Magallana gigas (Pacific oyster): 105324446
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Entry
105324446 CDS
T03920
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
105324446
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
105324446
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GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRR_6
AvrLm4-7
DUF1796
Motif
Other DBs
NCBI-GeneID:
105324446
NCBI-ProteinID:
XP_034334158
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Position
LG5:complement(9035849..9038278)
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AA seq
704 aa
AA seq
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MSTLFILIVFGITTSSLGKSFSEKCKWTHRDEEVMVNCSRRGFSYIPKFNNSVSYLDISW
NNIKQLNETSFGFLPMLNYLDLSYCNIRDVDEGVFGGLINLQYLNLSYNRELGFASLPNI
TFGLHQTQISVLNFNGINCETGVGTVIKRNHLENIRKTNLTELYLGSNRLELFESGVIYY
LPTTLQILGVAENKLTTGLYMLELSSMLGLKVINVSFQSYSQLYLMPILSHCQEKVDENL
KRTVHQPGHMIFNINWSFPFPPNLETLYAQNSQIYIIEPHFTFTASNLRHIYLQNNFISA
LREHVHALSNHVETMDMSNNFCSRMVRLLDAKSMKHLNFSHNAISQDLEGDSTGEICKTF
TSLEVLDISFNRILSLPKLLLRNSNELRYIDASNNGLSEWLVDVSKMSNLKLLDLSENKF
ATLSSHARQQFGDAFQLSNLTIDISRNGIACTCENQEFLEWMHENKNYFLHIENYTCSTT
DSMFDFKSLESSVHNLQKQCKSFLGWYIGCSVSSAIFVTFIISIIVIKNKWKIRYLIYKS
KQKFGFVTPLNRCIPDTMHYEYDAFLSYSGQELMFVLKQVIPRLEVNKNLRLLIRDRDYL
PGISKIDSTMKSLQESRRTVCIVSKKYLESKWRDYELNMAKTEGIEDRGSLDYVILILLP
EVYNGKHLPKTLMDLIRKDRYIEYPMESCAYDDFWDRLIRMIEQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccctctttatattgatagtgtttggtataaccacatcaagcttaggtaagtca
ttttcagaaaaatgcaaatggacacacagagatgaggaagtgatggtcaattgctctaga
agaggtttttcatatataccaaaattcaataacagcgtttcttacttggacatttcgtgg
aataatatcaagcaattgaacgaaacgtcttttggatttttacctatgttaaactatttg
gatttatcatactgcaacatacgtgatgttgacgaaggggtctttggagggctgataaat
ttacagtaccttaacctttcgtacaacagagaacttggatttgcatctttgcctaatata
acatttggcctacaccaaacacagatttcggtattgaattttaatggaatcaattgtgaa
actggtgttggtaccgtcattaaaagaaatcatttagaaaacattaggaaaactaatttg
acagaactctatctcggaagtaacagacttgaactgtttgaatcgggcgtgatttattac
ttgccaacaactttacaaatattgggagttgcagaaaataaattaacaacaggtctgtac
atgttagagttaagctcaatgttgggattaaaagtgattaacgtaagttttcaatcatat
tcacaattatacctcatgccgatcctaagccattgtcaagaaaaagtagatgagaatttg
aaaagaactgttcatcaaccagggcacatgattttcaatattaactggagttttcctttt
ccaccgaatctagaaactctttatgcacaaaatagccaaatatatatcattgaacctcat
tttacatttactgcttcgaaccttcgacatatttacctacaaaacaactttatatcggct
ttaagggagcatgtgcatgctctttcaaatcatgttgagacaatggatatgtcaaacaat
ttttgttcccgcatggttcgattacttgatgccaaatcaatgaaacatttgaacttttct
cacaatgctatcagtcaggatctggaaggagactcaactggtgaaatctgtaaaacgttt
accagtcttgaggtgctagacatatcttttaacaggatactgtcactaccaaaacttctc
ctaagaaactcgaacgaattaagatatatagatgcaagcaacaatggattatctgaatgg
ttggtagatgtgagcaaaatgtcgaatctcaagttacttgatttgtctgagaacaaattt
gcaacgctaagttcacacgctcggcaacagtttggagacgcttttcaactatccaattta
accattgacatttcaagaaatgggatagcttgtacttgtgagaatcaagagttcttggaa
tggatgcatgagaacaaaaattattttttacacattgaaaactatacttgctctacaaca
gattccatgttcgatttcaaatctcttgaatcctctgtacacaacttgcaaaagcaatgt
aaatcattcttgggttggtacataggctgttcagtctcctcagcaatatttgtcacattt
attattagtattatagttattaaaaacaaatggaaaatacgatatcttatctacaaatcc
aagcaaaagtttggttttgtaactccgttgaatagatgtataccagataccatgcattat
gaatatgatgccttcctttcatacagtggtcaagaattaatgtttgtcttaaagcaagta
atacctagattagaagtcaacaaaaacctcagactacttatcagagatcgggattacttg
ccaggcatttcaaagatagacagcaccatgaaaagtctacaagaaagtagacgaacagtt
tgcatagtgtccaaaaagtatttggagtctaagtggcgtgactatgaattaaacatggct
aagacagaaggtatcgaagaccgtgggtctcttgattacgtcattctcatattgttaccc
gaggtatacaacggtaaacatcttcctaaaacactcatggatcttataaggaaagaccgg
tatattgagtatccaatggaatcgtgcgcatatgatgatttctgggatcgattaatcaga
atgatcgaacagtga
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