSNMEN
KNSRPMLDEIRAKLLEYLSTLQHAPSVPFQERPPDTDLHEEDEDQQDPDRRWDPDSDMEV
DDDRPLSIRSRVKREIMEPDHKDSEDVKEPVDHARDMVVSYNTGNTSVKAPNLGLDQPEA
CIKMDQDSSNKPSDQPTDMKL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggactcaggaggtaattcgcttccgtctggaccagacggagtgaagcgtaaagtttcg
tatttctatgacccggaagtcgggaattattactacgggcaaggtcaccctatgaagccg
catagaattcgtatgacacatgctcttttagctcattatggtctgcttcaacatatgcaa
gtgcttaagcctgtacctgcaagagatagagatctttgtagattccatgccgatgattat
gtgaccttccttaggtgcattacacctgaaacgcaacaggatcaattgaggcagttgaag
agatttaatgttggtgaagattgtcctgtatttgatggtctgtactcgttttgtcagact
tatgctggcggttcagttggtggtgctgtcaaattgaaccatgggctttgtgacattgcg
attaattgggcaggtggcttgcaccatgcgaaaaagtgcgaggcttctgggttctgttat
gtgaatgatattgttttggcaattttggaacttctcaaagttcatgagcgtgtattgtat
gtggacattgatatacaccacggagatggtgtagaagaggctttttatactacagatagg
gtcatgacagtgtcttttcacaaatttggagattattttcctgggacaggagatattcgt
gatattggatatggaaaagggaagtattattctctcaatgtgcccttagatgatggtatt
gatgatgagagctaccaatcattgtttaggcccattatgggaaaagtaatggaggttttt
aaacctggggctgttgtcctgcaatgtggtgctgattctctgtccggtgacagattgggc
tgttttaacctctccatcagaggtcatgcagagtgcgtcaaatacatgagatccttcaat
gtcccactactgctggtgggtggaggtggctatactataagaaatgtagctcgttgttgg
tgttatgagactggtgttgcccttgggattgaactggatgataagatgccacaacacgag
tactttgagtattttggtccagactatactcttcatgttgctccaagtaatatggaaaac
aagaactcacgccctatgctggatgaaattagagccaagcttcttgaatacctctcaacc
ctacagcatgcaccaagcgttccattccaggagcgtcctcctgatactgatctccacgag
gaagatgaagatcaacaagatccagatcgaagatgggatccagattctgatatggaggtt
gatgatgaccgtcccttatcaatacgaagcagagtgaagagagagattatggagcctgat
cataaagattcggaggatgtcaaagagcctgtggatcatgcaagagacatggtcgtctct
tataatacaggaaatacatctgtgaaggctccaaatttgggcttagatcaaccagaagcc
tgtattaaaatggatcaggatagctcaaataagccctccgatcagccgactgatatgaaa
ttatga

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