Crassostrea gigas (Pacific oyster): 105331182
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Entry
105331182 CDS
T03920
Name
(RefSeq) nuclear receptor ROR-beta isoform X3
KO
K08533
RAR-related orphan receptor beta
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105331182
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105331182
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105331182
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
105331182
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105331182
NCBI-ProteinID:
XP_011431570
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Position
LG1:complement(33329660..33347035)
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AA seq
529 aa
AA seq
DB search
MSKRDMSVGTDFDLDTGLQEQSYSQPKKKKPEYPYVPKGVPLQLPPCRICGGKASGIHYG
VNSCEACKGFFRRYLLRKEPYKCNHGGNCAITNRHRGNCSACRMMKCLDLGMSKEGIRQG
RYTLTERTRAIMEVKRLQNPESHFEQQTFDIVSAAVSRKNAEKTTAVLLEESMSCMQIPI
SPDCNRQQALSDISDERSLADRLLDFSSFPLHSVSDELTDLLNPDCFLSEDAEMSSAVNM
LLLDTNPPPKTSPEIEAQVDLYDDVIDNLAEALNDMLPHSSQFTDDEIYAILKEGHDKYY
MKSEVFGPLNALSPEEYNAIYEKTQIDVDGRKQHLQFNKGTLDNMIKKYVNFSHAIPCFS
DLPSQDQAKLLKASRFEFFMLLEYRSLNPDLEMLQTYSGEVFHLNEACIYVPREMMKSWL
EFSRTIRKLELTNKELAVTLAVALTFRDRCRLEQPSFLEQIQDNLVRMLYYLLEDHHGEE
FMVAFSRIISMLTGLRSLTENYFRQFKTICKDDLIKQEMPELLGFLFDE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagagacatgagcgtcgggacggacttcgacttggacacaggtctccaagaa
cagtcctacagccaaccaaagaagaaaaagcccgagtacccgtatgtacccaagggtgtc
cctcttcagcttcctccgtgccggatctgtggggggaaggcgtcagggatccactatggt
gttaacagctgcgaagcatgcaagggtttctttaggcgatatctgctacgaaaggaaccc
tacaagtgtaatcacggcggaaattgcgcaataacaaatcgtcataggggcaactgttcc
gcttgtcgaatgatgaagtgtcttgatctaggaatgtcaaaagaaggtattcgacagggt
agatacacgcttacagagagaacaagagccatcatggaagtcaagcgtttgcaaaaccca
gaatcgcatttcgaacaacagaccttcgatatagtcagtgctgccgtttctcggaaaaac
gccgagaagaccacagcggttttacttgaagagtcaatgtcctgtatgcagattccgatt
tctccagactgcaacagacaacaagcgctgtccgatatatcagacgagcgatctttggca
gaccgcttgttagatttttctagtttccccttgcacagtgtatcggacgagctcactgat
ctccttaatccggactgttttctaagcgaggacgctgaaatgtccagcgccgtaaacatg
cttttattggacactaaccctcctcctaaaacgtcaccagaaatagaggctcaagtagat
ttatatgatgacgtcatcgacaacttagcagaggcattaaatgacatgctgccgcattct
agtcagtttacagatgatgaaatatatgccatactaaaagaaggacacgacaaatactat
atgaagtccgaagtgtttggtccattgaacgctttatcccctgaggagtacaacgcaatt
tatgagaagacacagatagatgtggatggaagaaagcaacatttacaattcaacaaagga
accttagataatatgatcaagaaatacgtaaacttttcccatgcaattccttgtttctcg
gatcttccttcccaagatcaagcaaagctactgaaagcctctagatttgagttctttatg
cttttggagtatcggtcccttaaccctgaccttgaaatgctacaaacctactctggggag
gtattccacctgaacgaggcttgtatatacgtacctcgggaaatgatgaagtcatggctc
gaattttctcgaaccataaggaagctggaactcactaataaagaactcgccgtgacgcta
gctgtggcattaacttttagggaccgctgtaggttagagcagccatcattcctcgagcaa
attcaggataacttggtgcgcatgctctactacctactggaagatcaccacggagaagaa
ttcatggttgccttttcacgaattattagcatgttgacaggtctgagaagcctgacagaa
aattacttcagacagttcaagacgatttgtaaagacgatctgatcaagcaggaaatgcct
gaacttcttgggtttctgtttgatgaatga
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