Chlamydomonas reinhardtii: CHLRE_06g278269v5
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Entry
CHLRE_06g278269v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cre03036
]
CHLRE_06g278269v5
Chromosome and associated proteins [BR:
cre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
CHLRE_06g278269v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Motif
Other DBs
NCBI-GeneID:
5723604
NCBI-ProteinID:
XP_042923888
LinkDB
All DBs
Position
6:complement(4374208..4385763)
Genome browser
AA seq
1931 aa
AA seq
DB search
MAGPRFKLDLVTYGDPVALLPLPVAVAPTQASLLPSGSEALDAQLARDPQVLQQLQAALT
STDISYVHPINTDVATTHNPSSLLARQLFASNSNLFLYGIAADPEASALAATPGRSGTGV
VVAHNSQPDASVRKEAAPASAHTGKKRARRAPKQEVYVMTRDEAQVAAAKLSAFLESLLA
TAARAAEAAGPDSDADNSEQEDDVAVPGRADQDGCSGRPRGRPAHRFRAEALRGLHQELL
AAQSHGYLRLMGTPRLKQLLLALNETAGSGVSRVLAEDDEPKSAPVARVAACLEAVLCEL
VVLATPGLPTELYLEQLLERAVDAARHHLQVNVLAVHDVRFKRLYRAALMDEGDEPAAKV
TKARGRPRAAAGHHAPRWCAPLLGQLEQVLALLSEVVGLVRVGVSGLIPLVRMSQQALTV
ESLSTLHYRALGLAVSMFKFYPQHRNTVMDEFVQSVLTHLSPGKHFPRHFPLPSADAPTS
IQMTSAMVMQLVQVVAELPAVDAGSQAAEMCVNTSIGWSDYFWSEVFKKLPTARAAKAEA
ATDLRAWVEALVDDLLAAVPLPEWPAASVLLRRLVLAIQGERGLKSADATARLVCVDLLG
QLSQRLCGLAKEADAPEATRAVAALLDAAKATAADPKAAEAADRGELLQQLLLEHLAEHH
PAAGASAAAASTGAHTAAAGAGVAGAVADATSVSVSARQMIACLMLSAHTKAAKAGLPKG
RELGAKQSSEAILRYRQVCERQRSCLGASTSGLPAVSREAATLLGRALLADSMLGRARPT
LLRWLADAGGGGKARQEVQAAAVRAKAIKLLGGAIEADVRVLQMQEVQEGIRGALGDDSV
LVREAAVDLIGKHISRSAELAAQYYEILTRASEDPGLTVRKRAIRLLWECCVRCPDFVHR
SDALLRIVSRATDSEETMRALVTKICSEIWFLPKFTIEYEDEVSHVARRPEQRAAQLGEV
VAAVYAKSAFVSLPFHPGVPVVATVRGILGEDGKADSEAVRAGAREVADALLSRALELQG
AADEPPQPEAADAAAGSLSPSDELFRCLLALHVLCLADVKLLHKASDPQRAVRCLAPYIK
ELPGRVEDASSRRKAEQLVVVLAILGSCLAPLRHLEEALATELAADLVSIITRVHHVQAV
SVAGQCLCTLARILPAHKAGVREQAAQYFLLLEGDYLKKVANDPKLTVERFRMYPRFLYI
LGMLCRYGADVLDEPAEGSKHPSCSAALGLLLKYYNMYADSVRIQETVLQAMGFIFIARP
ALAVDVREVQPILAGALEPRAPASLKCRCLTSLTELLRVEEDAMLARQAAARREAAAAHT
ASTMPEAETRALARRNGEGDTGSVTSGLIQMLWERIRALATDVTPAASAAAASGQTPPST
PSGSAVSAAGAAVRRRALELMEVVIRGGIVVPWEAVSALTALATDPERDTAGRALTCLRG
VVAANTAFVAGQVPQGVAEAYAFHCRLAALERPGQPPALDQSRPLMEGLGLVWSHVFQPD
RQLKSKFLNALLKPMDDACCLASGTAARSDPHLLSFLAYVVAELPYTRMDELLAVLLRLN
DILSRRAEGVLGRFQELRRLADARQLQDADAAGPSTSTAGTARPDPTGTPPPAGSAAAGA
RLTLGGAQGLLATVKAALGVSLMLLLKQYLRMAYDVATERVAKYDPSGPQRKVEEKLNAV
HSGKHRFNAAKLRLDVAAQLAAAASNRHGALGASGSAVKAAASVPRSAAKSGQGQGGPEG
AASAPVLSAAEAAAAEAAVVSGLRPGLDELYKVLKTLMKQDEADYRQRMAEADAAALGEG
VPDDASPGEGGGGAAGGMDVAAMMAAPSAEGSAKPPSAARGRGRGRGSRGGRAGSAATSA
GGGEVASRGRGRGRGRGRGQPASGGRGGRKRKSSARDGSDVDSDGEEDGGSGEDAADTYR
PQPRRRLEAAL
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtccaaggtttaagcttgacctggtcacctatggcgacccggtagcgctgctg
ccgctgccggtggcggtggcgcccacccaagccagcttgctgccctcgggcagcgaggcg
ctggacgctcagcttgcacgggacccgcaagtcctgcagcagcttcaagcagcactgaca
tcgacggatatctcctacgtacaccccatcaacacggatgtagctacgacccataaccct
tccagcctgttggctcggcagcttttcgcctccaactctaacctcttcttatatggcatc
gccgccgacccagaagccagtgcgctcgcggcgacgccagggcgctctggtacgggtgta
gttgtggcgcacaacagccaacccgatgcatctgtgcgtaaggaggcggcaccggcgtcg
gcacatactggcaagaagcgggcgcgcagggcgcctaagcaggaggtgtacgtgatgact
cgggacgaggcacaggtcgcggcagccaagctcagcgccttcctggagtccttgctggcc
acagcggcgcgcgccgccgaggccgcgggtcctgacagtgacgcagacaactcggaacag
gaggacgatgtggcggtgccggggcgggcggaccaggacggttgtagcgggcgacctcgt
ggccggccggcgcatcgcttccgcgctgaggctctgcgcgggctgcaccaggagctgcta
gcggcccagagccatggctacctgcggctgatgggcaccccgcggctgaagcagctgctg
ctggcactgaatgagacggccgggtcgggcgtaagccgcgtgctggcggaggacgatgag
cccaagtctgcacctgtggcccgcgttgccgcctgcctggaggctgtcctatgtgagctg
gtggtgctggccacgcccggcctgcccaccgagctgtacctggagcagctgctggagcgg
gcggtggacgcggcgcggcaccacctgcaggtcaacgtgctggcggtgcacgacgtgcgc
ttcaagcggctgtaccgcgcggcgctcatggacgagggcgatgaaccggcagctaaggtc
accaaggcgcgagggagaccgcgtgcggcagccggccaccacgcccctcgctggtgcgcg
ccgctgctgggccagctggagcaggtgctggccctgctgtcggaggtggtggggctggtg
cgggtgggcgtgtcgggcctcatcccgctagtgcgcatgtcgcaacaggcgctcaccgtg
gagtcactcagcacgctgcactaccgcgcgctaggcctggctgtgtccatgttcaagttc
tacccgcagcaccgcaacacggtgatggacgagtttgtgcagagcgtgctcacgcacctc
agcccgggcaagcactttccacgccacttcccgctaccgtctgcggacgcgcccaccagc
attcagatgacgagcgcaatggtgatgcagctggtgcaagtggtggcggagctgccggcg
gtggacgcaggcagccaggccgccgagatgtgcgtcaatacctccattggctggtccgac
tacttctggtcagaggtcttcaagaagctgccgacggcgcgcgccgccaaggccgaggcc
gccaccgacctgcgcgcctgggtggaggcgctggtggacgacttgctggccgccgtgccg
ctgcctgagtggccggcggcctcggtgctgctgcggcgcctggtgctggccatacagggc
gagcgcggcctcaagagcgcggatgccaccgcgagactagtgtgcgtggacctgctgggg
cagctgtcacagcggctgtgcggcctggccaaggaggcggatgcgccagaggccacgcgg
gcggtggcggcgctgctggatgcggccaaggctacggcggcggaccccaaggcggcggag
gcagcggaccgcggcgagctgttgcagcagctgctgctggagcacctggcagagcaccac
ccggccgcaggagccagcgcagcggcggccagcacgggcgcccacacggccgcggcgggg
gctggggtggcgggcgcggtggccgacgccaccagcgtgtcagtcagcgcgcggcaaatg
attgcctgcctcatgctgtccgcccacaccaaggcggccaaggcagggctgcccaagggg
cgcgagctgggcgccaagcagtccagcgaggccatcctgcgctaccggcaggtctgcgag
cggcagcgctcatgtctgggcgcctccacgtcaggtctgccggctgtgtcacgggaggcc
gccacgctgctgggccgggcgctgctggcggactcgatgctgggccgtgcccgccccacg
ctgctgcgctggctggcggacgcgggcggcggcggcaaggcgcggcaggaggttcaggcg
gcggcagtgcgcgccaaggccatcaagctgctgggcggcgccatagaggcggatgtgcgc
gtcctgcagatgcaggaggtgcaggagggcattcgaggtgcgctcggggatgacagcgtc
ctagtgcgcgaggcggcggtggacctgatcggcaagcatattagccgcagtgccgagctg
gcggcgcagtactacgagatcctcacgcgcgcctcggaggaccccggcctcaccgtgcgc
aaacgcgccatccggttgctgtgggagtgctgtgtgcgctgcccggactttgtgcaccgg
agcgatgcgctactgcgaattgtgtcgcgggcgacggactcggaggagaccatgcgcgcg
ctagtcacaaagatctgctccgagatctggttcctgcccaagttcacgatagagtatgaa
gacgaggtgtcacatgtggcgcggcggcccgagcagcgcgccgcgcagctaggagaggtg
gtggcggcggtgtacgccaagagcgccttcgtcagcctgcccttccacccaggcgtgccg
gtggtggccactgtgcgcggcatcctgggcgaggacggcaaggcggacagcgaggcggtg
cgggcaggggcgcgcgaggtggcggacgcgctgctgtctcgcgcgctggagctgcagggc
gcggcggacgagccgccgcagcccgaggctgccgacgcggcggctggctccctgtcgccc
tctgatgagctcttccgctgcctgctggccctgcacgtgttgtgccttgcggacgtgaag
ctgctgcacaaggcctccgacccacaacgggcggtgcgctgcctggcaccctacatcaag
gaactgccgggccgcgttgaggacgcctcctcccggcgcaaggccgagcagctggtggtg
gtgctggccatcctgggcagctgcctcgcgccgctgcggcacctggaggaggcgttggcg
accgagctggcggcggacctggtcagcatcatcacgcgcgtgcaccatgtgcaggccgtg
agtgtggcggggcagtgcctgtgcactctggcgcgcatcctgccggcgcacaaggcgggt
gtgcgggagcaggcggctcagtacttcctgctgcttgagggagactacctcaagaaggtc
gccaacgaccccaagctcacggtggagcggttccgcatgtacccgcgcttcctgtacatc
ctaggcatgctgtgccgctacggcgccgacgtgctggacgagccggccgagggctccaag
caccccagctgcagcgccgcgctgggccttctgctcaagtactacaacatgtacgccgac
agcgtgcgcatacaggagacggtactgcaggccatgggcttcatcttcatcgcgcggcct
gcgctggcggtggacgtgcgcgaggtgcagcccatcctggccggcgcgctggagccccgc
gcgcccgcctcgctcaagtgccgctgcctgacctcgctcacagagctgctgcgggtggag
gaggacgccatgctggcccgccaagcggcggcgcggcgcgaggcggcggcggcgcacacg
gcgtccaccatgccggaggccgagacgcgcgcactggcgcggcgcaacggcgagggcgac
acggggtccgtcaccagcggcctgatccagatgctgtgggagcgcatccgggcgctcgcc
acggacgtgacgcccgcagcgtcggccgcggcggccagcggtcagacgccgccgtccacg
cctagtggcagtgccgtgtcggcagccggcgcagctgttcggcggcgcgctctggagctt
atggaggtggtcatccgtggcggcatcgtggtgccctgggaggcggtgtcggcgctgact
gcgctggccaccgaccccgagcgcgacaccgctggtcgcgcgctgacctgcctgcggggc
gtggtggcggccaacaccgctttcgtggcgggccaggtgccgcagggcgtggcggaggcg
tacgccttccactgccggcttgcggcgctggagcggcccggccagccgccggcgctagac
cagagccggccgctgatggaggggctggggctggtgtggagccatgtgttccagcccgac
cgccagctcaagagcaagttcctcaacgcgctgctcaagcccatggatgacgcctgctgc
ctggccagtggcacagcggcgcggtcggacccgcacctgctgtccttcctggcctacgtg
gtggcggagctgccctacacgcgcatggacgagctgctggcggtgctgctgcgactcaac
gacatcctcagccgccgagcggagggcgtgctgggccgcttccaggagctgcggcggctg
gcggacgcgcggcagttgcaggatgctgacgcggcggggccctccacgtcgaccgcggga
acagccaggccggatccgaccgggacgccgccgccggctgggtcggcagccgctggcgcg
cgcctgacgctgggcggtgctcagggcctgttggcgactgtgaaggcagctctgggcgtg
tcgctgatgttgctgctgaagcagtacctccgcatggcctacgatgtggccacagagcgt
gtggccaagtacgacccgtccggccctcagcgcaaggtggaggagaagctgaacgcggtg
cacagcggcaagcaccgcttcaacgccgccaagctgcggctggacgtggccgcgcagctg
gcggcagccgccagcaaccgccacggggcgctgggcgccagcggctcggcagtgaaggcg
gcggccagcgtcccgcgcagcgccgccaagagcggccaggggcagggcgggccagagggc
gcggcatcggcgccagtgctgtccgctgcagaggcggcggccgctgaggctgcagtggtg
tcgggtctccggcccgggctggacgagctgtacaaggtgctcaagacgctcatgaagcag
gacgaggcggactacaggcaacgcatggccgaggccgatgcggcggcgctgggtgagggc
gttccggacgatgcctccccgggggaaggcggcggcggggctgcgggcggcatggacgtg
gcagccatgatggcagcacccagcgccgagggcagtgccaagccaccatcggcagcaagg
ggccgtgggcgggggcgcggctcacgcggtggcagagctggcagtgctgcgacgtcagct
ggcggcggcgaagtcgcctcccgggggcgaggacgcgggagagggcgcggccgcggccag
ccggcctccggcgggcggggcgggcgcaagcggaagagttctgcacgtgacggcagcgat
gtggacagcgacggggaggaggacggcggcagcggcgaggacgcggccgacacgtaccgg
ccgcagcccaggaggcggctggaggcggctctgtga
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