Chlamydomonas reinhardtii: CHLRE_03g189000v5
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Entry
CHLRE_03g189000v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CHLRE_03g189000v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cre03400
]
CHLRE_03g189000v5
DNA repair and recombination proteins [BR:
cre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
CHLRE_03g189000v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Motif
Other DBs
NCBI-GeneID:
5717493
NCBI-ProteinID:
XP_042926284
LinkDB
All DBs
Position
3:complement(5800980..5808595)
Genome browser
AA seq
1074 aa
AA seq
DB search
MLKRGRGGFTAPRRIGDPAISAGSSQGASAAPATTQSAARHDEEDLENVPAASLAPPCAG
KAAAPASRAEPGYRAPLAQAPANTNTGAYGFEPTAPAIKRPPGFQRPAMVPTKLPRTAPA
SVAAASACVRGANASAGPGGSAGGGAAGSGSSGPAMEEVFGVLFTKTALLAKKKASKQFA
DGVMVTFEDGTAVLYDQDSKVITKGRYKAFGKASASDLTFELGNWHAEMDKQLSVEDFRS
GACFVSNTCSTSAAAAAAAPAPRKPALSSFKPHVPVGGGTVAGRPAGAGGPSGSGRAAAA
AGVLPTGLHDPHAPGAVVLNTVQWKGGSGKLRDGRPVTPVTVDPYLGRLLRPHQAEGVRF
MYEAVMGLRTADKTGCILADEMGLGKTLQVITLAWTLLRQGPEGRPVAGKVLVVTPATLV
DNWGREVKKWLGSERLQALCLQQSPTAKQQILEFRHGVHQKMMITSYETLRKHAKDLAGV
FDLLVCDEGHRLKSVGGNKTIDALLSLGCQRRVLLTGTPVQNDLQEFYALLSFVAPEALG
SAALFNRVYGIPITRSQEGTATAEDKELGAARSSELKAKVSAFILRRTQALLAKHLPPLA
SLTLFCRPTEQQVSLYTAVLRSKAVASLLGGGGGGGEDNTLAVITALRKVANHPDLLLGG
GDAADGEGRVNVSSCLPDFSADFAATGTAQSAGKMQVLSELLRGIGAVGERCVVVSTSTA
ALDLVGRLVCRPLGLSTVRIDGATSVDGRQIIVDNFNKLNMGQVFLLSTRAGGAGLNLVG
ANHLVLYDSDWNPAMDQQAMARIWRDGQTKPCHVYRMLTTGTIEEKVYQRQLMKADLASA
TMVGGGAGGGGKSGGGKFTREELRALFSLNTATASDTRDLLPPGRVAGLRWLEPEEFAAP
ADSPLAVAVATGLVTCINQMAAHSLEPEEAVAAAPGCEGAAGGAAAGSGSGAQPMGAEES
LQREGAGVGKPARAARRARAQAQAVVESEDSMDGDFEDGKGAQESEEEVDVEEEAVEEAP
APAPPSQRRRLLQSQGAGQAGQQEEEVVVAAAAGADSGLPAAHDNPDELNLEDW
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcgcgggcgcgggggcttcacggctcctcggcgcatcggcgacccagccatc
agtgcgggttcgtcgcaaggggcctcggctgccccagcgaccacgcaaagcgctgcgcgc
cacgacgaggaggacttggagaatgtgccggcagctagcctcgcaccgccgtgcgccgga
aaggcagctgcgccagccagccgtgccgagcctggatatcgcgcacccctcgcacaagcg
cccgcgaacaccaataccggcgcgtatgggtttgagccaactgcacctgcgattaaacgt
cccccggggttccagcggccggccatggtgccgacaaagttgccgcgcacggcaccggca
tcagttgccgctgcatcggcatgcgtgcgcggcgcaaacgcgagcgcggggcctggtggc
agtgctggcggtggtgcggcgggcagcggaagctcgggcccggcaatggaggaggtattc
ggagtgctcttcacgaagaccgcgctccttgcaaagaagaaggccagcaagcagttcgcg
gacggcgtgatggtgacattcgaggatggcaccgccgtcctgtatgaccaggacagcaag
gtgatcaccaaaggccgctacaaggcctttggaaaggcctcggcgtcagacctgaccttt
gagctgggcaactggcacgctgagatggacaagcaattgtccgtggaggacttcaggagc
ggcgcatgcttcgtcagcaacacctgttccaccagcgcggcggcggcagcagcagctcct
gccccgcgcaagcccgccctaagcagcttcaagccgcacgtgccggtgggaggcggtact
gtcgccgggcggcctgcaggagccggcggcccatctgggtcgggccgtgcggcggcggca
gcgggcgtgctgcccaccggcctgcacgacccacatgcgcccggcgccgtggtgctgaac
actgtgcagtggaagggcggcagcggcaagctgcgcgacgggcgccccgttacacctgtc
acggttgacccctacctgggccggctgctgcggccgcaccaggcggagggcgtgcgcttc
atgtacgaggcggtgatggggctgcgcacagccgacaagaccggatgcatcctggccgac
gagatggggctgggcaagacgctgcaggtcatcacgctagcgtggacgctgctgcggcag
ggacccgagggccggccggtggcgggcaaggtgctggtggtgacgccggcgacgttggtg
gacaactggggccgcgaggtcaagaagtggctgggctcggagcgcctgcaggcgctgtgc
ctacagcagtccccgaccgccaagcagcaaatcctggagttccggcacggcgtgcaccag
aagatgatgatcactagctacgagacgctgcgcaagcacgccaaggacctggcgggcgtg
ttcgacctgctggtgtgtgacgaggggcacaggctcaagtccgtgggcggcaacaagacc
atcgacgcgctgctgagcctgggctgccagcgccgggtgctgctgactggcacgcccgtg
cagaacgacctgcaggagttctacgccctgctgtcgtttgtggcgcccgaggcgctgggc
agcgcggcgttgttcaaccgggtgtacggcatccccatcacccgcagccaggagggcacc
gccaccgccgaggacaaggagctgggcgcggcgaggtccagcgagctgaaggccaaggtg
tcggccttcatcctgcgccgcacgcaggcgctgctggccaagcacctgccgccgctggcc
tcgctcacgctgttctgcaggcccaccgagcagcaggtgtccctgtatacggcggtgctg
cgctccaaggcggtagcgtcgctgctgggcggcggcggcggtggcggtgaggacaacacg
ctggcggtcatcaccgcactgcgcaaggtggccaaccaccccgacctgctgctcggcggc
ggtgacgcagcagacggcgagggccgtgtcaacgtcagcagctgcctgcccgacttcagc
gctgacttcgccgccacagggaccgcacagtccgcaggcaagatgcaggtgctgagcgag
ctgctgcgcggcattggcgcggtgggcgagcgctgtgtggttgtgtccaccagcacggcg
gcgctggacctggtgggccggttggtgtgcaggccgctggggctgagcacggtgcgcatc
gacggcgccaccagtgtggacggccgccagatcatcgtggacaacttcaacaagctcaac
atgggccaggtgttcctgctgtccacgcgcgcgggcggcgccgggctcaacctggtgggc
gccaaccacctggtgctgtacgacagtgattggaacccggcgatggaccagcaggccatg
gcgcgcatctggcgggacggccagaccaagccgtgccacgtgtaccgcatgctcaccacc
ggcaccatcgaggagaaggtgtaccagcgccagctcatgaaagccgatctggccagtgcc
accatggtgggcggcggcgccggcggcggcggcaagagcggcggcggcaagttcacgcgc
gaggagctgcgcgcgctgttctcgctcaacaccgccaccgcctccgacacgcgcgacctc
ctgccgccgggccgcgtggcggggctgcgctggctggagccggaggagtttgctgcgccg
gccgacagcccgctggccgtggcggtggccacaggtctggtcacctgcatcaaccagatg
gcggcgcacagcctggaaccggaggaggctgtggcggcggcgccaggctgcgagggggcc
gccggcggcgccgctgccggctccggcagtggcgcacagccgatgggggcggaagagtcc
ctgcagcgggagggcgcaggcgtgggcaagccggcgcgtgccgcgcggcgcgcgagagcg
caggcgcaggcggtcgtggagagcgaggacagcatggacggcgatttcgaggatgggaag
ggcgcacaggagtctgaagaagaggtggacgtggaggaggaggcagtggaggaggcgccg
gcgccggcgccgccctcacagcggcggaggctgctgcagagccagggtgcgggacaggcc
gggcagcaggaggaggaggtggtggtggctgccgccgccggcgctgacagcgggctaccc
gccgcgcatgataacccggatgagctgaacctggaggactggtag
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