Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ008192
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Entry
CpipJ_CPIJ008192 CDS
T01079
Name
(GenBank) ATP-dependent RNA helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ008192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ008192
03009 Ribosome biogenesis [BR:
cqu03009
]
CpipJ_CPIJ008192
Enzymes [BR:
cqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CpipJ_CPIJ008192
Spliceosome [BR:
cqu03041
]
Complex A
U2 snRNP components
U2 related factors
CpipJ_CPIJ008192
Complex B
CpipJ_CPIJ008192
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
CpipJ_CPIJ008192
Ribosome biogenesis [BR:
cqu03009
]
Eukaryotic type
90S particles
Helicases
CpipJ_CPIJ008192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
AAA_25
Flavi_DEAD
ABC_tran
AAA_24
AAA_30
T2SSE
TsaE
Motif
Other DBs
NCBI-ProteinID:
EDS30231
VectorBase:
CPIJ008192
UniProt:
B0WL58
LinkDB
All DBs
AA seq
729 aa
AA seq
DB search
MSKRRIEVMDPFIKKLREEKGMLDSGASSSKSGGSGSSGSGGSGGSSGKMNPLNGIPYTQ
NYYNLYKKRITLPVFEYRADFMRLLSEHQCIVLVGETGSGKTTQIPQWCVDFARCSGSKG
VACTQPRRVAAMSVAQRVSEEMDVILGMEVGYSIRFEDCSSAKTILKYMTDGMLLREGMS
DPMLETYQVILLDEAHERTLATDLLMGVLKEVIRQRKDLKLVIMSATLDAGKFQQYFDNA
PLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDIEGDILMFLTGQEEIEEACK
RVKREIDNLGPEVGELKCIPLYSSLPPNMQQKIFEPAPPKRPNGAVGRKVVISTNIAETS
LTIDGVVFVIDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTE
KAYKTEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLA
ALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEMK
KAADDAKKRFAHLDGDHLTLLNVYHAFKQNNEDPSWCYDNFINFRSLKSADNVRQQLARI
MDRFNLKRTSTDFNTTNYYFNIRKALVQGFFMQVAYLEQTKHYVTIKDNQIVQLHPSTCL
GHRPNWVMYNEFVLTTKNYIRTVTDVKPEWLLQIAPQYYDMNNFPECEAKRQLTVIAAKL
ETKQYQQGF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccgcatcgaagtgatggatcccttcatcaagaagctgagggaggaaaag
ggaatgctggattccggtgcatcctccagcaaaagtggcggctccggttcgtccggtagt
ggcggttcgggaggttcttcggggaagatgaatccacttaacgggattccgtacacgcag
aattactacaatctgtacaagaagcgcatcacactgcccgtgtttgagtaccgcgcggac
ttcatgcggctgctgtcggaacatcagtgcatcgtgctggtcggtgagaccggttccggc
aagaccacccagattccccagtggtgtgttgactttgcccggtgcagcggttcgaaggga
gtcgcgtgcacgcagccccgtcgagtggcggccatgtccgtggcgcagcgtgtttccgag
gaaatggacgtgattcttggcatggaagtcggttacagcatccgtttcgaggactgctcg
tcggccaagaccattctcaagtacatgacggacggtatgttgctccgcgagggcatgagc
gatccgatgttggagacgtatcaagtaattttgcttgacgaggctcacgagcgtacgttg
gccacggatctgctgatgggtgtcctgaaggaggttatccggcagcgcaaggatctgaag
ctggttattatgtctgccacgctggacgctggcaagttccagcagtactttgacaatgcc
ccgctgatgaacgtgccaggtcgaacgcatccggtcgagatattctacaccccggaaccg
gagcgggactatttggaggccgctatccgtacggtgatccagattcacatgtgcgaggac
atcgagggcgacattctaatgttcttgaccggtcaggaggaaattgaagaggcttgcaag
cgtgtcaagcgagagatcgataatctcggtccggaggttggcgagctcaaatgtattccg
ctgtactcgtctctgccgccgaacatgcagcaaaagattttcgagccggcgcctcccaag
cgcccgaacggagcggttgggcgcaaggtggtcatttcaaccaacattgccgaaacatct
ctcaccatcgacggagtagtgttcgtgattgatccgggcttttccaagcaaaaggtttat
aacccgcgaatccgcgtcgaatcgcttctggtttctcctataagtaaggccagcgcgcag
caaagagctggtcgagctggccgaacacgaccgggaaaatgtttccggctgtacacggaa
aaagcatacaaaaccgagatgcaggacaacacgtacccggaaattttgcggtccaatttg
ggaacggtcgtcttgcagctgaagaaactcggaatcgacgatttggtgcactttgacttt
atggacccaccggcaccggaaacgctgatgcgagcactcgagctgctgaactacttggcc
gccctggacgacgacggaaacctgaccgacctgggcgccgtaatggccgagtttccgctg
gatccgcagctagccaagatgttgatcgccagctgccagcacaactgctccaacgagatc
ctctcgatcacggccatgttatcggtcccgcagtgtttcgtacgcccgaacgagatgaaa
aaggccgccgacgatgccaagaagcggttcgcccacctggacggcgaccacttgacgctc
ctgaatgtgtaccatgccttcaagcagaacaatgaggatccgagctggtgctacgataac
tttatcaacttccgctcgctcaagtcggccgacaatgtgcgccagcagctcgcccggata
atggaccggttcaacctgaagcgcacgagcaccgactttaacaccacaaactactacttc
aacatccggaaggcgctggtgcagggcttcttcatgcaggttgcctacctggagcaaacg
aagcactacgttacgatcaaggataaccagatcgtccagctgcacccgtcgacctgtcta
ggccaccgacccaactgggtgatgtacaacgagtttgtgttgaccacgaaaaactacatt
cgcaccgtcaccgacgtgaaaccggaatggttactgcagattgcgccacagtactacgac
atgaacaatttccccgagtgtgaggccaagcgccagctgacggtcatagcggccaagctc
gagacgaaacagtaccagcaaggattttag
DBGET
integrated database retrieval system
