Capsella rubella (pink shepherd's-purse): 17887256
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Entry
17887256 CDS
T02984
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00450
Selenocompound metabolism
crb00970
Aminoacyl-tRNA biosynthesis
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
17887256
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
17887256
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crb01007
]
17887256
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17887256
Enzymes [BR:
crb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
17887256
Amino acid related enzymes [BR:
crb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
17887256
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
17887256
Prokaryotic type
Other AARSs
17887256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Toprim
Motif
Other DBs
NCBI-GeneID:
17887256
NCBI-ProteinID:
XP_006290755
UniProt:
R0HIH8
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MAARLNTSLHNALSLLNPFNTPLSTKPFYSRNSSFRFSKKFQSSSGKRALYCTSSFGSQE
NGVDGAETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKI
ATSAAANGRNPAEHCDLISQSYRSLWKDLDIAYDKFIRTTDPKHEAIVKEFYTRVFANGD
IYRADYEGLYCVNCEEYKDEKELLENNCCPIHQAPCVARKEDNYFFALSKYQKPLEEILS
QNPRFVQPSYRLNEVQSWINSGLRDFSISRALLDWGIPVPDDDKQTIYVWFDALLGYISA
LTEDNEQQNLETALSLGWPASLHLIGKDILRFHAVYWPAMLMSAGLNLPKMVFGHGFLTK
DGMKMGKSLGNTLEPFELVQKFGPDAVRYFFLREVEFGNDGDYSEDRFIKIVNAHLANTI
GNLLNRTLGLLKKNCESTLVVDSTIAAEGVPLKDTVEKLVEKARTNYETLSLSSACEAIL
EIGNAGNTYMDQRAPWFLFKQGGDSAEAAAKDLVIILEVMRIIAVALSPVAPCLSLRIYS
QLGYSVDQFNSISWNDTKWGGLKGGQVMEQASPVFARIELNPEKEEEEKKPKVGKKTGKA
KVKVEQTPTVAEA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaggttgaacacgtcgcttcataacgccctctctttgttaaacccttttaac
actcccctcagtaccaaaccattctattctagaaacagcagcttcagattttccaaaaag
tttcaatcttcctccggtaagagagctctctactgcacttccagcttcggaagtcaggaa
aatggcgtcgatggagccgagacatttgtcctcaccactcctctttattacgttaatgcc
cctcctcacatgggtagtgcttacaccactatagccgccgattcaattgctcgtttccag
aggctgctgggcaagaaggttatctttatcacaggaacagatgaacatggtgagaagata
gctacctcagcagctgcaaatgggcgcaatcctgctgagcattgtgatctcatttctcaa
tcttatagaagtctttggaaagatctcgatatagcttatgacaagttcatcagaaccact
gatcctaagcatgaagcaatcgttaaagagttctacactcgagtttttgcaaacggcgat
atatacagagctgattatgaaggactttactgtgtgaactgcgaggaatataaggatgag
aaagagctgcttgaaaacaattgttgccctattcaccaagcgccatgtgttgcaaggaaa
gaagataactacttctttgctttatcaaaatatcagaagccacttgaagagattttgtcc
cagaatcctcgttttgtgcagccttcgtatcgtctaaatgaggttcaaagttggataaat
agtggcttaagagatttttccatttctcgagcattattagactggggaattcctgttcct
gatgatgataaacaaaccatatatgtttggtttgacgctctactgggttacatatcagct
ctaacagaggacaatgagcaacaaaatctagaaactgctctttcattaggctggcctgcc
tcattgcatttgatcggaaaggatattcttcgatttcatgccgtctactggcccgccatg
ctaatgtctgctggtctgaaccttcccaagatggtgtttggccatgggtttctgacaaag
gatggaatgaaaatgggaaaatcgttgggaaatactctagaacctttcgagttggttcag
aaatttgggccagatgccgtcaggtacttcttccttcgagaggtggaattcggaaatgat
ggggactattcagaagaccgctttataaaaattgtcaatgcacatctcgccaacacaata
ggaaatctccttaaccgtactcttggacttcttaagaagaactgtgagtccactttagtg
gtagactcgacaattgcagctgaaggggttccgttgaaagacacagtggagaagctggtt
gaaaaggctcggacaaactatgaaactctgtcactatcatcggcgtgtgaagctatttta
gagattggaaatgcgggaaatacctacatggatcaacgagcaccttggttcctgttcaaa
caaggtggtgactcagctgaagctgcagccaaggatttggtgattatacttgaagtaatg
agaattatagcggttgcgctatcccccgttgcgccttgcttaagcctgaggatatattca
cagcttggctattcagttgatcaattcaatagcataagctggaatgacaccaaatgggga
gggctaaaggggggacaagtaatggagcaagcgagtcccgtatttgcaaggatcgagctg
aatccagagaaagaagaagaggagaagaagccaaaggttggtaagaaaaccggaaaagcc
aaggtcaaggtagagcaaactccaactgtagcagaagcttga
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