Crassostrea gigas (Pacific oyster): 105331188
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Entry
105331188 CDS
T03920
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08533
RAR-related orphan receptor beta
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105331188
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105331188
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105331188
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
105331188
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105331188
NCBI-ProteinID:
XP_034307585
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All DBs
Position
LG1:complement(33411327..33418205)
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AA seq
631 aa
AA seq
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MYKPLELPPCRICDGEASGIHYGVNTCEACKAFFRRAVMEKDKYQCAKDKNCKIIDRKRG
NCSYCRLQKCLNLGMSRDAMRHGRYTVAIRTKTILEVKQLKEKAENVNKTPSLETSPTPI
AHITDHSPSIPKLDNLLPVNTTLPKPQGLDAPVISPAVPSIHSSNYSIPSVSSQTTEGSV
DFIASPGNFMTLSPAPYQMDAFSDSDITSLFEDLSSPYLHSETQQLEFKMEDLADSFLDQ
PETSVDFLEDLTLSLQEKSPVEDVTKDDPDQSPTRRSARIAEKRRSLLQEIRPDDDPWLS
TIDPGFFSTTENALTVPMTKKQRSSQSEYEMTVDEMEQMIWTLVWSQDQIYPEYINSFDK
DYIKKLQTEYSEKYDMKNEFFGLKKLLSTEEFNSFYLATGIDVDGRMEMIKKAIEQIQHG
IMKYISFARIIPGFEDLPTDDKMALIKAARFEYWLMGEHVHINTEMKVIYYPDSKAQLTR
DDIIMIFGEPEAVDRCIEFAASLQRLKLTYEEVAVLKAIIITFRDRAPLQNPEKVETIQW
KLVQCLKYLIAKFHKDEPHRFSAYMDKLIFMRELTEINRKVNGRMENLHMSIMKRYPLVY
ECISHDVQENQNDAENHKAQMDFFHEKCPVV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaacccctggagttacctccctgtaggatttgtgatggagaagcctctgggatc
cattacggagtcaacacttgtgaagcatgcaaggctttcttccgtcgagcagtcatggaa
aaggataaatatcagtgtgcaaaagacaagaattgtaaaatcatcgacagaaaaagagga
aactgctcatactgcaggcttcagaaatgtcttaatctgggaatgtcaagagatgctatg
cgacatgggcgctatactgtagccattcgaaccaaaactattctggaagttaaacagctg
aaagaaaaagcagaaaatgtgaacaaaacaccgagcctggagacctctccgacacccata
gcacacattacagaccattcaccctccatccccaaactagacaatcttcttcctgtcaat
accaccctccctaaaccccaggggttggatgctcctgtcatatcaccagcagtacccagc
atccacagcagtaattattccattcccagtgtctcatcacaaaccacagagggcagtgtg
gatttcattgcatctcctggaaacttcatgacattgtccccagctccatatcagatggat
gcattttccgactcggacatcacctcattatttgaagatttatcatccccatatctgcat
tctgagacacagcagcttgagtttaagatggaagatttggcggattctttcttggatcag
ccagagacttcagttgacttcttggaagatcttactctctcccttcaagaaaaatcccct
gtggaagatgtcacaaaagatgatcctgatcaatctcccacacgaaggagtgctagaata
gctgaaaagcgacgttccttgctacaggaaatccgcccagacgacgatccatggctctcc
accattgatccaggtttcttctcaacaacagagaatgctttgacagtgcccatgactaaa
aagcagcgatcaagccagagtgaatatgagatgactgtagatgagatggaacaaatgatt
tggacacttgtatggagccaggatcaaatctatcccgagtacatcaattcctttgacaaa
gattacattaagaagcttcaaaccgaatattctgagaaatacgacatgaagaacgaattc
tttggactgaaaaaactgctatctacagaggaatttaacagtttttacctggccacaggt
atcgatgttgacggcagaatggaaatgattaaaaaagccattgaacaaatacagcatggt
attatgaagtacatttcatttgcccgaattattccaggatttgaggaccttccaacagat
gacaaaatggctctcattaaagcggctcgcttcgagtactggctaatgggagagcacgtc
cacattaacacggagatgaaggtcatatactacccagacagcaaggctcagctgacccgg
gatgatatcatcatgatctttggagagcctgaggctgtggaccgttgtatcgagtttgca
gcctccctacagagactgaagctgacatacgaggaggtggctgtccttaaagccatcatc
atcacctttagagatcgagcaccattgcagaatcctgaaaaagtggagacaattcagtgg
aagcttgtgcagtgcctgaagtatttgattgccaagtttcacaaagatgagccacatcgt
ttctcagcatacatggacaaacttattttcatgcgtgaacttactgagataaacaggaaa
gtcaacggaagaatggaaaacctgcacatgtccatcatgaagcggtaccccctggtgtac
gagtgtatttctcacgacgtacaggaaaaccagaatgatgcagaaaaccataaagcacag
atggacttcttccatgaaaaatgtccagtggtttag
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