Capsella rubella (pink shepherd's-purse): 17893251
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Entry
17893251 CDS
T02984
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
17893251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17893251
03036 Chromosome and associated proteins [BR:
crb03036
]
17893251
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
17893251
Coactivators
SAGA/TFTC/STAGA complex
17893251
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
17893251
STAGA complex
17893251
TFTC complex
17893251
SAGA complex
17893251
SLIK complex
17893251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
DUF5827
Motif
Other DBs
NCBI-GeneID:
17893251
NCBI-ProteinID:
XP_006297380
UniProt:
R0I1N4
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MDQPRQSTTASQPPETPPQPLDSASKPSALTQIQQPPPTNPSASSISSIPSSPTPPSPSL
NTNPNHPQYTRPVTSPATQQQQHISQPLGRPPPPAYSRPWQQHSSYTHFSSASSPLLSST
SAPASSSSSLPITGQQRGGMAIGVPASPIPNPSPSPSQHSPSAFPGSFGQQYGGLGRGTV
GMSEATSNTSVPQARMMQGTQGIGMMGTLGSSSQMRPTGMAQHQQRPTQSSLRPASSPST
QSPVTQNFQGHSLMRPSPIGSPSVHSTGASQQSLQGINQPWLSSTPQGKPPLPPPTYRPP
VNSPSMQQRPHIPPQHLSTPAATSQPQQQQSQQQHQPQEQLQQLRSPQQSLPHPHQPNRV
QGSVNQKVTSPVMPSQPPVAQPGNQTKTVSAEIEASDDRILGKRSIHELLQQIDPSEKLD
PEVEDILADIAEDFVESITTFGCSLAKHRKSDTLEAKDILLHVERNWNIRPPGFSSDEFK
TFRKPLTTDIHKERLATIKKSVMATEAANARNSFGHGTANARGGQAKTPANPLASTFNH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatcagccacggcaaagcacaacggcgtctcagccaccggaaacaccgccccagcca
ttggattcagcttcgaaaccgtccgcattgacacagattcaacaacctcctccaaccaat
ccgagcgcctcctccatttcctcaattccttcttcccctactccaccatcaccgtcgctc
aatacaaaccctaatcatcctcaatacacgcgtccagtgacatctccagcgacgcaacag
caacagcacatctcccagcctttggggcgacctcctccgccggcgtactcgagaccatgg
caacaacactcctcttacactcacttctcctccgcttcgtcgccattgttatcttccaca
tcagctccggcctcttcttcttcgtctttacctattactgggcaacaaagaggtggcatg
gcgattggcgttccagcttccccaattccgaatccttctccttcaccttctcagcattcg
ccttctgcttttcccggctcttttgggcagcaatacggtggattaggtcgtggaactgtc
ggaatgtcagaagctacgtccaatacaagtgttccccaggctaggatgatgcaaggaact
cagggaattgggatgatggggacacttggctcaagttcacaaatgaggccgactgggatg
gctcagcaccaacagagaccaactcaatcgtctctaaggccagcttcctccccaagtacc
cagtctcctgttactcaaaactttcaaggacatagccttatgagaccctcacctattggt
tctcctagtgtacactctactggtgcatcacaacaaagcttgcaaggcattaatcaaccg
tggttatcatctactccccaagggaagccgcctttgccaccccctacgtatagaccacca
gtaaattctccctccatgcaacaaagacctcatattcctccgcaacatctttccacgcca
gcagcaacttcacagcctcagcagcaacaatctcaacaacaacatcagcctcaagagcaa
cttcagcagttgagatctccgcagcagtctttacctcacccacatcagccaaaccgggtc
caagggtctgtaaatcagaaagttacttctccagtcatgccaagccagcctcctgtggct
caaccaggaaaccaaactaaaacagtttctgcagagattgaggcatctgatgatcgtatc
ctggggaaacgaagtatccatgagctacttcagcagattgatccgtcagagaaattggat
cctgaggttgaagacatccttgctgatattgctgaagattttgtagaatcaatcacaacg
tttggctgttctttagccaagcatagaaagtcagatactctagaggctaaggacatcttg
ctccatgttgaaagaaactggaatatcaggcctcctggttttagcagtgatgagttcaag
acatttcgaaagccactgacaacagatattcacaaagagcgacttgccactataaagaag
tcggtcatggcaacagaagcagcaaacgcaaggaattcgttcgggcatgggactgctaac
gcaagaggcggtcaggcaaagacacctgctaatcccttggcttcaactttcaatcactga
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integrated database retrieval system
