Crassostrea gigas (Pacific oyster): 105331185
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Entry
105331185 CDS
T03920
Name
(RefSeq) bile acid receptor
KO
K08532
RAR-related orphan receptor alpha
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105331185
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105331185
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105331185
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
105331185
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Cwp6_N
Enamelin
Motif
Other DBs
NCBI-GeneID:
105331185
NCBI-ProteinID:
XP_011431575
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Position
LG1:complement(33389228..33398564)
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AA seq
537 aa
AA seq
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MLEPNKNPPRTNGLKLSETKTKKREKYIPNSEPLALPFCRICGKRASGIHFGVYSCEACK
AFFRRYLQRKTPFKCNKGDKCEIDEQKKGLNCSACRLKKCLEKGMSKEGVRIGRYSTAER
TNVIMEVKRLHASIESKSSNDQCPKTLNHEVKDSIILQATMDTPETSGDSMEFKDSILCV
INTHTMARSSSDDSNRSLSDYTENSSTTSDHPILIDTSLSPNSTGSVDSVGSLVLGSTGS
EIEIFSPSALDILCRQQPLPRYDIVPECTDTDQIIKQLMTGYQCIQPFSKSLTDEELNEI
FTHGLEQYEEKVRLFGKMEYLSIQEYKEIYDKTKIDVDGRKELYDLGREELNKMFDELVQ
FTHSIVNFSSLPSKDQTALLKAADFDFNMLVDYRCVDADRGMVLSYTGKPMALSEACPHV
EKETLKEWAEFSRSLQKLKLTPREHALMLAISLTFPDRSPWPLEAHDEVEKIQNKLIKAL
EKLVAETNQRSGGGRFAKLMDVFLRMRGMYKAYEDAVKVMSKDDFLIECIPEILFYL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaccaaacaagaaccctcctcggactaatggcctcaaattgtctgaaacgaag
accaagaaaagagaaaaatacatccctaattctgagccacttgcacttcccttctgtcga
atctgtgggaaaagggcgtctggaatacactttggggtgtacagttgtgaggcttgtaag
gctttcttcaggagatacttacaaagaaagacacctttcaaatgcaacaagggagacaaa
tgcgagattgatgaacaaaagaagggtttaaattgttctgcatgtcgcctgaaaaagtgc
cttgaaaaagggatgtcaaaagagggtgttagaataggtcgctattctacagcggaaagg
actaatgtcatcatggaggtcaaacgccttcacgcctccatagaatcgaaatcttcaaat
gatcaatgtcctaaaacattaaatcatgaggtcaaagactcgataatacttcaggctacc
atggacacaccagagacttcaggagattctatggagtttaaagattctattctatgtgtt
attaacactcacactatggcgagatcatcttcagatgacagcaacagatcattaagtgac
tatacagagaattcttctaccacttcggaccaccccatcttgattgataccagtctttct
ccgaattccacaggatcggttgatagcgtcgggtcgttagttctgggatctaccggaagt
gagatagagatattctcccccagtgcattagatatcctttgcaggcagcaacccttgccc
agatatgacatagtacctgagtgtactgatacagaccaaatcataaaacaacttatgact
gggtaccaatgtatacagccgttttcaaaatccttaactgacgaggagctgaatgagatt
tttacacacggacttgaacagtatgaagaaaaagttcgtctgtttggcaagatggaatat
ctttctatacaagaatacaaggagatatacgataaaaccaaaatagatgtagatggcaga
aaagagctgtacgatctgggacgagaggaactgaacaaaatgtttgatgagttggtccaa
ttcacccatagcattgtcaacttcagttcactaccttcaaaggaccaaacagctctgtta
aaagctgccgactttgatttcaacatgttggtggactatcgttgcgtagatgcagaccga
ggaatggtgcttagttacactggcaaaccaatggcattaagcgaggcctgtccccatgta
gaaaaagaaaccctcaaagagtgggccgaattcagtagatccctccagaagctaaagctg
actcctcgcgagcatgcgctaatgcttgctatctctctgacatttccagacagaagtcca
tggccacttgaagctcatgacgaagtggagaaaattcagaataagttgatcaaagccttg
gagaagctggttgctgagacaaaccaaaggagtgggggtggtcggtttgctaaattaatg
gacgtgttccttcgcatgcgtggtatgtacaaggcgtacgaagatgcagtcaaagtaatg
tccaaagatgattttttgattgagtgcatcccggagattttattttatttataa
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