Capsella rubella (pink shepherd's-purse): 17879679
Help
Entry
17879679 CDS
T02984
Name
(RefSeq) DNA-binding protein SMUBP-2
Organism
crb
Capsella rubella (pink shepherd's-purse)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
DEAD
Viral_helicase1
Helicase_RecD
SMUBP-2_HCS1_1B
ResIII
PIF1
UvrD-helicase
UvrD_C_2
Flavi_DEAD
AAA_22
ATPase
AAA_16
ATPase_2
cobW
DAP3
nSTAND3
T2SSE
UvrD_C
AAA
AAA_7
Motif
Other DBs
NCBI-GeneID:
17879679
NCBI-ProteinID:
XP_006283073
UniProt:
R0F3P3
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MEAASSFLCRSIRIPSTTTATAAFTFTRPPVNYVCVVKRDGNGGVRVIPTRKVYCSGVNG
GSSSSAATKKKPRRKSNVSDKIRSRKIEKRNDSGESVSLISESVVEKVREEEDDERPRKK
GDKEMSLRALNQNGDPLGRRDLGRNVVKWISQAMKAMASDFATAEVQGEFLELRQTVGSG
LTFVIQAQPYLNAIPMPLGSEVVCLKACTHYPTLFDHFQRELRDVLQDLERKNVMENWKE
TESWKLLKEIANSAQHREVARKAAQPKPVQGVFGLDSEKVKAIQGRIDEFTSQMSQLLQV
ERDTELEVTQEELDVIPTPDERSDSSKPIEFLVRHGDAPQELCDTICNLYAVSTSTGLGG
MHLVLFKVGGNHRLPPTTLSPGDMVCIRICDSRGAGATACTQGFVHNLGEDGCSIGVALE
SRHGDPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSISVVATLFG
DGEDIEWLEQKDYVDWSEAELSDEPVGKLFDDSQRRAIALGVNKKRPVMIVQGPPGTGKT
GMLKEVITLAVQQGERVLVTAPTNAAVDNMVEKLLHLGLNIVRVGNPARISSAVASKSLG
EIVNSKLASFRAELERKKSDLRKDLRQCLRDDVLAAGIRQLLKQLGKTLKKKEKETVKEI
LANAQVVFATNIGAADPLIRRLETFDLVVIDEAGQAIEPSCWIPILQGKRCILSGDPCQL
APVVLSRKALEGGLGVSLLERAASLHNGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSA
PSVASHLLIDSPFVKPTWITQCPLVLLDTRMPYGSLSVGCEERLDPAGTGSLYNEGEADI
VVNHVISLIYAGVSPMAIAVQSPYVAQVQLLRERLDEFPVADGVEVATIDSFQGREADAV
IISMVRSNNLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTFLARLLRHIRYFGR
VKHADPGSLGGSGLGLDPMLPYLG
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagcgtcaagtttcttgtgtaggagtattaggattccgtcgacaacgacggcg
acggcggcgttcacgtttactcgaccgccggtgaattacgtttgtgtggttaagagagat
ggtaacggcggcgttcgtgttatcccgacgcggaaggtctattgcagcggtgttaatggt
ggttctagttctagtgctgctactaagaagaagccacggaggaaaagtaatgtttccgat
aagattaggtctaggaaaatcgagaagaggaacgatagtggtgaatctgtgagtttaatt
agtgaatctgttgttgagaaggttagggaagaggaagatgatgagagaccgaggaagaag
ggagataaagagatgagtcttcgtgctttgaatcaaaatggtgatccattggggcggaga
gatttagggagaaacgtagtgaagtggattagtcaagctatgaaggctatggcttcggat
tttgctactgcggaggttcaaggggagtttttggagttaaggcagacggtgggatctggt
ttgacgtttgtgattcaggctcagccatatcttaatgctattcctatgccgttaggttct
gaagtcgtttgtttgaaggcttgtacacattatccgaccttgtttgatcatttccagaga
gagttgcgtgatgttcttcaagaccttgagcggaagaatgtaatggagaattggaaggag
actgagtcttggaagctgctcaaggagatagcaaattcagctcagcatcgggaggttgct
cgcaaagctgctcaaccaaagcctgttcaaggagtttttgggttggactcagagaaggtg
aaggctatacagggaaggattgatgagttcactagccagatgtcgcagttgcttcaagtg
gaacgagatacagaactggaagtcacgcaggaggaactagatgttatccctactccagat
gagcgctctgattcctcaaaaccgattgagttcttggttaggcatggtgatgctccacaa
gaactttgtgatacaatttgcaatttgtatgcagttagtacctccacagggctcggaggt
atgcacttggtgttgtttaaggttgggggaaaccaccgtcttcctcctactacactttcc
cctggtgacatggtttgcataagaatttgtgacagtagaggtgctggagcaactgcctgt
acgcaggggtttgttcacaaccttggagaagatggctgtagcataggtgtggctctagaa
tctcgtcatggcgatcctactttctccaagctcttcgggaaaagtgtgagaattgatcgt
attcatgggttggccgatgccctaacttatgagcgtaactgcgaagccctaatgcttctt
cagaagaatggtctgcagaagaaaaatccatcaatttctgtagtggcgactttatttggg
gacggggaagatatagaatggctggagcagaaggattacgtagactggagtgaggcagag
ttgagtgatgagccagtgggtaagttatttgatgattcccaaaggagagccatagctctt
ggagtaaacaaaaaaaggcctgttatgatagttcaaggacctcctggcacgggaaagact
ggaatgcttaaggaggtcattacccttgcggttcaacagggggaaagagtacttgtaaca
gcacctactaatgcagctgttgataatatggtggagaagctcttgcatctcggactaaac
attgtccgagtaggaaatcctgcaagaatatcatctgctgttgcttcaaaatctttgggg
gaaattgtgaactctaagctggcaagcttccgagcagagttggagaggaagaagtcagac
ttaagaaaagaccttcggcaatgcctgagggatgatgttcttgcagctggcattcggcag
ctcttgaaacagcttggaaagacgttgaagaagaaggaaaaggagaccgtgaaggaaata
ctagcaaatgcacaggttgtttttgccactaacattggagcagctgatcctttgattagg
aggctagaaacatttgatttggttgtaatagatgaagctggtcaggctatcgagccttca
tgctggatcccaatattgcaagggaaacgttgtattctttccggtgatccatgccaatta
gcaccagttgttctatctcgtaaagctttagaaggtgggcttggtgtatccttactggaa
agagctgcatctttgcataatggagttcttgcgacaaaattaacaactcagtatcgtatg
aatgatgtaattgctggttgggcatcaaaggagatgtatggtggatggttgaaatctgct
ccaagtgtggcctctcatctgcttatcgattctccttttgtgaagcctacttggataaca
caatgcccactggttctgcttgacacaagaatgccatatggaagtttatcagtggggtgc
gaggagcgtctagatccagctggtacagggtcattatacaatgaaggagaagcagatatt
gtggttaatcacgtcatttcgttgatatatgcaggtgttagtccaatggctattgctgtt
cagtccccatatgttgctcaggttcagcttctcagggaaaggcttgacgagtttccagtg
gctgatggagttgaggtcgcaaccattgacagctttcaagggcgagaggctgatgcagtt
atcatctcaatggtacggtcgaacaacctaggtgcagtgggattcttaggggatagcaga
cggatgaacgtagccataacaagagcccggaaacacgtggcagtggtatgcgatagctcc
acaatctgccacaacacgttcctcgcaaggctcctgcgtcacatacgctatttcgggagg
gtaaagcatgcagacccaggtagtttgggtggttcaggactaggcttggacccaatgcta
ccttacctcggctaa
DBGET
integrated database retrieval system
