Chlamydomonas reinhardtii: CHLRE_12g550900v5 Help Entry CHLRE_12g550900v5 CDS       T01039                                  Name (RefSeq) uncharacterized protein   KO K12385   Niemann-Pick C1 protein Organism cre  Chlamydomonas reinhardtii Brite KEGG Orthology (KO) [BR:cre00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03265 Virion - Ebolavirus and Lyssavirus     CHLRE_12g550900v5  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02000 Transporters [BR:cre02000]     CHLRE_12g550900v5 Transporters [BR:cre02000]  Solute carrier family (SLC)   SLC65: NPC-type cholesterol transporter    CHLRE_12g550900v5 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  NPC1_N Patched Sterol-sensing Folate_rec RskA DUF2798 Motif Other DBs NCBI-GeneID:  5719660 NCBI-ProteinID:  XP_042919000 LinkDB All DBs Position 12:8168206..8182487 Genome browser AA seq 1698 aa AA seqDB search MSMRSFWDVLVLVAVVGASVRSQPEPAPAPVYPGPSPSPSPSPSPSPSPSPSPTPSWLTR DHSPGMCATYGTCGHRRDGDPLPCAANVPAAPPEEALATALQAVCPSLWAAAGGPAGRYC CTADQVQRISSDTAKAMPFIVGCPACRRNFLQLWCVTTCSPDQASFANVTAVQTAADTNS STAVSELEYWVSEQYSSQLYDSCKDVKFGAANVPAMSFIGGGATNGQAWLDFLGTLKDKR FPPIGSPIQINFRPENATPPGLSPLADRVVACGDNAFRCSCSDCPAAQGCAQPAPEPPAP PPACHVGSLRCLTFALIWVYAAVAACVLAGYVLGLGAGSGAAAAAAAAAAEAEASTGAEA GAGGGKERAAWGVAAGWEQDGLAGGGGGEAGASGLRQPLLHGGAGASGGGGTGSGGGAGG GGGGGGHRPPRVERLLQRGYYRLGLFVGYHPVAVAAVGVALAGLCCLGLMRFRVETDPQR LWVGPESQAAREKAAYEASFGPFYRVEQMILATQPPPPPSRQPPPAASGAPPPPASSSSA AAAAAAILSGPHLQLLFDMQQLVDELEAPIRRPDGSEGVVRLRDVCFKPFGDECATQSVL QYWRLNRTLYETEQARPAGSPGRMTPEYCFTHWYTECRSAFQAPIDPHVVLGGFPVGDQF TTYTAGATSFVTTYPVSSEPALRAAAAAWEAAFIDLAAGRLGDMAAAAGLSLSFSTERSV QDELTRESRADAVTVAASYGFMLLYIAAALGSLPPLWPVWWAARGRGLRAAAAWLRRGAL TSRGGLGLAGVAIVALSVAGALGLVSAAGLWCTLIIMEVIPFLVLAVGVDNMFVLAHAMG KQDHALPPAERLALSLAAAGPSITLAAACETAAFALGGLLTSMPAVRNFSLAAAAAVALD FGLQVTVFAALLVLDVRRLQSRRLDCLPCIQLQPEQLQPGGSSASSSASRRRRRGGGSPY RPSTAMMMERHYGGTKDVLDEDELSYEQRQQQEYGSVTREDDRPPYIGPSSDGEVDEHSY WSLQRVLQAYFEWLHAPLLSRPAAQVAVLLAFAASACVCLALLPQLQVGLDQAVALPRDS YLQPYYRDVLAQLRVGPPLLLVVEDLDLDPAARQVEALCGVAGCDPDSLVNRVSAAARDP GRTYLAAAAASWLDDFMSWLSPDLPACCRARNAATGANALLVGDPYAPTSSFQSLATTAA PAFGPAASPSITGAAAGSYCPPPDQPPCSTNASTCAGCRTCVQTAFEGGRPSVSQFQSYL PWFLGARPSEGCAKGGVGAYSSALQRADPDDPTSVAGLLPEAGWREGGWGEKAGWGEEEE EQDEQEEGQEEGQEEEAGATAADLAARLRRRRQLLKQRRGGGAATTTISADGGGKSGGKS GGGGGGKSGGGGGGRVAASSFRTYYRPLSRQSDFIEAMRQSRAFAAAASRDLGLRIYSYS LFHVFFEQYLGVAGDAVRMVGLPLLAVVGVAWGLGGSLAAAALLAVVLASLLLHLAGAMV LAGIQVNAVSLVNLAMALGIAVEFCAHVLHAYMVAAVPLAAAVGGQQPQQPQQQQQQQQR QRGQGQQGSAGGDGSAWSRLIARLRGGYTQLPAAAAAADGAAGGGDAAAGGGVWRLGFLG GPQRAARSRAALVSVGASVLSGVTLTKLVGVAVLAFARTQIFEIYYFRLYAALVVAGAAH GLVLLPVLLALAGPTAVF NT seq 5097 nt NT seq  +upstreamnt  +downstreamnt atgagcatgaggagtttttgggatgtcctagtgctggtggcggtggtgggagccagcgtc cgctcccagcctgaaccggcgccggcgcctgtgtacccaggccccagccccagcccctct ccttccccctccccctccccctccccctcgccttcccccaccccctcctggctgacacgc gaccactcgcccggcatgtgcgccacgtacggcacctgtggccaccgccgcgacggcgac ccgctgccgtgcgccgccaatgtgccggcggcgccgccggaggaagcgctggccaccgca ctgcaggccgtgtgccccagcctgtgggcggctgcgggcggtcccgcggggcgctactgc tgcaccgcggatcaggtccagcgcatcagctccgataccgccaaggccatgcccttcatc gtgggctgccccgcctgccgccgcaacttcctgcagctgtggtgcgtcaccacctgctcc cccgaccaggcgtcattcgcaaacgtgacggcggtgcagaccgcggccgacaccaactcc tccacggcggtgtcggagctcgagtactgggtgtcggagcagtacagcagccagctgtac gactcatgcaaggacgtcaagttcggcgccgccaatgtgccggccatgtccttcatcggc ggcggcgccaccaacggccaggcatggctggacttcctgggcactctgaaggacaagcgc ttcccgcccattggctccccaatccagatcaacttcaggcctgagaacgcgacgccaccc gggctgtccccgctggctgaccgcgtggtggcgtgcggcgacaacgccttccgctgctcc tgctccgactgccccgcggcgcagggctgcgcacagccggcgccggagccgcccgcgccg ccgcccgcctgccacgtgggctccctgcgctgcctcaccttcgcactcatctgggtgtat gccgccgtggccgcctgcgtgctggccggctacgtgctgggactgggggccggcagcggc gcggcggccgcggccgcggcagctgcagcggaggcggaggcgagcacaggggcggaggcg ggggcagggggcggcaaggaaagggcggcctggggcgtggcggcgggctgggagcaggac gggcttgcgggaggaggtggcggcgaggcgggggccagcgggctccgtcagccgctgctg cacggcggcgcgggcgccagcggcggcggcggcactgggtccggcggaggggcaggtggt ggcggcggcggcggcggtcaccggccgccgcgggtggagcggctgctgcagcggggctac taccgcctgggtctgtttgtgggctaccacccagtggctgtggcggctgtgggtgtggcg ctggcggggctgtgctgcctaggcctgatgcggttccgggtggagacggacccgcagagg ctgtgggtggggccggagagccaggcggcgagggagaaggccgcctacgaagcctccttc ggccccttctaccgagtggaacaaatgatcctggccacacagccgccgccgccgccgtcg cggcagccgccgccggcagcctcaggggccccgcctcctcccgcctcctcctcctccgcc gccgccgccgccgccgccatcctgagcggcccgcacttgcagctgctgttcgacatgcag cagcttgtggacgagctggaggcccccatccgccgcccggacggctccgagggtgtggtg cggctgcgtgacgtgtgcttcaagccattcggcgacgagtgcgccactcagtccgtactg cagtactggcggctgaaccgcaccctgtacgagacggagcaggcccggcccgccggctcg cccggccgcatgacgcccgagtactgcttcacacactggtacaccgagtgccgcagtgcc ttccaggcgcccatagacccccacgtggtgttgggcggcttcccggtgggagaccagttc accacctacaccgccggcgccacctcgttcgtgaccacctaccccgtgtcctcggagccg gcgctgcgggcggcggcggcggcctgggaggcggccttcatcgacctggcggcggggcgg ctgggcgacatggcggcggcggccggactcagcctgtccttctccaccgagaggtctgtc caggacgagctgacccgtgagagccgggcggacgcggtgacggtggcggcgtcgtacggc ttcatgctgctctacatcgcagcggccctgggctccctcccgccgctgtggccggtgtgg tgggcggctcggggccggggcctgcgcgcggcggcggcctggctgcggcgcggcgcgctc accagccgcggcggtctgggtctggcgggggtggccatcgtggcactcagcgttgcgggc gccctgggcctggtgtctgctgcggggctgtggtgcacgctcatcatcatggaggtcatt cccttcctggtgctggcggtgggcgtggacaacatgttcgtgctggcacacgccatgggc aagcaggaccacgcgctgccgcccgccgagcgcctggccctgtccctcgccgccgccggc ccctccatcaccctcgccgccgcctgtgagacggccgccttcgctctgggcggcctgctg acgtcaatgccggccgtacggaacttctcactggcggcggcggcggctgtggcgctggac tttgggctgcaggtcaccgtgttcgcggccctgctggttctggacgtgcgccgccttcag agccgccggctggactgcctcccctgcattcagctacagccggagcagctacagcccggc ggcagtagcgccagcagcagcgccagccgccggcggcggcgcggcggcggctcgccgtac cggcctagtacggcaatgatgatggagcggcactacggcggtacgaaggacgtactggat gaggacgagctgtcgtacgagcagcggcaacagcaggagtacggcagtgtgacacgggag gacgaccggccgccgtacattggccccagcagcgacggcgaggtggacgagcactcgtac tggtccctgcagcgcgtgctgcaggcctactttgagtggctgcacgcgccgctgctgtcc cgccccgccgcccaggtcgcggtgctgctggccttcgccgcctccgcctgcgtgtgcctg gcgctgttgccgcagctgcaggtggggctggatcaggcggtggctttgccgcgagactcc tacctgcagccctactaccgtgacgtgttggcccagctgcgtgtgggtccgccgctgctg ctggtggtggaggatctggatctggatccggcggcgaggcaggtggaggcgctgtgcggc gtggcgggctgcgacccggactcactggtcaaccgggtgtccgccgccgctcgcgacccg ggccgcacctacctggccgccgccgccgcctcctggctggacgacttcatgtcatggctg tcgcccgacctgcctgcctgctgcagggcacgaaacgctgctaccggcgccaacgccctg ctagtcggcgacccgtacgctcctacatcctccttccagagtcttgccactactgcggcg cctgccttcggccccgccgcctccccctccatcactggcgccgccgccggctcctactgc ccgccgcccgaccagccgccctgcagcaccaacgcctccacctgcgccggctgtcgcacg tgcgtgcagacggcgttcgaaggcggccgccccagcgtgtcccagttccagtcctacctg ccctggttcctgggcgcccgccccagtgagggctgcgccaagggcggtgtgggcgcctac agctccgcactgcagcgggcagaccccgacgaccccaccagcgtggcggggctactgccg gaggcgggctggcgggaggggggctggggggagaaggcgggctggggggaggaggaggag gagcaggacgagcaggaggaggggcaggaggaggggcaggaggaggaggcaggggcgact gcagctgacctggcggcgcggcttcggcggcggcggcagctgctgaagcagcggcgcggc ggcggcgccgccaccaccaccataagtgccgatggcggcggcaagagcggcggcaagagc ggcggcggcggcggcggcaagagtggaggcggcggcggtggtcgtgtggctgccagcagc ttccgcacctactaccgccccctcagccgccagtccgacttcatcgaggccatgcgccag tcgcgcgccttcgccgccgccgcctcccgcgacctgggcctccgcatctactcctactcc ctcttccacgtcttctttgagcagtacctgggcgtggcgggcgacgccgtgcgcatggtg gggctgccgctgctggcggtggtgggcgtggcctggggcctgggcggcagcctggcggcg gcggcgctgctggcggtggtgctggccagcctgctgctgcacctggcgggcgcgatggtg ctggcggggatacaggtgaacgcggtgtcactggtcaatctggccatggctctgggcata gcggtggagttctgtgcgcacgtgctgcacgcatacatggtggcggcagtgccactggcc gcggcggtgggggggcagcagccgcagcagccgcagcaacagcaacaacagcagcagagg cagcgggggcaggggcagcagggctcagccggcggggacggcagcgcctggagccgcctc atagcccgcctgcgcggcgggtatacgcagctgccggcggcggcggcggcagccgacggc gcagccggcggcggtgacgccgccgctggcggcggggtgtggcggctgggtttcctgggc gggccgcagcgcgcggcgcggtctcgtgcggcgctggtgtcggtcggggcctcggtgttg agcggtgtgacgctcaccaagctggtgggggtggcggtgctggcgttcgcgcgcacccag atcttcgagatctactacttccggctgtacgcggcgctggtggtggcgggcgcggcgcac gggctggtgctgctgccggtgctgctggcgctggcggggcccacagcagtgttctga

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