Crassostrea gigas (Pacific oyster): 105331560
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Entry
105331560 CDS
T03920
Name
(RefSeq) protocadherin Fat 4
Organism
crg
Crassostrea gigas (Pacific oyster)
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Gene cluster
GFIT
Motif
Pfam:
VWA
Cadherin
VWA_2
VWA_3
VWA_CoxE
DUF642
Motif
Other DBs
NCBI-GeneID:
105331560
NCBI-ProteinID:
XP_011432116
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Position
LG10:41069902..41076714
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AA seq
1094 aa
AA seq
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MKKDWIFLLLLTFSIAKTVEGGCGPSKSDIIFVTDESGSVGAYNFQLTLEALRDTVARLD
VDSGNVRVGVMCFQSSQRTIFNLDAYSTVSSMQNAIMNIDYRSGGTKIGSAMKYTRENMF
RANQGDRPYVTNIMVVMTDGVSNDNELYEAEMTKAADIVIFSVGIGNNLDLDMLNTIAND
PSYFLQTEYSQLGIALSAFIESKVPCAWYCDNGEGFERGGDVSQTSSLGSNSGVTYILQD
TNSGVSCCGSVESWTFYPKRSGSIYLQIWRPVTGSSYKLIGYNYVYVHSSNINRIVKYVV
PDNERITVNDGDKMGWYNPGQEMIPYTSNSGFTQNRFSWGATTLGTVKSVSSPTNINAQF
AIKLKLVNDSSNLWFVNSGRTIHLLDNVGFGTSVYNIVVGQRTQDILTKTMNDPSGKFTW
NSDTGAVSTSGTLVNGQTYTMTFTAKKTCLNTTISGGTLSVKVSNTPPRITSLPAMMTLS
ENQQSSITLHVLTVADDTDSSVTCSIDSVDPSSATSKFSLTSATAMSYNLILNSNPEFNY
TNDKKYTIKLSCTDGKNSPVYGYFKLFLQRNVRPYLSNIPANGFSYSASSRSNMTDFITL
TTTDPDNTDFTYAFEYCGPYSCPLWMLDETTGLVEYNQSMGGWWKGGFNVGFSVTDGQTK
SKSKYIPVHLTGYRYSPSFISLPTVSKLVINEKIPPNQFLFTVTFYDLDVDTLTPTFTIS
NGDWTYFTIKDNTDVYTSNTQIDYESLSRTSYLITASVSDGTSTVSKSFTIKIDNVNEAP
SFQTTVYTVTADEGPAGTQLTPYPPSYVFTDVDVGDTHFFTLDCGQSTRYFSFDTSNGAI
SFGRAVDVDSGAPRLTSCKVKVYDQGHLTDSADLHITVYDINDNGPRFDQTYYTYSVTPG
VTPGTVIGLITLTDADLTDPHNAIGRVWFENQPTDSKGQEYFAYNNVTREFSVAQNLSQY
FFGSYLEFQLKARDLGSPQLEATANIVILFEAMTTTVAMPTTETPGSFGNDAKNALWMSA
VGMGGAGLLLTGGYVALKACCSSASGLSSLGGSGGPLNVSSSDPAANDKPEQKKKPKKAK
SKGRDKVFKDGNMV
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggactggatttttcttcttttgcttactttttcaattgccaaaacagtagaa
ggaggatgtggaccgtcgaagtctgacatcatctttgtgacggacgagtcagggtctgtg
ggagcctacaacttccagctgactctggaggccctgagggacacagtggccaggctggat
gtcgactccggtaacgtgagggtgggagtcatgtgtttccagagctcccagagaaccata
ttcaatctggacgcgtacagcacggtctccagcatgcaaaacgccatcatgaacatcgat
taccgaagcggggggaccaaaatcggcagcgcgatgaagtacacccgagaaaacatgttc
cgtgcaaatcaaggtgaccgaccctatgtgacgaacattatggtagtgatgacggacggc
gtttccaatgacaacgagttatacgaggccgagatgaccaaggccgcggacatcgttatc
ttctctgttgggatcgggaacaacctcgacctagatatgctcaacactattgccaatgac
ccttcatacttccttcagactgaatattcgcagttagggattgctctgtccgcttttatc
gagtccaaagtgccctgcgcctggtattgtgacaatggcgaagggtttgagcgaggcggc
gatgtctcgcagacttcatctcttggtagcaattcaggagtcacatacattcttcaagat
actaattccggtgtttcctgctgtggaagcgtagaatcttggacgttctatccaaagagg
tcgggctcgatttaccttcagatttggcgccctgtaaccggatcctcttacaaactcatc
ggctataactatgtctacgtgcattcttccaacataaacaggatcgtgaagtacgtagtc
ccggacaacgaacggataacggtgaacgacggggacaaaatgggatggtataacccggga
caggaaatgataccctacacgtcaaattcgggcttcacacaaaacaggttttcctgggga
gcgacaacattggggaccgtaaagagcgtctcctccccaaccaacatcaacgctcagttt
gccatcaagcttaagctagtgaatgacagtagtaacttatggtttgttaattcgggtaga
actattcatctcctcgacaacgtgggatttggaacgtcagtatacaacatcgtggtagga
cagcgcacacaggacatcctgacaaagaccatgaatgatccgagcggaaagtttacctgg
aacagcgacacgggtgccgtgagtacgtctggaacactggtcaatgggcagacatacacc
atgacatttacggcgaagaaaacttgtttgaacacgaccatttccggaggaacgctgtct
gtgaaagtttcgaacactccaccacgaataacgtcacttcctgctatgatgacgctgtca
gaaaaccaacaaagcagcatcactcttcacgtgctgaccgtagcagacgacactgatagc
tcagtcacatgttctattgactccgtggacccatcgtctgcaacttccaaattttcgctc
acctcagctactgcgatgagttacaatttgattctcaatagtaatccagagtttaattac
acaaatgacaaaaaatacacgataaaactatcctgcacagatggtaaaaacagcccagtt
tatggctacttcaaactgttcttgcagcgtaacgtacgcccatacctaagcaatattcca
gctaacggtttttcatacagcgccagttctagatccaacatgacggacttcatcacactc
accaccactgatccggacaacacagacttcacttacgcctttgagtactgtggaccttac
tcgtgccctctttggatgctggatgaaacaacgggtttggttgagtacaaccaaagcatg
ggcggctggtggaagggaggattcaatgttggcttctctgtaacagacggccagaccaag
tccaaatctaagtacatccctgtccatctaacaggttaccggtatagtccgtccttcatc
agtctccctactgttagtaagctggtgattaatgagaagatccccccgaaccagttcctc
ttcaccgtgaccttctatgaccttgacgttgatacattgacaccaacgttcacaatcagc
aatggagactggacgtactttactataaaagataacactgacgtctatacaagcaacacc
cagattgactacgaaagcctgtcaagaacgagttaccttatcacggcctctgtcagcgac
ggaacgtccacggtcagtaaatcgttcacaataaaaatcgacaacgtgaacgaggcgccg
tcattccaaaccaccgtgtataccgtcactgccgatgagggaccggcgggaactcagctg
acgccctaccctccgtcatatgttttcacggacgttgatgtcggtgacactcatttcttc
actttggattgtggacagagtacacgatacttcagcttcgacacttcaaacggcgccata
tccttcggacgggcggtagacgttgacagcggggctccaaggctgacgtcatgcaaggtc
aaagtatacgaccaaggtcatctcactgactcggctgatttgcatatcactgtgtatgat
ataaatgacaacggccctcgttttgatcagacgtattacacgtattctgttacccccggt
gtgaccccggggaccgtgataggtctcattaccctaacagacgctgacctgactgacccg
cacaacgccatcggacgtgtttggttcgaaaatcagccgacagactcaaaaggacaagaa
tactttgcgtacaacaatgtgaccagagaatttagcgtggcacagaatttgagccaatat
ttctttggatcttacctcgagttccagctcaaagcgcgagatcttggttcacctcaatta
gaggcaactgctaacatagtgatcttgtttgaagcgatgacaactacggttgccatgcca
acaacagaaacccctggaagttttggaaacgacgccaagaacgcgctatggatgagtgcc
gtgggaatgggcggggctggattattgctgactggtggttatgtggctctcaaagcgtgc
tgcagcagtgcgtctggtctttcgtctctcggaggtagtggtggaccactcaatgtctcc
tcgtctgatccagcagccaatgacaagccagaacagaaaaagaagccaaagaaagccaaa
agcaagggtcgtgataaagttttcaaagacggcaacatggtataa
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