Capsella rubella (pink shepherd's-purse): 17896900
Help
Entry
17896900 CDS
T02984
Name
(RefSeq) polyadenylate-binding protein 3
KO
K13126
polyadenylate-binding protein
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03015
mRNA surveillance pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
17896900
09123 Folding, sorting and degradation
03018 RNA degradation
17896900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17896900
03041 Spliceosome [BR:
crb03041
]
17896900
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
17896900
mRNA cycle factors
Stress granule specific factors
17896900
Spliceosome [BR:
crb03041
]
Complex C
Other components
Complex C specific factors
17896900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_7
Nup35_RRM
RRM_occluded
YflT
Motif
Other DBs
NCBI-GeneID:
17896900
NCBI-ProteinID:
XP_006304937
UniProt:
R0IHF6
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MAAAVATGVAPATMVDQVPSPTAQTSVQISVSVPVSSPETVAVVADQTHPNSSLYAGDLD
PRVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDR
PIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKG
YGFVQFEKEESAQAAIDKLNGMLMNDKQVYVGHFIRRQERARDENAAPTPRFTNVYVKNL
PKEIGEEELRKTFSKFGVISSAVVMRDQSGISRCFGFVNFESTEAAASAVEKMNGISLGD
DVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEFG
NVTSSKVMLNPQGMSRGFGFVSYSSPEEALKALNEMNGKMIGRKPLYIALAQRKEDRRAH
LQALFSQIRAPGPMSGFHHPPGGPMPGPPQHMYVGQNGTSLVPSQPIGYGFQPQFIPGMR
PGSGPGNFIMPYPLQRGQPQAGPRMGFRRGATNMQHHIQQQQLMHRNSTPGMRYMNGNGN
GRNGMDSSVPQGILPPIMPLSRDGSSIPHQKAPLLPISKLTSSLASASPADRTRMLGEQL
YPLVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVLRLSVDPPDHDLG
FSTTD
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcggttgcaacgggtgttgcaccagcgactatggttgatcaggttccaagt
ccgacagctcaaacatcggttcagatttcggtttcagtaccggtttcatctccagagacg
gtggcagtagtggccgatcaaacacacccgaactcatcgctctatgcgggagatctagac
ccgagagtgaccgaagcacatctgttcgatttgttcaagcatgtagctaatgttgtctct
gttagagtttgtcgtgatcagaaccgccgatctttgggatatgcttacatcaatttcagt
aaccctaatgatgcttaccgtgcaatggaggctttgaactacactcccctctttgatagg
cctattcggataatgctctcaaaccgcgatccgagcacgcgattgagcggcaaagggaac
attttcatcaaaaatcttgatgcctcaatcgacaacaaggccttgttcgagacgttttca
agttttggaaccatcctctcatgcaaagttgcaatggacgtgactggccggtcaaaggga
tatggatttgtccagttcgaaaaggaggaatcggctcaagccgcaattgacaagcttaac
ggaatgctaatgaacgacaagcaagtgtacgtcggccacttcatcagacgccaagaacgc
gctcgggatgaaaacgccgcccctacaccacgtttcactaacgtgtacgtcaagaatctc
ccaaaggagattggtgaggaagagctacggaaaacgtttagtaaatttggagtgatatcg
agcgcggttgtgatgagggaccagagcgggatctcgaggtgtttcgggtttgtgaacttt
gagagtacagaagcagcagctagtgcggttgagaagatgaacgggataagcttgggggat
gatgtgttgtacgttgggagagcgcagaagaaatctgagagagaggaagagctgagaagg
aagtttgagcaggagaggataaaccggtttgagaaatctcagggagcgaatctgtatttg
aagaatcttgatgatagcgttgatgatgagaaactcaaggagatgttctctgagtttgga
aatgtaacttcttccaaggttatgcttaatccacaaggaatgagcagaggatttggtttt
gtttcttattccagtcctgaagaagccttaaaagccctgaatgaaatgaatgggaagatg
ataggaaggaaaccactgtacatagctcttgcgcagcgcaaagaagatagacgagcacac
ttacaggcgttgttttctcagattagagcaccagggccaatgtccgggttccatcaccca
ccaggtggaccaatgccaggtccacctcaacacatgtacgtaggccagaacggaacaagt
ctagtcccgtcccagcccattggatacggattccagcctcagttcatcccagggatgcgt
ccaggttctggtcctggcaacttcatcatgccgtatccgcttcagagaggacagcctcag
gccggtcctcgtatgggattcaggcgaggtgctactaacatgcaacaccacattcaacaa
caacaacttatgcatcgtaactcgacccctggaatgagatatatgaatggtaatggtaac
gggaggaacgggatggattcgagtgttccacaaggaatattgcctccaatcatgccattg
tcgagagatggttcttcaatccctcaccagaaagctcctctccttccaatatctaagctc
acttcttccttagcttctgctagtccagctgatcgcactcggatgcttggagagcagctt
tacccactagtggaaaggcatgaaccacttcacgtggctaaagtcacaggaatgttgttg
gagatggatcaagctgagatcctgcacttgatggagtcaccagaggcactcaagtctaaa
gtatcggaggctttggatgttcttaggctatctgttgatccacctgatcatgatcttggt
ttctctaccaccgactaa
DBGET
integrated database retrieval system
