Chlamydomonas reinhardtii: CHLRE_06g303200v5
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Entry
CHLRE_06g303200v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
Organism
cre
Chlamydomonas reinhardtii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tcp10_C
Phage_holin_2_1
Motif
Other DBs
NCBI-GeneID:
5716932
NCBI-ProteinID:
XP_042924359
LinkDB
All DBs
Position
6:7892707..7903170
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AA seq
2574 aa
AA seq
DB search
MRAGMAGVWVLLLVAAAHQAAAAGNGNGNGNNAATTTTTTTTTVVPVGSTSTAATIQPLY
TLGNNGCPINSYNYCIAKSKSGCAACGTVNGVNSTGPTTGNNGCKTIDGFGQNVQACRMP
FGAITVRFPNGTKYTEDFGGIVPQSEICTGSIAATPVFAYAGTGEENRVGTLVTYRTQAG
WLVATVRLDCPYLSWFSYNGKDAPGATIVDAYNSVYNLTTKQTTANVTTRRRNLLQANKA
STTTCPSLTTDGSVLYGNGNGQYQNGKPDARSYIALSYKVDGAVTAFSIPTYRYQNNGDG
SNNVEDNGGDGWYSCYTFMHQVSFGSKNTDTCATINMNIGLFMSQIFMVSSDGKQCAVKA
KTSIVTPPTTTTPTTSVVDPPVTITTVTATPPTPSPSPSPSPPSPAPSPPPSPAPSPLPP
SPTPSPPPSPAPSPRPPSPTPSPPPSPPPSPPPSPTPSPPPPVPVPSPSPPPSPTPSPPP
SPPPSPRPPSPTPSPPPPSPRPSPPSPAPSPPPSPPPSPAPPTPGSVTCAANGGNCDKLV
QTTDQNGQGKCWVNAATGEYAFCMYSDPGNNTAVGVDPNGNINTYTGVTTPNEQNNGGPI
LPPSPPPPSPSPPSPPPPSPKPPSPTPPPSVSPSPPPFPSPPPSPSPPSPPPPSPPPPSP
SPPPPSPPPPSPPPTPSPSPPPSPPPSPSPPPPSPPPPSPEPPSPEPPSPSPPPPSPGTD
SKDTRSEGQVQIIKSTGEDEILPNIDSPPLIPSDTQPSTGPTSAAVEGTGSFTEVVPDCV
ENCAIVGGPGKVEGGSAVGVPVEELKNVDTNGGMSVPPTVPEVPVPTATVVTNTDGSTTT
TYPNGTVVIEWNDGTTKTTTTDGTTSTTKVDGTEIVTTPNGTETTTKPNGEVITKYPNGT
IVDEKPGGTTITTTPDGKTVTESPGGTVTTVTPTPSGGTNTTVEQPNGSTSTTIKDSTGS
TTSSSTKQPDGTNSTSTTTSGGTTTVVTYPNGTIDTTNPDGKEIISYPNGTTVTKNTDGS
TSTTTSSGTTTVTNPDGSTKVTTSDGTSTTTYSNGTVVTVKTDNTTTYTYPNGTTSTTTP
DTTVTVKYPDGSSTVTQPGGTTIVTTTDKTVTVTEPDGTKTVITVDGTKTVTEPDGTKTV
EKPDGQVTIVEPDGTVTIKTPDGKVTVTEPNGVTTVTTTNGTTTITDPNAGTVKEIPPSG
NPVTTTTSDGTKTVVDGTTGTTTTTTPGGDVTVTTKDGTTNTNRTDGVVIVTTPDGTTTT
TVPGGTTVTEFINGTKIVDDKSTGTTTVSYPNATTVTTTKDGTITTVDADGTTNTTTSTG
TTTIWYPDGTTVIDPPGVGNVTVIYINGTVEIIAPNGSESITYPNGTSKDVLPNGSTITT
YPNGTVITTTPGGTPQITQPPTTTTTTTDNSKVTTLPDQTTVTTKPDGSTQIQTQEGVNI
TTDKTGVTTVTPPTTTPEVTPPVTVVKPDGSSTQKDPDNTVTTQDTTGKVTTVIPSNDPT
VPPEVIVNNPATGETIRTVPEIPIVPDVVTPTPSPSPSPSPSPSPSPSPSPSPTPTPPVE
APVTVITVRDSNTDTPLVAIITSNGDTTVQTSNGTVVTTEVETGQTTTVTTDGIVKVQDP
STGTTSVTNTTTGQTTTTIAVPVPAPEPTGPFCSCPPTVANGATCSSGTPLEWYTRTVKP
DGSFQDNLVATQCVDAPTVTNADTGAVVFSFCWRRACITQGKTLDNEALFFKAPAVALPA
KYQASSSYGIALTILRPSCATNAAATGHTVAANFMPLDFNEAETVETTQASGGLLNFDAK
IVAPGGCDDTGATYMLNIMAISLVETVYNQCPKHAIPDGTNGNADCTFPLVPVYLDITDA
NFVKDPSFPTYKQCVDPCNFDLFSGELACSYCWSFGQLPPQFSSNYFVIELRNVTKYNID
LMAGGTYRSLVNQPQLIMPDGKKVEVTFTLNPKDEIKGKGAKAVVFTTNGNYTLPDGVAP
VSSIGDIRGDFTKTTKYGGIHDVNMQIKVPRGLDDQSVSVQMFGSPNPPPPEVLCPCPTP
LNSEGDCDGTLTKIKLYPSDNSTTFVEGCIPSPYWDGAKGELMISHCWRASCLENPPFFT
PTAAKPNSPFYRKDYDIEMLLTDKYNIAAVPSGKHELSFFKPKVVDMFVQFQYVDRARPT
ETAQFSSRDGQVQSITVPAGGIAKMGLRMKVPFNPIYDINSASANLNTDPSRLIPPPPPP
LAITNYSYTINRNAQVLRSTVLIDDLLNVTTAASNGSDAASGAFNFTQVKSTFARDFSND
IDMSMSGYIMSQDISFPDYGLVQSCTSADVQAVINKIAAKYGVSPDSIAASCQYDYKKPD
AVTTVTAAHRRRRGRSLQQTTVTTPAVCYPRISITVSMPLGVPMDGNVTKALAAATTAAD
AVYDAVGTDACYVPTGAESRVGTVVAFTTTNSKATCEYITQAFANAGNFTADMIRTYNCG
EENPKKPYPPGLIALWCVLGVLGVVVIGVVTYLGVSWRKRRAANLQFVNQEGAISGGLPK
VAPSPSSLAMGGNDYKYSTKAAAVAEGLQRPDTPTRYSPRAAVPAIERNRVVPV
NT seq
7725 nt
NT seq
+upstream
nt +downstream
nt
atgcgagccggtatggccggcgtgtgggtgctgctcctcgtcgcagcagcccatcaggct
gcggcagcagggaatggcaacggcaacggcaacaatgcagccacaacgacaacaacaaca
acaacaacagtagttcctgtgggcagcacgagtacagcggccacaatccagccgctgtac
acgctgggcaataatggttgcccaatcaacagctacaattactgcattgccaagagcaag
tcaggctgtgctgcatgcggcaccgtcaatggcgtaaactctacgggcccgacgacaggc
aacaacggctgcaagaccattgatggtttcggccagaatgtccaggcctgccgtatgccc
ttcggtgccatcaccgtgcgcttccccaacggtaccaagtacacggaagatttcggcggc
atcgtgccccagtcggagatctgcaccggcagcattgccgccacccctgtgttcgcctat
gccggcaccggagaggagaaccgcgtgggcacgctcgtcacctaccgcacacaggctggc
tggctggtggcgaccgttcgccttgattgcccctacctgtcatggttttcctacaacggc
aaggacgctccgggcgccacaattgtggatgcctacaacagcgtctacaacctgaccacc
aagcagaccaccgcaaacgtcaccacccgccggcgcaacctgctgcaggccaacaaggcc
tccactaccacttgcccttcgctcaccactgacggttccgtcctgtacggcaacggcaac
gggcagtaccagaacggcaagccggacgctcgcagctacatcgctctgtcgtacaaggtg
gacggcgctgtcactgccttcagcatccccacgtaccgctaccagaacaacggcgacggc
tccaacaacgtggaggacaacggcggtgatggctggtacagctgctacacgttcatgcac
caggtgtcgttcggttccaagaacacggatacttgcgccaccatcaacatgaacatcggg
ctgttcatgtcccagatcttcatggtgtcgtcggacggcaagcagtgcgcggtgaaggcc
aagacctccatcgtgacgccgcccaccacgacaaccccgaccacctcggtggttgacccg
ccggtcaccatcaccaccgtgactgcgacgccgccgaccccgtcgccgtcgccgtcgccc
tctccgccctcgcctgcgccctctcctccgccctcgcccgcgccctccccgctccccccg
tccccaacgccctctcctcctccgtccccggcgccctctcctcgtcccccctcgccgact
ccctcgcctcccccgtcgcctcctccctctcctcctccgtcgcccactccctcgccgcct
cccccggtgccggtgccgtcgccctcgcctccgccgtcgcccacgccctcgccccctccc
tcgcctcctccctcgccccgccctccctcgcctaccccgtcgcctcctcccccctcgcct
cgtccctcgcctccctcgcctgctccctcgccgccaccctcgccgcctccctcgcccgct
cctcccaccccgggctcggtcacctgcgctgccaacggtggaaactgcgacaagctggta
cagaccactgaccagaacggccagggcaagtgctgggtgaacgctgcgactggcgagtac
gccttctgcatgtattcggaccccggcaacaacaccgctgtgggtgtggaccccaacggc
aacatcaacacctacaccggcgttactactcctaacgagcagaacaacggtggccccatc
ctgccgccctcgcctcctcccccgagcccgtcgccccccagcccccctccgccgtcgccc
aagcctcccagcccgactcctcctccctcggtgtcgccctctcctcctccgttcccctct
cctcccccgtcgccctcgccgccctcgcctcctcctcccagccccccgcccccgtcgccc
tctcccccccctccctcgcctccccctccctcgcctccgcctacccccagcccctcgccg
cctcccagccctcctccctccccctcgcctcctcctccctcgccccctcctccctcgccc
gagcccccgtcgcccgagcctccgtcgccctcccctccccccccgagccccggcactgac
agcaaggacactcgcagcgagggccaggtccagatcatcaagtcaaccggcgaggacgag
atccttcccaacatcgatagccctcccctcattccttcggacacccagccatctactggt
cctacctctgccgccgttgagggcacgggtagcttcaccgaggtggtgcccgactgtgtt
gagaactgcgccatcgtcggcggtcccggcaaggtcgagggcggctctgccgtgggtgtg
cccgttgaggagctgaagaacgtggacaccaacggcggcatgtctgtgcctcccaccgtg
cccgaggtccctgtgcccacggccaccgtggtcaccaacaccgacggctccaccaccacc
acctaccccaacggcaccgtggtcattgagtggaatgacggcaccaccaagaccaccacc
acggacggcacgaccagcaccacgaaggttgacggcactgagattgtgaccacccccaac
ggcaccgagaccactaccaagcccaatggcgaggtgatcaccaagtaccccaacggcacc
atcgttgacgagaagcctggcggaaccaccatcaccaccacacctgacggcaagaccgtg
actgagagccccggcggcaccgtcaccaccgtcacgcccactcccagcggcggcaccaac
accaccgtcgagcagcccaacggctccacctcgaccactatcaaggactccaccggcagc
accaccagctcctccaccaagcagcccgacggcaccaactccacttcgaccaccacctct
ggcggcaccaccaccgtggtcacttatcccaacggcaccattgacacgaccaaccctgac
ggcaaggagatcatttcctaccccaacggcaccaccgtgaccaagaacaccgacggctcg
accagcaccaccaccagctccggcaccaccaccgtcaccaaccctgacggctcgaccaag
gtcaccacgtctgacggcacctccaccaccacctattccaacggcaccgtcgtgacggtc
aagactgacaacaccaccacctacacctaccccaacgggaccaccagcaccacaactccc
gacaccactgtcaccgtcaagtaccccgatggctcctccaccgttacccagcccggcggc
accacgattgtgacgaccaccgacaagaccgtcacggtcactgagcctgatggcaccaag
actgtgatcacggttgacggcaccaagaccgtcactgagcctgatggcaccaagaccgtt
gagaagccggacggccaggtcaccatcgttgagcccgatggcactgtcaccatcaagacc
cctgacggcaaagttaccgtcactgagcccaatggcgtgaccaccgtcaccacgaccaac
ggcacgactaccatcaccgaccctaacgctggcaccgtcaaggagattcctcccagcggc
aaccccgtcaccaccaccacctccgatggcaccaagactgttgtggacggcaccaccggc
actaccaccaccacgacacctggcggcgacgtgaccgtgaccaccaaggacggcaccacc
aacaccaaccgcacggacggtgtggtcattgtcaccacccctgatggcaccaccaccacc
accgtccccggcggcaccaccgtcaccgagttcattaacggcaccaagattgttgacgac
aagagcaccggcaccacgaccgtcagctaccccaacgccaccaccgtgaccaccaccaag
gatggcacgatcaccaccgttgatgccgacggcaccaccaacaccaccacctccaccggc
accactaccatctggtaccccgatggcactaccgtcattgacccgccgggtgtcggcaac
gtgaccgtgatttacatcaacggcactgtcgagatcattgccccgaacggcagcgagagc
atcacctaccccaacggcaccagcaaggatgtgctgcccaacggctccaccatcaccacc
taccccaacggcaccgtgatcaccaccactcctggtggcacccctcagatcacccagccg
cccaccaccactaccaccaccactgacaactccaaggtcaccacgcttccggaccagacc
acggtcaccaccaagcccgatggctcaacccagatccagacgcaggagggtgtcaacatc
accacggacaagactggtgtcaccacggtcacgccgcctacgaccactcctgaggtcacg
cccccggtcaccgttgtcaagcctgacggcagctccacccagaaggaccccgacaacacc
gtcaccacccaggacaccaccggcaaggttacaaccgtgatcccgtccaacgaccccacg
gtgcctcccgaggtcatcgtgaacaaccccgccaccggcgagaccatccgcactgtgccc
gagatccccatcgttcctgatgtggtcacccccacccccagccccagcccgagccccagc
ccgagccccagcccgagccccagccccagccccagccccactcccaccccgcctgtggaa
gccccggtcaccgtcatcaccgtccgtgacagcaacaccgacacaccgctggttgccatc
atcacctccaacggcgacaccaccgtgcagaccagcaacggcaccgtcgtgaccaccgag
gtcgagactggccagaccaccacggtcactactgacggtattgtcaaggtccaggacccc
agcactggcaccacgtccgtcaccaacacaactactggtcagaccaccaccaccattgcc
gtgcccgtgccggcgcccgagcccactggccccttctgctcctgcccgcccacggttgcc
aatggcgctacctgcagctctggcaccccgctggagtggtacacgcgtaccgtgaagccc
gacggctccttccaggacaacttggttgccacgcagtgcgtcgacgcccccactgtcacc
aacgccgacaccggcgccgtggtgttctccttctgctggcgtcgcgcctgcatcacccag
ggcaagacgctggacaatgaggccctgttcttcaaggcgcctgcggtggccctgcccgcc
aagtaccaggcgagctccagctacggcattgcgcttaccatcctgcgccccagctgcgcc
accaatgccgccgccaccggccacaccgttgccgccaacttcatgcccctggacttcaac
gaggccgagaccgtggagaccacccaggcttctggcggtctgctgaacttcgacgccaag
attgttgcccccggcggctgcgatgacaccggcgccacctacatgctgaacatcatggcc
atctcgctggtggagaccgtgtacaaccagtgccccaagcacgccatccccgacggcacc
aacggcaatgccgactgcacgttccccctggtgcccgtgtacctggacatcacggacgcc
aacttcgtgaaggatcccagcttccccacctacaagcagtgcgtggacccctgcaacttc
gacctgttcagcggcgagctggcttgctcgtactgctggtcgttcggccagctgccgccg
cagttctcgtccaactactttgtgattgagctgcgcaacgtcaccaagtacaacattgac
ctgatggccggcggcacctaccgctctctggtcaaccagccccagctgatcatgcccgac
ggcaagaaggtggaggtgacgtttaccctgaaccccaaggacgagatcaagggcaagggc
gccaaggccgttgtcttcaccaccaacgggaactacaccctgcccgatggcgttgccccg
gtcagcagcattggcgacattcgcggtgacttcaccaagaccaccaagtacggcggcatc
cacgacgtgaacatgcagatcaaggtgccccgcggcctggacgaccagtccgtctccgtg
cagatgttcggcagccccaacccgccgccgcccgaggtcctgtgcccctgccccacgccg
ctcaactcggagggcgactgcgacggcaccctcaccaagatcaagctgtacccgtcggac
aactccaccacctttgtggagggctgcatcccgtcgccctactgggacggtgccaagggc
gagctcatgatctcgcactgctggcgcgcgtcgtgcctggagaacccgccgttcttcacc
cccactgccgccaagcccaactccccgttctaccgcaaggactacgacattgagatgctg
ctcacggacaagtacaacatcgctgctgtgccctcgggcaagcacgagctgtcgttcttc
aagcctaaggtggtggacatgtttgtgcagttccagtacgtggaccgcgccaggcctacg
gaaactgcccagttctcgtctcgcgacggccaggtgcagtccatcaccgtccccgccggc
ggcattgccaagatgggcctgcgcatgaaggtgcccttcaaccccatctacgacatcaac
tcggcgtcggccaacctgaacaccgacccgtcgcgcctcatcccgcctcctcctcccccg
ctggccatcaccaactactcgtacaccatcaaccgcaacgcccaggtcctgcgctccacg
gtgctcattgacgacctgctaaacgtgaccaccgccgcctccaacggcagcgacgccgcc
tccggcgccttcaacttcacccaggtcaagtccaccttcgcgcgcgacttcagcaacgac
atcgacatgagcatgtcgggctacatcatgtcccaggacatttccttccccgactacggc
cttgtgcagtcgtgcacgtccgccgacgtgcaggccgtgatcaacaagatcgcagccaag
tacggcgtgagccccgactccattgccgcctcttgccagtacgactacaagaagcccgac
gccgtcaccactgtgaccgcagcgcatcgccgccgccgtggccgcagcctgcagcagacc
accgtcaccacgcccgccgtgtgctacccccgcatctcgatcaccgtgtcgatgccgctg
ggcgtgcccatggacggcaatgtgaccaaggccctggccgccgccaccaccgccgctgat
gccgtctacgacgctgtcggcactgacgcgtgctacgtgcccaccggtgctgagagccgt
gttggcaccgtggtcgccttcaccaccaccaacagcaaggccacctgcgagtacatcact
caggccttcgccaacgccggcaacttcaccgccgacatgatccgcacctacaactgcggc
gaggagaaccccaagaagccctacccgcccggcctcattgctctctggtgcgtgctcggt
gtcctcggtgttgtggtcattggcgtggtcacctacctgggcgtgtcttggcgcaagcgc
cgtgccgccaacctgcagttcgtcaaccaggagggcgccatcagcggtggcctaccgaag
gttgcaccgtcgccctcgtctcttgccatgggcggcaacgactacaagtactcgacgaag
gctgcggcggtggctgaggggctgcaacgccccgacacgccaacccgctactcgccgcgc
gcggcggtgcccgccattgagcggaaccgcgttgtgccggtatag
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