Capsella rubella (pink shepherd's-purse): 17897090
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Entry
17897090 CDS
T02984
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X2
KO
K12821
pre-mRNA-processing factor 40
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
17897090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17897090
Spliceosome [BR:
crb03041
]
Complex A
U1 snRNP components
U1 related factors
17897090
Complex B
17897090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
17897090
NCBI-ProteinID:
XP_006306359
UniProt:
R0GTI0
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MANNPPQSSGTQFRPMVPGQQGQHFVPAVSQPFHPFGHVPPNVQSQPPQFSQPIQQQQLF
PVRPGQPGHITSSSQAVSVPYIHTNNILTSGSTQQQPNAPPMTGFATSGPPFSSSYSFVP
SSYPQQQPPSLVQPNSQMHVAGVPPAASTWPVPVNQSTSLVSPVQQTGQQTPVPLSTDPG
SSTPQSASDWQEHTSADGRKYYYNKQTKQSSWEKPLELMTPLERADASTVWKEFTTADGK
KYYYNKVTKESKWTIPEDLKLAREQAQLASEKRSLSEAGSTPLSHNAASSSDLAVSNATS
VVPSTSSTLPGHSSSPIQAGLAVPVTRPPSIAPVTPTSAAATDTEATAMKLDNLPSRSTD
DLNNGATAQNNEADNKEMLVNGKANLSPAGDKANVEEPMVYATKQEAKAAFKSLLESVNV
HSDWTWEQTLKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVEAEERRRRQKKAREEFVK
MLEECEELSSSMKWSKAMTLFENDERFKAVDRSRDREDLFDNYIVELERKEREKAVEVHR
QRMAEYRKFLETCDYIKAGTQWRKIQDRLEDDERCSCLEKIDRLIGFEEYILELEKEEEE
LKRVEKEHVRRAERKNRDAFRTLLEEHVAAGILTAKTYWLDYCIELKDLPQYQAVASNLS
GSTPKDLFEDVTEELEKQYHEDKSRVKDAMKSRKISMVSSWLFEDFKSAISEDLIPQPIS
DINLKLIYDDLVERMKEKEEKEARKLQRLAEEFTNLLRTLKEITAASNWEDTKALIEESQ
EYRSIGDESVSKGLFEEYTTSLQEKAKEKERKRDEEKVRKEKERDEKEKRKDKDKERREK
EREREKERGKERSKREESDGEAAVEASEGHKEEKRKGKDRDRKHRRRHHNSDEDVSSDRD
DREESKKSSRKHGNDRKKTRKHAYSPESDGENRHKRLKKDQREGSRRSGYDELEDGEVGE
DGEIRH
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataatcctccccagagttctggtacccagtttcggccgatggttccagggcag
cagggtcagcattttgttcctgcagtttcacagccttttcacccctttggacatgtacct
ccaaatgttcaaagtcagcctccacagttttctcagccgatacagcaacagcagctcttt
ccagtgagaccaggtcagcctgggcatattacatcatcgtcacaggctgtatcagttcct
tatattcatacgaacaatattctcacttctggatctacccagcaacagccgaatgcacct
ccaatgacgggctttgctacatctggacctccattttcttcttcatatagttttgtacca
tcatcttatcctcagcaacaaccaccatccttggtccaaccaaattctcagatgcatgta
gctggtgtccctccagcagcaagcacttggcctgttcctgtaaatcaaagtacatcactt
gtttcccctgtgcagcagactgggcaacaaacaccagtccccctttcaacagacccagga
agctcgactccgcaatctgcatctgactggcaggagcatacatccgctgatgggagaaag
tattactataacaagcagactaaacaatcaagttgggaaaaacctctagaactgatgaca
ccactcgagcgagcggatgcatctactgtatggaaggaatttacaacagctgatggaaag
aaatattattataacaaggttacaaaggagtctaagtggacaattccagaagatttgaag
ttagctcgggaacaagcccaactagctagtgaaaagaggtccctttctgaagctggatct
actcctctgtcccacaatgctgcatcctcctctgatctagcggttagcaatgcaacctct
gttgttcccagcacatcttcaacacttcctggacattcttcaagccctatccaagcaggt
ttggctgtacctgtcactcgtcctccctcaattgctcctgtaactccaacgtctgctgca
gctactgatactgaggctactgcaatgaaattggataatttaccatctcggagcacagat
gatttaaataatggagctacagcacaaaacaatgaggctgacaataaggaaatgttagtg
aacggaaaagcaaatctgtcacctgctggtgacaaagcaaatgttgaggaacctatggta
tatgctactaagcaggaggccaaagctgctttcaagtctcttttggaatctgtaaatgtt
cattccgactggacatgggaacagacattgaaagagattgttcacgataaaaggtatggt
gctttgaggactctcggtgagagaaaacaagcttttaacgagtatcttggtcaaaggaaa
aaagtggaagctgaggaaagacgaagaagacagaagaaagctcgggaagaatttgtcaag
atgctagaggagtgtgaagaactttcatcatccatgaaatggagcaaagcgatgacgttg
tttgaaaatgatgagcgctttaaagctgttgaccgttcaagagatcgtgaagatcttttt
gacaattatattgtggaacttgagaggaaggaaagagaaaaggcagtggaggttcatcgg
cagcgtatggcagagtaccggaagtttcttgaaacctgtgactatatcaaagctggtaca
caatggcgcaagattcaagatagactggaggatgatgaaagatgctcatgtcttgaaaag
atagatcgtctgattggttttgaggaatacattcttgaactagagaaggaagaagaggag
ctgaagagagtagagaaagaacatgtaaggcgggctgagagaaaaaaccgtgatgcattt
cgtacactattggaagaacatgtcgcagctggcatccttactgccaagacatactggttg
gattattgcattgagttaaaggacttgccccaataccaagctgttgcatctaatttgtct
ggctcaactccgaaagacttgttcgaagatgtcacagaagagttagagaaacagtatcat
gaggataagagtcgcgtaaaggatgctatgaagtcaaggaagatttccatggtctcctct
tggctgtttgaagattttaaatctgccatttcagaagatctcattcctcaaccaatatca
gacataaatttaaagcttatatatgatgacttggttgagagaatgaaggaaaaagaagaa
aaagaggccagaaagcttcagcgtctggctgaagaatttaccaatctgttgcgcactctc
aaggaaataaccgcagcttcaaattgggaagataccaaagcactgattgaagaaagtcaa
gagtacagatcgattggagatgaaagtgttagcaaagggttatttgaggaatacacaacg
agtttacaagaaaaggcaaaggagaaggagcgtaagcgtgatgaggaaaaggttagaaaa
gagaaggaaagggatgagaaagagaagcggaaagacaaagataaggagagaagggaaaag
gaaagggaacgtgaaaaagagaggggaaaagagaggagtaaaagggaagaatcagatggc
gaggctgctgtagaagcgagcgaaggtcacaaagaggagaaaagaaagggaaaagatcga
gacagaaaacatcggagacggcatcataattctgatgaagatgtcagttctgatagagac
gacagagaagagtcgaagaaatcctcccgtaaacatggtaatgatagaaagaaaacaaga
aagcacgcatactcgcctgaatcagacggtgaaaaccggcataaaagactgaagaaggat
caacgggagggtagtcgtcgaagtggttatgacgagctagaggatggagaagttggggag
gatggcgaaatccgacattaa
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