KEGG   Capsella rubella (pink shepherd's-purse): 17884422
Entry
17884422          CDS       T02984                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:crb01002]
    17884422
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:crb03110]
    17884422
Peptidases and inhibitors [BR:crb01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   17884422
Chaperones and folding catalysts [BR:crb03110]
 Other chaperones and cochaperones
  AAA proteases
   17884422
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext TIP49 AAA_22 AAA_16 RuvB_N AAA_17 IstB_IS21 AAA_5 AAA_28 nSTAND3 AAA_14 Mg_chelatase AAA_18 AAA_33 DUF5906 LonB_AAA-LID Parvo_NS1 Sigma54_activat ATPase TsaE AAA_7 AAA_19
Other DBs
NCBI-GeneID: 17884422
NCBI-ProteinID: XP_006287200
UniProt: R0H944
LinkDB
Position
Unknown
AA seq 686 aa
MMKMASTSSSALSLPLSNIPTCNKKSHKFQKPTHLSKSCHIPCLNIQTLDHNKLTKRALL
CLTALGCTSSLGTFLALPAKAEPETPIEATSNRMSYSRFLQHLEENEVKKVDLFENGTVA
IAEISNPALGKIQRVRVNLPGLPVDLVRDLKEKNVDFAAHPMDVNWGALLLNFLVNFGFP
LILLGSLLVTSSFRKTPGGPNLPFGLGRSKAKFEMEPNTGITFEDVAGVDEAKQDFEEIV
EFLRTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGV
GASRVRDLFNKAKANSPCLVFIDEIDAVGRMRGTGIGGGNDEREQTLNQILTEMDGFTGN
TGVIVIGARNRPEILDSALLRPGRFDRQVSVGLPDVRGREEILKVHSKSKKLDKEVSLSV
IAMRTPGFSGADLANLMNEAAILAGRRGKDKITLEEIDDSIDRIVAGMEGTKMVDSKSKA
IVAYHEVGHAICATLTDGHDPVQKVTLVPRGQARGLTWFLPREDPTLVSKQQLFARIVGG
LGGRAAEEVIFGEPEITTGAASDLQQVTQIARQMVTMFGMSEIGPWALTDPAAKQNDVIL
RMLARNSMSEKLAEQIDSCVKKIIEDAYEVAKKHVKSNREAIDKLVDVLLEKETLTGDEF
RAILSEYTDQPLNTDVRILNRDLVSV
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgatgaaaatggcatcaacatcatcatcagctttgtctctccctctttctaacatccca
acctgtaataagaagtcccataagtttcagaaaccgactcatttatccaaatcatgtcac
ataccttgtctcaatatccaaactttagaccataataaactcaccaagagagctctactg
tgtttgactgccttggggtgtacgtcttctctaggaacttttcttgctctcccggcaaaa
gctgaaccagaaactcccatcgaagccacttcaaatagaatgtcgtactcgagattcctg
cagcatctggaagagaatgaagtgaagaaagttgacttgttcgagaacgggaccgttgcc
atcgcagagatctccaatccagcattaggaaagatccagagagttagggtcaaccttccc
ggtttaccggtcgatctggtgagggatttgaaggagaagaacgtcgatttcgctgctcat
cccatggatgtgaactggggagctctcttgctcaatttcttggtgaattttgggtttcct
ttgatcttacttggctctctgcttgtaacatcttctttcagaaaaacacctggtggacct
aatttgccttttggtcttggaagaagcaaagctaagtttgagatggaaccaaacacaggg
ataacgttcgaggacgtagcaggagtagacgaagccaaacaagactttgaagagatcgtt
gaattcttacgaacgccagagaaattctcagctttgggggctaaaatcccgaaaggcgtc
ttgttgaccggacctccgggaactggaaagactctgctggctaaggctatagccggagaa
gccggtgttccgtttttttcattgtcaggctcggagttcatagagatgtttgttggtgta
ggagcttctagggttagagacttgttcaacaaggcaaaagcgaattcaccttgtttagtg
ttcattgatgagattgatgctgttgggagaatgagaggaaccggcattggaggaggaaac
gacgaacgtgaacagacgctaaaccagattttaacagaaatggacgggtttacgggaaat
accggagtgattgtgatcggtgcaaggaaccgaccggagattctagactctgctttactc
cgaccaggaagattcgatagacaggtttcggttggtttaccggatgtaagaggaagagag
gagatattaaaagttcacagcaaaagcaagaaacttgacaaggaagtgtctttgagcgtg
attgccatgagaactccaggtttcagtggagctgacctggcaaatctaatgaacgaagcc
gccatactcgccggaagaagaggaaaagacaagattaccctggaagagattgacgactcg
atcgatcggattgtggccggaatggaagggacgaagatggtcgacagtaaaagcaaagcc
attgtagcctaccatgaagtaggacacgctatctgtgcgactttgacggatggtcacgat
ccggttcagaaagttacgttggttcctagaggtcaagcacgtggtctcacttggttctta
ccgagagaagatccaacgttggtgtctaaacagcaactattcgctagaatcgtcggagga
ttaggaggcagagccgccgaggaagtaatcttcggagaaccggagataaccacgggagcc
gccagcgatctccaacaagtcactcagattgcaagacagatggtgacgatgtttggtatg
tcggagattggtccatgggcactaaccgatccagctgctaaacaaaacgacgtcatttta
cgtatgctcgctaggaactcaatgtcagagaaactcgcggagcaaattgattcgtgcgta
aagaaaataatcgaggacgcttatgaggtcgcaaagaagcatgtgaagagtaacagagaa
gccatagacaagcttgttgatgttttgttggagaaggaaaccttaacgggagacgagttt
cgagcaattctgtctgagtacactgatcaaccgttaaataccgatgttagaattctaaac
agagacttggtcagtgtgtaa

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