Chlamydomonas reinhardtii: CHLRE_12g537100v5
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Entry
CHLRE_12g537100v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cre
Chlamydomonas reinhardtii
Pathway
cre00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHLRE_12g537100v5
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cre01007
]
CHLRE_12g537100v5
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cre03016
]
CHLRE_12g537100v5
Enzymes [BR:
cre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
CHLRE_12g537100v5
Amino acid related enzymes [BR:
cre01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CHLRE_12g537100v5
Transfer RNA biogenesis [BR:
cre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CHLRE_12g537100v5
Prokaryotic type
CHLRE_12g537100v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
GST_C
GST_C_2
tRNA-synt_1e
GST_C_3
GST_C_6
CENP-H
Motif
Other DBs
NCBI-GeneID:
5718473
NCBI-ProteinID:
XP_042918764
LinkDB
All DBs
Position
12:complement(6261272..6277558)
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AA seq
1299 aa
AA seq
DB search
MHTIQAPPGHPGQPAALIAAAFLEQPLTIDAPDPDLTAPVLKAGDHAVHGSGEALRYLAS
HNAAGSKLYPAELKASIDKWLELGAVLEAAALAWVEPFASKADDEARASSRAAATTALEQ
LQVDLLDGKKYLVGDSLTLADVAVAAALTPLFESALGRGLQAQLAAVLGWLAGCQALPQF
QKGLGTPGLCAAEGEWVEPKKDAGKEGGKKKKGKGGAAPAAAGDASGSTPATPAATEPLD
PEKAAKKAAKDAEKAAKMAKFAAKQAAAEAAKAVKPADTAAEDKKAKEKAEAEAKKKADA
EEVAALIEAARATPKGAKKELPGAMYKAYHPRAVEAGWYEWWEECGFFKPDLQSDKPPFV
IVIPPPNVTGALHIGHALTNSIQDTITRWRRMSGYNAVWVPGTDHAGIATQTVVEKKLQR
EKGVTRHDLGRDAFLGQVWEWVDQYGHRIHDQLRRLGSSVDWSRSVFTMDDKLSRAVLEA
FVRMYEGGCIYRDNRLVNWCCRLKTAVSDIEVDYIDIPKRTLMNVPGYAEPVEFGLLTSF
AYPLEDGSGEIVVATTRPETMLGDTAVAVHPEDPRYTSMHGKFVVHPVSGRRIPIICDAE
LVDMAFGTGAVKVTPAHDPNDFTTGKRHSLEFINIFDDNGLINAQGGPFEGQPRFKARVT
VVDMLKEKGLFRGTSDNPMRLGLCSRSKDVIEPVLKPQWWVSCKDMAAASCQAVRDGSLE
IIPKEFEATWFRWLENIRDWCISRQLWWGHRIPAYYVVFEGEDDKASGRPGMPSEDMGRW
VVGRTKEEAEAAARAKYPDRAGAIKLVQDEDVLDTWFSSGLFPFSVFGWPEGTPDLDKFY
PTSLLETGHDILFFWVARMVMMGIQLTGKVPFKQVYLHAMVRDAHGRKMSKSLGNVIDPL
HVIEGISLQGLHDTLAGGNLDPKEVERAKSGQQADFPEGIEECGTDALRFALCAYTAQAR
DINLDIKRVVAYRHWCNKLWNAIKFAMMNLGEGFAAPERPLDAEAPGFPPACRWVLSRLN
VAVTSMVQAMEAYDFATATQRAYAFWQNEVCDVFIEVMKPVMAFDDADPKAAEIKKLTRQ
TLWTCLDSGLRLLHPFMPFVTEELWQRLPRSPQLAQYASIMLAPYPTPTAGWDAPAAERA
MEYALAIVSTCRRLRNDYGITKQKPHIYVAVTDADKAAALRSLSLEVATLSSSSAVTLLA
AGEAAPLGCSVAIVDEATTLHMLLKGILDPALEIAKLDKKSAELIGRLEALKKKMTSPAY
EKTPDDVKAADAERLAKAEAELAQAEAATTAMKALLAAS
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaatccaagcccctccggggcaccccggtcaaccagcagcgctgatcgctgct
gctttcctggagcagcccctgaccatcgacgccccggacccggatctgacggcgccggtg
ctgaaggcgggcgaccacgcggtgcacggcagcggcgaggcgctgcgctacctggccagc
cacaacgcggccggcagcaagctgtacccggctgagctcaaggcctccattgacaagtgg
ctggagctgggtgcggtgttggaggcggcggccctggcctgggtggagcccttcgcgagc
aaggccgacgacgaggcccgcgcctcctcccgcgccgccgccaccaccgctctggagcag
ctgcaggtggacctgctggacggcaagaagtacctggtgggtgactcgctgaccctggct
gacgtggcggtggcggccgccctgacgccgctgttcgagtcggcgctgggccgggggctg
caggcccagctggcggccgtgctgggctggctggcgggctgccaggcgctgccccagttc
cagaaggggctgggcacgcccggcctgtgcgccgctgagggcgagtgggtggagcccaag
aaggacgccggcaaggagggcggcaagaagaagaagggcaagggcggcgccgcgcctgct
gctgccggcgacgccagcggctccacgcctgccacccccgccgccacggagcccctggac
ccggagaaggccgcgaagaaggccgccaaggacgcagagaaggctgccaagatggccaag
ttcgcggccaagcaggccgcggcggaggccgccaaggccgtcaagcccgccgacacggcc
gcagaggacaagaaggccaaggagaaggcggaggcggaggcaaagaagaaagccgatgct
gaggaggtggctgcgctcatcgaggccgcccgcgccacccccaagggcgccaagaaggag
ctgccgggcgccatgtacaaggcctaccacccccgtgccgtggaggcgggctggtacgag
tggtgggaggagtgcggcttcttcaagcccgacctgcagtccgacaagccgcccttcgtc
atcgtcatcccgccgcccaacgtcacgggcgccctgcacatcggccacgccctcaccaac
tccatccaggacaccatcacccgctggcggcgcatgagcggctacaacgcggtgtgggtg
cccggcaccgaccacgccggcatcgctacgcagacggtggtggagaagaagctgcagcgc
gagaagggcgtcacacgccacgacctgggccgcgacgccttcctgggccaggtgtgggag
tgggtggaccagtacgggcaccgcatccacgaccagctgcggcgcctgggcagctccgtg
gactggagccgctccgtgttcaccatggacgacaagctcagccgcgctgtgctggaggcg
tttgttcgcatgtacgagggcggctgcatctaccgcgacaaccgcctggtgaactggtgc
tgccgcctcaagaccgccgtgtccgacattgaggtggactacatcgacatcccaaagcga
acgctgatgaacgtgcccggctacgccgagccggtggagtttgggctgctgacgtcgttc
gcctacccgctggaggacgggtcgggggagatcgtggtggccaccacccgccccgagacc
atgctgggagacacggccgtggcggtacaccccgaggacccgcgctacacgtccatgcac
ggcaagttcgtggtgcacccggtgtcgggccgccgcatccccatcatctgcgacgccgag
ctggtggacatggccttcggtaccggcgccgtcaaggtgaccccggcgcacgaccccaac
gacttcaccaccggcaagcgccacagcctggagttcatcaacatctttgacgacaacgga
ctcatcaacgcgcagggcggccccttcgagggccagccgcgcttcaaggctcgtgtgaca
gtggttgacatgctcaaggagaaggggctgttccgcggcaccagcgacaaccccatgcgc
ctggggctgtgcagccgctccaaggacgtgattgagcctgtgctgaagccgcagtggtgg
gtgagctgcaaggacatggcggccgcctcctgccaggccgtgcgcgacggaagcctggag
atcatccccaaggagtttgaggcgacgtggttccgctggctggagaacatccgcgactgg
tgcatcagccgccagctgtggtgggggcaccgcatccccgcctactacgtcgtgttcgag
ggcgaggacgacaaggccagcgggcggccgggcatgcccagtgaggacatgggccgctgg
gtggtggggcggaccaaggaggaggcggaggcggcggcgcgcgccaagtacccggaccgg
gccggggcaatcaagctggtgcaggacgaggacgtgctggacacctggttcagctccggg
ctgttccccttctccgtgttcggctggcccgagggcacccccgacctggacaagttctac
cccaccagcctgctggagaccgggcacgacatcctgttcttctgggtggctcgcatggtg
atgatgggcatccagctgacgggcaaggtgcccttcaagcaggtctacctgcacgccatg
gtccgcgacgcacacggccgcaagatgtccaagtcgctgggcaacgtgattgacccgctg
cacgtgatcgagggcatcagcctgcaggggctgcacgacacgctggcgggcggcaacctg
gaccccaaggaggtggagcgcgccaagtccgggcagcaggcggacttcccggagggcatt
gaggagtgcggcacggacgcgctgcggttcgcgctgtgcgcctacaccgcgcaggcccgc
gacatcaacctggacatcaagcgcgtggtggcgtaccggcactggtgcaacaagctgtgg
aacgccatcaagttcgcaatgatgaacctgggcgagggctttgcggcgcccgagcggccg
ctggacgccgaggcgcccggcttcccgcccgcctgccgctgggtgctcagccgcctcaac
gtcgccgtgaccagcatggtgcaggccatggaggcctacgacttcgccaccgccacccag
cgcgcgtacgccttctggcaaaacgaggtgtgcgacgtgttcattgaggtcatgaagccc
gtcatggcctttgacgacgccgaccccaaggcggcggagatcaagaagctgacgcggcag
acgctgtggacgtgcctggactcgggcctgcgcctgctgcaccccttcatgccctttgtc
acggaggagctgtggcagcgcctgccgcgcagcccgcagctggcccagtacgccagcatc
atgctggcgccctaccccacccccaccgccggctgggacgcgcccgccgccgagcgcgcc
atggagtacgcgctggccatcgtgtccacctgccgccgcctgcgcaacgactacggcatc
accaagcagaagccgcacatctacgtcgccgtcacggacgcggacaaggccgccgcgctg
cgctccctgagcctggaggtggccacgctcagcagcagcagcgccgtcacgctgctggcg
gcgggcgaggcggcgccgctgggctgctccgtggccatcgtggacgaggccaccacgctg
cacatgctgctcaagggcatcctggacccggcgctggaaattgccaagctggacaagaag
tccgccgagctgattgggcggctggaggcgctgaagaagaagatgacctcgcccgcctac
gagaagacgcccgacgacgtcaaggccgcggacgccgagcgcctggccaaggcggaggcg
gagctggcgcaggcggaggcggccaccaccgccatgaaggcgctgctggcggcgtcgtag
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