KEGG   Capsella rubella (pink shepherd's-purse): 17897597
Entry
17897597          CDS       T02984                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    17897597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crb03019]
    17897597
   03041 Spliceosome [BR:crb03041]
    17897597
Messenger RNA biogenesis [BR:crb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     17897597
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     17897597
Spliceosome [BR:crb03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    17897597
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 17897597
NCBI-ProteinID: XP_006307616
UniProt: R0IDG2
LinkDB
Position
Unknown
AA seq 422 aa
MDMLKKRKLDDNGIGMLNDGVIGAVSSRLMPQDARKIIERFSTDQLLDILQEAIVRHPDV
LEIVRSTADSDISQRKLFIRGLAAETTTEGLRSLFSNYGDLEEAIVILDKVTAKSKGYGF
VTFKHVDGALLALKEPSKKIDGRVTVTQLAAAGNQGTTNSHVSDISMRKIYVANVPFDMP
ADRLLNQFLAYGDIEEGPLGFDKITGKSRGFALFVYKTAEGAQAALAEPMKVVDGKNLQC
KLAIDGKKGKPPGQDGGAGVGHGHGHGDGMGMVPPPGPYGVAGGGHGGPGGLGGYGGYSG
GQAPHHMNSTPSSMGVAAAGGAGAYGGAYGGHYSAYGGAGTGGYGGLGAGSMGVSGGGYG
PGSGSGAYRMPPSSMSGGGYPESGHYGHSSASAYPGQHQPVGSSPVPRVPLGGMYPNVPP
NY
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggatatgttgaagaaacgaaagctcgatgataatggaatcgggatgctaaacgacggt
gtcatcggcgctgtttcgtctcgattgatgccacaagacgcgaggaagattatcgagcgg
ttctctactgatcagcttctcgatatcctgcaggaagctattgtgcggcatccagatgtc
ctagaaatcgttagatcaaccgcggattccgatatctctcagaggaagctcttcatccgt
ggactcgcggcggagacaacgacggaaggtcttcgttcgcttttctccaattacggagat
cttgaagaagctattgtgattctcgataaggttactgctaaatccaaagggtatggtttc
gttacttttaagcatgttgatggggctctgcttgctttgaaagagccgtctaagaagatt
gatgggcgcgttacggttacgcagcttgcggcggctgggaatcaaggtaccacgaactca
catgtttcagacatatcgatgaggaagatttatgtggcgaatgtgccgtttgatatgccg
gcggataggttattgaatcagtttttggcttatggggatattgaggaaggtcctttgggt
tttgataaaatcactggtaaatcaaggggttttgcgctgtttgtttacaagactgcagaa
ggtgctcaggctgcacttgctgaacctatgaaggtggttgatggaaagaatttgcagtgt
aaattggctattgacggtaagaaaggaaagccaccaggtcaagatggtggtgctggggtt
ggacatggtcatggtcatggtgatggaatgggtatggttcctcctcctggaccttatggt
gtagctggtggtggtcacggtggacctggtgggctgggtggttatggtggatattcagga
ggacaagcaccgcatcacatgaattccacaccgtcttcaatgggtgttgctgctgctggt
ggagcaggtgcctatggaggggcatatggtggtcattacagtgcatacggtggtgcagga
actgggggttatggtggtcttggtgcaggatcaatgggcgtttctggtggtggttatggg
cctggttctggaagtggggcgtatagaatgccacccagttcgatgtctggtggtggttat
ccagagagtgggcactatggacattcatcagcgtcagcatatcctggacaacatcagcct
gttggttcctctccggtgccaagagttcctcttggaggaatgtaccccaatgttccacca
aattactga

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