Crassostrea gigas (Pacific oyster): 105322741
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Entry
105322741 CDS
T03920
Name
(RefSeq) ecdysone-induced protein 78C-like
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105322741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105322741
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105322741
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105322741
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
105322741
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF4597
Motif
Other DBs
NCBI-GeneID:
105322741
NCBI-ProteinID:
XP_011419905
UniProt:
A0A8W8NIM6
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Position
LG1:complement(37765920..37781095)
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AA seq
474 aa
AA seq
DB search
MDAREGEQTSGGVSEESGPLSIDDLPAFYSPAELEQLAGQISQSLEHDHPKGQGGFAIPG
FQEVSSSRHVTADARASVAPSSSLQKSSNKEESGNIQAAADSNSQKQFVPCKVCGDRASG
FHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGKCMVIRLSRNRCQYCRFKKCLAVGMSRDS
VRYGRVPKRSKSQDDSCVSSTDSNMDQSALENKQLAIYDIILNISQAHHTNCLVTEDRIK
NLTRKPSSLMQQISIPSTPVQFSDEELEAQKLSMWHCLASFITPAINSVVEFAKRVTGFP
ELNQDDQLILIKCGFFEVWLMRMARMFNKAEGCLTFEDGSIIQKEELGVVFSPDFVSCMF
DLAQSLNQLNLNDTEIGLFCAIVLATPDRKGLENPKAVETIQDRLIEALKLQILRNHSTE
ENLFGTTIVKLPQLRTLGVQHDEILEWYRAQWNRVRLPPLFSEIYDISKHEEDM
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgagagaaggggagcaaacttctggcggggtgtcggaagagtctggccccctg
tccatcgacgacttgccggcgttttacagccccgctgagttggagcaactggcggggcag
atctctcagtcgctggagcatgaccaccccaagggacaaggaggattcgcgattccaggg
ttccaggaagtttcctcgtctcgacatgtgacagcagatgcaagggcatctgtggccccc
agttcttccctacaaaagtcatcaaataaagaggaatctggcaacatccaagctgctgca
gactctaacagccagaaacagtttgtcccctgcaaggtgtgcggagacagggcctctgga
tttcattatggggtcacttcctgtgagggctgtaagggattttttcgtcgtagtattcag
aagcagatcgaatacagatgtttgcgggacggaaagtgtatggtaatacgactcagtcgc
aacagatgtcagtactgccgatttaaaaaatgtcttgctgtgggaatgtcaagagactct
gtccggtacggtcgtgttcccaagaggtccaagagtcaggacgacagctgcgtgagttcc
acggattccaacatggaccagtcagcgctggagaacaaacagctggctatttatgacatc
attctcaacatttcacaggcgcatcacactaactgtctagtcactgaagacaggatcaaa
aacctgaccagaaaaccatcttctctgatgcaacagatttccattccttcaaccccggtt
caattttcggatgaggagcttgaggctcagaagctctccatgtggcattgtttggccagc
ttcatcacccctgcaatcaacagtgtggtcgagtttgcaaaacgagtcacaggttttcct
gagctgaaccaagacgatcaactgattttgatcaagtgtggtttcttcgaagtttggctg
atgaggatggcgcggatgtttaacaaagcagagggctgtttaactttcgaagatgggagc
attatacaaaaggaggaattaggggttgttttctcacctgattttgtaagctgtatgttt
gaccttgctcagagtttgaaccagcttaatttaaatgatacagaaataggtctcttttgt
gccatagttttagctacaccagatcgcaaggggttggagaatcccaaagcagtagaaacc
atccaggaccgtttgatagaagccttaaagctgcagatccttcgcaatcactccacagag
gagaacttatttggaactacgattgtgaaacttccacagctaaggactctgggagtacaa
catgacgagattctggagtggtaccgagctcagtggaaccgagtgaggttacctcccttg
ttttcagaaatttatgacataagcaaacatgaagaagacatgtaa
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