Capsella rubella (pink shepherd's-purse): 17899990
Help
Entry
17899990 CDS
T02984
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
17899990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17899990
Membrane trafficking [BR:
crb04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
17899990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
17899990
NCBI-ProteinID:
XP_006303705
UniProt:
R0IIA5
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MASVPPENGVDGDDEREEEEEEEEEEEEEAEENGDEAEEEPRLKYQRMGGNVPSLLSNDA
ASCIAVAARMIALGTHDGTVHILDFLGNQVKEFRSHTAPVNDLNFDTEGEYIGSCSDDGS
VVINSLFTDDEKMKFDYHRPMKAISLDPDYTKKQSKRFVAGGLAGHLYMNSKKWFGFRDQ
VLHSGEGPIHSVKWRGSLIAWANDAGVKVYDTAKDQRVTFIEKPRGSPRPEALLPHLVWQ
DDTLLVIGWGTSVKIASIKSDQHKPGTYRQIQMSSLNQVDIVASFQTSYYISGIAPFGDS
LVILAYIPVEGDGEKEFSTTNTLSRQGNAQRPEIRIVSWNNDELTMDALPVHGFEHYKAK
DYSLAHAPFPGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHINWLLQHGFHEKAL
AAVEAGEGRTELIDKVGAGYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAQLRQ
LPVLVPYMPTDNPRLKDTVYEVALVALATNPSYHKELLSAVKSWPRSVYSALTVISAIEP
QLNTSSMTDALREALAELYVIDGQYQKAFSLYADLLNPEVFDFIEKYSLHEAIRGKVVQL
MLLDSKRATVLFIQNRDLIPPSEVVPQLLKAGKKCDSRFYLYLYLHALFEVSHDTGKDFH
DMQVELYAEYDTKMLLPFLRSSQHYKLEKAYELCVKKDFLREQVFVLGRMGNAKQALAVI
INKLGDIEEAVEFVSMQHDDDLWEELIKQCLNKPEMVGLLLEHTVGNLDPLYIVNMVPNG
LEIPRLRDRLVKIVTDYRTETSLRHGCNDILKTDIVNLLVKCFNEARRGVCLSKEEDDSR
AKREDNNRSFSQKMAVDKSLSIKMTEVKSKTRGDTRCCMCFDPVSVRGDTVVVFFCCHAY
HMTCLMDAAFSSSNNKTTKGSSEYEYSYDNSVDEEEEEEDEEEDEDGDGGRPGRSRLRCI
LCTTAAAASAR
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggttccgcctgaaaacggcgtggacggagatgacgaaagagaggaagaagag
gaggaggaagaggaagaggaagaagaagcagaagaaaacggagatgaagctgaggaggag
ccacgcctcaagtatcagcggatgggtggcaacgttccttcgttgctatctaatgacgct
gcttcctgcatcgctgttgcggccaggatgatcgcccttggtactcacgacgggaccgtg
catatcctcgatttcctcggcaatcaggttaaagaatttcgttcccacactgctccggtt
aatgacctcaactttgacactgagggagagtatataggaagctgttccgacgatggttct
gttgttataaacagccttttcactgatgatgagaagatgaagtttgattatcatcgtccc
atgaaggccatttccttggacccagattacactaaaaagcaatcaaagaggtttgtagcc
ggtggcttggcgggtcacttgtatatgaactccaagaagtggtttggttttagagaccag
gtgctgcattctggggaaggtccaatccattctgtgaaatggagaggaagtctcatcgcc
tgggctaatgatgctggtgttaaagtttatgatacggccaaagatcagcgtgttacattt
attgaaaaaccacgaggaagccccaggcctgaggctttgcttccccacttggtttggcag
gatgacaccctcctggtgattggttggggaacatcagttaaaattgcatcaattaaatca
gaccagcataaacctggaacgtataggcagattcagatgtctagtctaaaccaagttgat
atcgtggcatctttccaaaccagctattatatttcagggattgctccttttggtgattct
cttgtcattcttgcgtatatacccgttgaaggagatggtgagaaggaatttagcaccacc
aatactctatcgcgtcagggaaatgcccagagacctgaaatacgcattgtatcatggaac
aatgatgaacttacgatggatgctcttcctgtacacggctttgagcattacaaagcgaaa
gactattcccttgctcatgctcctttcccaggtagtagctacgctgggggacagtgggca
gctggtgatgaaccactatactatattgtttctccaaaggatgttgtgattgccaaaccc
agggatgctgaagatcacattaactggcttttgcaacatggattccatgaaaaagcccta
gcagctgttgaggctggtgaaggacgaaccgaactaattgataaggtgggagctgggtat
cttgatcatctgattgtggaaagaaaatatgcggaagcagcctctttatgccccaaattg
ttaagaggatctgcttcagcctgggagaggtgggttttccattttgctcaactacgccag
ctaccggttcttgttccatatatgcctacggataacccaaggcttaaggatactgtgtat
gaggttgctctagttgcactggcaaccaacccctcataccacaaggagcttttgtcagct
gtgaaatcttggccacgttcagtatattctgctttgactgttatctcggcaatagagcct
cagctgaacacatcttcaatgaccgatgccctcagagaggcgctggcagagctgtatgta
attgatggacagtatcagaaggccttctccctatatgctgatcttctcaatccagaagtg
tttgatttcattgagaaatacagcttgcatgaggcgattcgtggaaaggtggtccagtta
atgttgcttgattccaagcgtgccactgtcctatttattcaaaatagggatttgattcct
ccatctgaagttgttcctcaacttctgaaagctggcaaaaaatgtgattcaagattttac
ttgtacttatatctgcatgcgttattcgaagtcagtcatgatactgggaaggattttcat
gatatgcaggtagaactatatgcagaatacgatactaagatgctgcttccattcctacgt
agcagtcaacattacaagttagaaaaggcatatgaactttgtgtcaagaaagatttttta
agagagcaagtgtttgtcctggggaggatggggaatgcaaaacaagctcttgcagtcatc
ataaataaactgggagatatagaagaagctgtggaatttgtgtccatgcagcacgatgat
gatctatgggaagagttgattaaacaatgtctaaacaagcccgagatggtgggcttgctg
ttggagcatacggttggcaaccttgatcctctttacattgtaaatatggtcccaaatggc
ttggaaatacctcgattaagggatcgattggtcaaaattgtaacagactacagaactgag
acatctcttagacacggttgcaatgatattctcaagacggatattgttaatcttctggtc
aaatgcttcaacgaggctaggcgtggggtctgcctaagcaaagaagaagacgattcccgt
gcgaagagagaagacaataatcgctcattctcgcagaagatggcagtagataaatcttta
agcataaagatgacagaggtgaagtcaaagacaaggggggatacacggtgttgtatgtgc
ttcgacccggtctcggtaagaggggacactgtggtggtcttcttctgctgccatgcttac
cacatgacgtgcctcatggatgctgccttcagcagcagcaataataagacaactaaaggt
tcctcggagtatgaatacagctacgataacagtgtggatgaagaggaagaggaagaggat
gaggaagaagatgaagatggtgatggaggcagacctgggcggtcgcgtttacggtgtata
ttatgtactactgccgccgctgcttccgctcggtag
DBGET
integrated database retrieval system
