Crassostrea gigas (Pacific oyster): 105332368
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Entry
105332368 CDS
T03920
Name
(RefSeq) nuclear receptor subfamily 2 group E member 1
KO
K08544
testicular receptor 4
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105332368
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105332368
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
105332368
Nuclear receptors [BR:
crg03310
]
2. Hepatocyte nuclear factor 4 like
2C. Testicular receptor
105332368
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105332368
NCBI-ProteinID:
XP_011433241
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All DBs
Position
LG7:complement(58769351..58777627)
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AA seq
503 aa
AA seq
DB search
MNSVLSPEIIRDSGQQDRKPEILCLVCGDKASGKHYGVQSCDGCRGFFKRSIRRSLEYVC
KENGNCVVDVARRNQCQACRFRKCLEMKMNRDAVQHERAPRCYQFKKDNPDHFGDSMKNQ
SPFPHHIGDIFERQRCYTYNQVPSYGLNIGYHPEYAVPRYSPYMPSLPVPIPDQRRNFFL
SANITNGNIDIGLRPHQESSDGASSSVSSTNSSMNGGDKSISRSPSPSVDSTESNSSPRR
DHSPGLHDVKQEQESKPSADISSPVSSSTTSADEKGQLTPHKLALPFTNPPRSPPDNPTE
TPLYNGVPSNDCTFETAAKLLFMSVKWAKNIPSFLQLPFRDQAILLEESWCELFVLSAAQ
WSLNIDIGFLLSANGYTLDGPKMEKTTLMSLQLRQLQDIIYRLNGIRLDSTEYACLKALL
LFKPDVKGLRDSLQVEALQDQAQIMLYDYVSNQKLLKTRFGRLLLQLPALRNVSSRAVED
IFFRRTIGNIPIERILCDMFKSS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggtcctttcccctgaaattattagagattctggacaacaagatagaaaaccg
gaaatcctgtgtcttgtctgcggagacaaggcttctgggaaacattatggcgtgcagagc
tgcgacggctgtcggggattcttcaagcggagcatccgtcgtagtctggagtacgtctgc
aaggaaaacggaaactgtgtggtagatgttgcaagaagaaaccaatgccaggcctgtagg
ttccggaaatgtctggaaatgaagatgaacagagatgctgttcaacatgagcgggccccc
cgatgttaccaattcaagaaagacaacccagatcattttggtgattctatgaaaaatcaa
agcccttttccacatcatattggcgatatatttgagcgacaaagatgctacacatacaac
caggttccaagctatggactaaacattgggtatcacccagagtacgccgtaccaaggtac
tctccctatatgccttcacttccggttcctattccggaccagagacgtaactttttcctg
tccgctaacataaccaatggaaatatcgacataggtctccgcccgcaccaggaatcaagt
gatggtgcgagtagcagcgtatcgtctacaaactcttctatgaatggaggagataaaagt
atcagcaggtctccctccccttccgtggactctaccgagagcaacagctctcctaggcga
gaccatagtccaggtctgcatgatgtgaagcaagaacaagagagcaaacccagcgccgac
atatcctctccggttagttccagtaccacgagcgcagatgaaaaaggccagctgaccccg
cataaactagccctgccatttaccaacccacctcgatctccgcccgacaaccccacagag
acccctctctacaatggcgtcccctccaacgactgtacgtttgagacggccgccaaactt
ctgttcatgtcggtcaagtgggcaaaaaatataccttccttcctacagctgccattccgt
gaccaagctattctgttggaagaatcctggtgtgaactctttgtactgagtgcggcacaa
tggtcgttgaatattgacataggtttcttactaagtgctaatggatacacgctggacgga
cctaaaatggagaagaccacattgatgtcactacagctgaggcagcttcaggatatcatc
taccgcctgaacggcatccgtctggactctacggagtacgcatgccttaaggctctactc
ctctttaaaccagatgtgaagggactgcgtgactcgttacaagtggaggcattgcaggac
caggcacagataatgctgtatgattatgtcagcaaccagaaacttctgaaaacgcgattt
ggaagactactactgcaacttccggcactgcgcaacgtgagttctcgcgcagttgaggac
attttcttccggagaacaattggcaacattccaatcgaaagaatcttgtgtgacatgttt
aagtcaagttaa
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