Capsella rubella (pink shepherd's-purse): 17880478
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Entry
17880478 CDS
T02984
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 36a
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
17880478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17880478
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
17880478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltr_RsmB-F
PCMT
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
17880478
NCBI-ProteinID:
XP_006284136
UniProt:
R0GJJ5
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MRPPLTGSGGYSGGRGRGGYSGGRGDGGFSGGRGGRGGRGFGDRGGRSAGRGRGRGSDRG
RGGRGPGGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNE
DGTKVEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCV
YAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARIVA
LNASYFLKTGGHFVISIKANCIDSTVPAEAVFQTEVKKLQAEQFRPAEQVTLEPFERDHA
CVVGGYRMPKKTKAATAA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagacctcctctaactggaagtggtggttacagtggtggaagaggtcgcggtgggtac
agtggtgggcgaggtgatggtggtttcagtggtggacgaggtgggagaggaggaagaggt
ttcggtgaccgtggtggtcgcagcgccggcagaggaagaggccgtggcagtgaccgtggt
cgcggaggcagaggaccaggaggccgtggagggatgaaaggaggaagcaaagtcattgta
gaacctcacagacatgcaggagtgtttattgcaaagggtaaagaagatgctcttgtcacc
aagaacttggtccctggtgaagctgtgtacaatgagaagagaatctctgttcagaatgaa
gatggaactaaggttgaatatagagtttggaaccctttccgttctaagttggcagctgct
attctcggtggtgttgacaacatctggattaaacctggtgctaaagttctataccttggt
gctgcttctggaaccacagtttctcatgtctctgatcttgttggccctgagggatgtgtg
tacgctgttgagttttctcacagaagtggaagagatttggtgaacatggcaaagaagaga
accaatgttattccaatcattgaggatgctagacaccctgctaagtacagaatgctcgta
ggcatggttgatgttatcttctctgatgttgctcagccagatcaggctaggattgtggct
ttgaatgcatcatacttcctcaaaacaggaggtcactttgtgatctcaatcaaggcaaac
tgtatcgactcaacagttccagcagaagctgtgttccagacggaagtgaagaagttgcaa
gcggagcaattcaggccagctgagcaagtgacccttgagccattcgagcgtgatcacgcc
tgtgtcgttggtggctaccgtatgcctaagaagaccaaggccgctactgctgcttag
DBGET
integrated database retrieval system
