Crassostrea gigas (Pacific oyster): 105327657
Help
Entry
105327657 CDS
T03920
Name
(RefSeq) very long-chain acyl-CoA synthetase-like isoform X1
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105327657
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
crg01004
]
105327657
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crg02000
]
105327657
Enzymes [BR:
crg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
105327657
Lipid biosynthesis proteins [BR:
crg01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
105327657
Transporters [BR:
crg02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
105327657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
105327657
NCBI-ProteinID:
XP_034323105
LinkDB
All DBs
Position
LG3:5216349..5226054
Genome browser
AA seq
627 aa
AA seq
DB search
MPGGGAVLAAVAGGLGTGAFVWRGPYPTLMDDIKTIYTTRKPQAVTARDVASLRFVIDMF
EETSRLHPERVFIVFEDKNYTYAMVDAMANRVANVVAAWNLTVGETVAIMAYNSPEFLWT
FLGVLKLGLAGTFINYHLKEEPLIHSLTASRSRHLIVGRGAELVDTILGVYDKLPEDFTV
FVSGTTRKSLPDRIMSFDFLMTRSLPVPVCKVAREKVTLLSPLCYIYTSGTTGLPKPAII
SQGKGIRQTHGYRAIDFSHQDVTYVVTPLYHSAATCVGVFNTIGEGATIVLRRKFSASHY
WEDVRKYKVTVIQYIGELCRYLLRVPKHPLDGVHSIRAAFGNGLRSDIWDEFKTRFRIPQ
IYEFFGATEGTALLMNCCNKVGAIGRWSPIIRWVNGGKSGFHIVKFDPVTEQPIRDKEGK
CIPIQPGESGLLLAVKPPNTVTFYLGPKAMNEKKLMKNVLQLGDEFFNFGDLVYLDHDYY
VYFRDRIGDTFRWKGENVSTTEVANVMTQLNFIHDVNVYGVSISGSDGRAGMAAVQLEEG
YELTSSILSELYSHVVGHLPHYARPVFIRVVQEFTTTQTMKHQKLRLVEEGFDVEAVRDP
LFVINNQSKTYEALTASNIGTILTARL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcgggggagctgtgttagcggcagtggccggcggtctaggaacgggggccttt
gtttggaggggaccctaccccaccctaatggacgacatcaagacgatctacaccaccaga
aaaccgcaggccgtcaccgccagggatgtggcgtctttgcgctttgtaatcgacatgttc
gaggagacttctcggctccaccctgagcgggtcttcatcgtgttcgaggacaagaactat
acatacgccatggtggacgccatggccaacagagtggcgaatgtggtggcagcctggaac
cttacagtcggcgaaactgtcgccatcatggcgtataactctcccgaatttctatggacg
tttttgggtgtgctgaagctggggttagcgggcaccttcatcaactatcacctgaaggag
gagccattgatccactcgctcactgccagccgctccagacacctcatcgtgggtagaggc
gccgaacttgtggacaccattctgggtgtttatgacaaactcccagaagacttcacagtg
tttgtttctggaacgacgagaaaatctcttccggatcgaataatgtcttttgactttctg
atgacacggtcacttcctgtacccgtatgtaaagtagcacgtgagaaggtgaccttgctg
agtccgctttgttacatctatacatccggaacgacaggtttacccaaaccagcaataata
agccaaggcaaagggatcagacaaacacacggctaccgcgcaatcgacttcagtcaccag
gatgtgacgtatgtcgtgacgccattgtatcacagcgccgccacatgtgtcggtgttttc
aacactataggagagggtgctaccatcgtgttgcgccggaagttttcagcgagtcactac
tgggaggacgtccggaagtacaaagtgaccgtcattcagtacataggggaactctgtcgc
tacttactgcgtgtaccgaagcatccgctagatggcgtccattctataagagcggccttt
ggtaacggacttcggagtgatatatgggacgagttcaagacgagatttagaatcccccag
atctacgagtttttcggagccacggaaggaacagcgctcttaatgaactgctgcaacaaa
gtcggcgccattggccgatggtcccccatcatcaggtgggtaaatgggggaaagagtgga
ttccatattgtgaagtttgatccggtgacggaacaaccaatccgggacaaagaaggaaaa
tgcattccgatacagccaggtgaaagcggtctgcttttggccgtgaaaccaccaaacacc
gtgacattctacttgggaccaaaggcgatgaacgagaagaagctaatgaaaaatgtcctt
caactgggcgacgaatttttcaacttcggcgacttggtgtatcttgatcacgactattac
gtttatttccgggacagaattggggacaccttcagatggaaaggcgaaaatgtatcaaca
acagaggtagccaatgtgatgacgcaacttaattttattcatgacgtcaatgtttatggg
gtatctatatctgggagtgatggtagggcagggatggccgccgtacagttggaggagggc
tatgaattgacaagcagtattctatcagagctgtacagtcacgtggtcgggcacctgccg
cactacgcccggcctgtgtttatccgagtggtccaggagttcaccaccacccagaccatg
aaacaccagaagttgaggctggtggaggaagggtttgatgtggaggctgtcagggacccg
ctctttgttatcaacaaccaatcaaagacatatgaggctctcacggcttcaaatatcggc
accatacttactgcaagactctag
DBGET
integrated database retrieval system
