Chlamydomonas reinhardtii: CHLRE_06g284750v5
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Entry
CHLRE_06g284750v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K03267
peptide chain release factor subunit 3
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CHLRE_06g284750v5
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cre03019
]
CHLRE_06g284750v5
03012 Translation factors [BR:
cre03012
]
CHLRE_06g284750v5
Messenger RNA biogenesis [BR:
cre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CHLRE_06g284750v5
Translation factors [BR:
cre03012
]
Eukaryotic type
Release factors
CHLRE_06g284750v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
5720986
NCBI-ProteinID:
XP_042924024
LinkDB
All DBs
Position
6:complement(5489516..5495845)
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AA seq
574 aa
AA seq
DB search
MADSWEEHAAPPPPPPSAPAPALNPNSMIFVPGRGFVPASSQAAPAAPPPPPPPPPAPPA
EPAPQPPKEPEPEPEPEPEPEPEPVAAPSVPAPSEPSPPAPEPAAAAPAPAAVAVVEEPV
APVDESAVMKAFQECLAEEPRDHLNIVFIGHIDAGKSTLAGQILFLTGGVDKRTIEKYER
EAKEKNREGWYMAYIMDTNEEERVKGITVEVGRAHFETDKKRYTVLDAPGHKNYVPNMIQ
GACQADVAILVISARKGEFETGFERGGQTREHAQLAKTLGVTRLIVVVNKLDCPSVAVDG
KWDRARFDQIVNGLTPFLKQCGYNMKKEVTFLPLAALYGHNIRDAVSKELCDWYDGETLF
SVLDHMEPVERNPLEPFRMPIVDRWKDMGTIVMGKSEAGFVRVGDLLQIMPNKLRVKVDG
VYRDEKETQSARCGENLRLRLSGCEETDISPGFVLSSVKSPVPVVTQFEAQLVIVELLEH
NPIFTVGYKSMLHIHTACEECEVSKLVAEIDPKTKEQKKAKYIKQGGICICRITVDKPIC
IEAFGDVPSLGRFTLRDEGRTIAIGKVVKLPKVH
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggccgactcgtgggaggagcatgcggctcctcccccgccccctccgtccgcgcccgcg
ccggccctgaacccgaacagcatgattttcgtgcccgggaggggcttcgttcctgcttca
tctcaagcagcgcctgctgctcctccacctcctcccccgccgcctcctgcacctccagcg
gagcccgctcctcagccgcccaaggagcccgagccggagcccgagccggagccggagccg
gagccagagccggtcgccgcgccatcggtcccggcgccatcggagccgtctcccccggcg
ccggagcccgctgctgctgctcccgctcctgccgcggtcgcagtcgtggaggagcccgtc
gcccccgttgatgagagcgctgtgatgaaggcgttccaggagtgcttggcggaggagccg
cgcgaccacctaaacattgtgttcattggccacatcgacgctggcaagtccacactggcg
gggcagatcctgttcctcacgggcggtgtggacaagcgcacgattgagaagtacgagcgt
gaggccaaggagaagaaccgcgagggctggtacatggcatacatcatggacaccaacgag
gaggagcgagtcaagggaatcaccgtggaggtgggccgcgcccacttcgagacggacaag
aagcgctacacggtgctggacgcgcccggccacaagaactacgtgcccaacatgatccag
ggcgcctgtcaggcggacgtggccatcctggtcatctccgcgcgcaagggcgagttcgag
acgggctttgagcgcggcggccagacgcgcgagcacgcgcagctggccaagacgctgggc
gtgacgcggctgattgtggtggtcaacaagctggactgcccctccgtggcggtggacggc
aagtgggaccgcgctcgcttcgaccagatcgtgaacggcctgacgcccttcctgaagcag
tgcggctacaacatgaagaaggaggtgaccttcctgccgctggcggcgctgtacggccac
aacatccgggacgcggtgtccaaggagctgtgcgactggtacgacggcgagacgctgttc
tcggttctggaccacatggagcctgtggagcgcaacccgctggagcccttccgcatgccc
atcgtggaccgctggaaggacatgggcaccatcgtcatgggcaagtccgaggcgggcttc
gtgcgcgtgggcgacctgctgcagatcatgcccaacaagctgcgtgtcaaggtggacggc
gtgtaccgcgacgagaaggagacgcagtcggcccgctgcggcgagaacctgcgcctgcgc
ctgagcggctgtgaggagaccgacatctcgcccggcttcgtgctcagctccgtcaagagc
cccgtgcccgtggtcacgcagtttgaggcgcagctggtgattgtggagctactggagcac
aaccccatcttcacggtgggctacaagtccatgctgcacatccacaccgcctgcgaggag
tgcgaggtgtccaagctggttgcggagatcgaccccaagaccaaggagcagaagaaggcc
aagtacatcaagcagggcggcatctgcatctgccgcatcaccgtggacaagcccatctgc
atcgaggcattcggcgacgtgcccagcctgggccgcttcacgctgcgtgatgagggccgc
accatcgccattggcaaggtggtcaagctgcccaaggtgcactaa
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