Crassostrea gigas (Pacific oyster): 105333252 Help Entry 105333252         CDS       T03920                                  Name (RefSeq) DNA ligase 3 isoform X1   KO K10776   DNA ligase 3 [EC:6.5.1.1] Organism crg  Crassostrea gigas (Pacific oyster) Pathway crg03410   Base excision repair Brite KEGG Orthology (KO) [BR:crg00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     105333252  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:crg03400]     105333252 Enzymes [BR:crg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      105333252 DNA repair and recombination proteins [BR:crg03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      105333252 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N zf-PARP LIG3_BRCT DNA_ligase_A_C zf-CCHH RNA_ligase mRNA_cap_enzyme BRCT_2 FMP23 Motif Other DBs NCBI-GeneID:  105333252 NCBI-ProteinID:  XP_011434445 LinkDB All DBs Position LG6:43825431..43836475 Genome browser AA seq 993 aa AA seqDB search MPRIFQQACIILFRCLQSNSKRTLSRSLQITKSEFVNAHTLKFFCVRSFHIPTERAMAEN RYTTGYAKLGTSSCKKCKQKIDKGGLRIGKVVSNPFSDEGGDMKQWYHPQCMFETLKRAR ATTKKIEEPDDLEGFTEIEQSDKDLINKLIKEFATHSSTKSPGSAKKKATSKVQATLPFS PTKQKADPGDEVYSAGPSTSALESDAPGHRDDSFREFRRLCAEIAEENSYLAKTKLVHDF INKGSSGDGFKGDIYLWMKCLLPGVVKQVYNLNSKQLVKLFSQIFGASQDDMVADLDQGD VAETVRLYFEESKRFPPQKKSLLSLQQVDDYLDELSKVTKEDDQQRILTKVAKRCTGNDL KMFVRLIKHDLRINSGAKHILDALDDNAYAAFQASRNLRDVVDRVMENKAGGVPGMKKKL SVKASLMTPVLPMLAEACRSVDQAMKKCPNGFYAEIKYDGERVQLHKKGHNFQYFSRSLK PVLPHKVQHFKEFIPKAFPTGDDLILDAEVLLVDNKTSKPLPFGTLGVHKKAAFQDANVC LFVFDCLHLNGENIMHKPIKERKKILETEMKEIPNRVMLSEAQLINDPDDLQTLMTKVFK EGLEGLVLKDINSKYEPGKRHWLKIKKDYLEQGTMADSADLVVLGAYFGTGNKGGIMSIF LLGVYDPSSSKWCTVTKCHSGLDDKTLEELQTSLDMVKISKNADKVPSWLNVKKQVVPDF VTRDPKKSPVWEISGAEFSKADIHTADGISIRFPRITKFRDDKNWENATDLPRLRTLFKK SKETTDLIPSSSEGTPKKKPLKDDDEDNDNNNEGDDSGTDINSDDDTGVSPMKTTPAKNS ATPSKTTPLKATPTKNGVKRKHSDTGNGEITPSKKSKPMCKYGADCYQTNPTHLEQFDHP PKTLPNVFRGCKIFLPTDTKLYRTLRRYIIGWDGELVPEYDKASATHVILDKGYKGDIVK CAGVCLTLDWIKMCIKKKMLVRTDPYLVGDDYE NT seq 2982 nt NT seq  +upstreamnt  +downstreamnt atgccaaggatattccagcaagcttgcatcatattgttcaggtgtcttcagtcgaattca aagagaactttgtcaaggtctttacaaattacaaaatctgagtttgtaaatgcccataca ctcaaattcttttgtgtcagaagttttcacattcccacagagagagccatggctgaaaac agatataccacaggctatgctaaacttggaacttccagttgtaagaaatgtaaacaaaag attgataaagggggactaagaattggaaaagtggtgtcaaacccattctctgatgaaggc ggtgacatgaaacagtggtaccacccacagtgcatgtttgaaaccctaaagagagccaga gccaccacaaagaaaattgaggagccagacgatcttgaaggattcacagagatcgagcag tctgataaagatttgatcaataagttaatcaaagaatttgccactcactccagtacaaag tctccaggctctgcgaagaaaaaggcaacatccaaagtacaggccactctgcccttttcc cccacaaagcaaaaggctgatcctggtgatgaagtttattcagctggtccttcaacgagt gccttggaaagtgatgctccgggccacagagatgactcattccgagagttccgacgcctt tgtgcggaaatcgcagaggagaattcctacttggctaaaactaaacttgtccatgatttc attaacaaaggctcctctggagatgggtttaaaggtgacatttacctgtggatgaagtgt ctgttacctggagtagtgaagcaggtgtacaaccttaacagtaaacaactggttaaactg ttcagccagatatttggtgcaagtcaggatgacatggttgcagatttggatcagggtgat gtcgcagagaccgtcagattgtactttgaagagagcaagcgatttcccccacaaaagaag agtttactctctttgcagcaggttgatgactaccttgatgaattatccaaagtaaccaag gaagatgaccaacaaagaattctcactaaggttgctaagaggtgcacagggaatgatttg aagatgtttgtgagattgataaagcatgaccttagaataaactctggagcaaagcatata ttggacgctctggatgacaatgcgtacgctgccttccaagcgtccaggaatctgagggac gtagtggaccgggtgatggagaacaaggcaggaggagtgccggggatgaagaagaagctc agtgtcaaagcctccctcatgacccctgtccttcccatgctggcagaggcttgtaggtca gttgaccaggcaatgaagaagtgtcctaatggtttctatgcagagataaagtatgatgga gagagagtacaacttcataaaaagggacacaactttcagtatttcagcagaagtctaaag ccagttttaccccacaaagtccagcattttaaggagtttatcccgaaggcctttcccact ggtgatgatctcattctggatgcagaggttttattagtggacaataagaccagcaaacca ctcccgtttggaacactaggagttcacaagaaagctgcatttcaagatgctaatgtctgc ctgtttgtgtttgattgtcttcatttaaatggagaaaatattatgcacaaacctataaaa gagagaaagaagattctggaaacagagatgaaagaaattcccaacagagtcatgctttct gaggcccaactcattaatgatcctgatgatcttcaaacattgatgacaaaagtattcaag gaaggcctcgaggggcttgtcttaaaggacattaatagtaagtatgagccaggaaaacgt cactggctgaagatcaagaaggactacctggagcaggggacgatggcggactcagcagat cttgtggtgctaggggcgtacttcggaacaggaaataaaggtggtatcatgtccatcttt ctgctgggtgtctatgaccccagcagcagtaagtggtgtacagtgaccaagtgtcacagt ggtctagatgacaagacattggaggagcttcagacatcgctggacatggtcaaaattagc aagaatgccgacaaggtaccaagttggctgaatgtaaaaaagcaagttgtgccagacttt gtgacgagagaccccaagaagtcaccagtctgggagatttctggcgcagagtttagcaag gctgatatacacactgcagatggaatttccataaggtttccccgaatcacaaagtttagg gatgacaagaattgggagaatgcaacggatttgcccagactcagaaccctcttcaagaaa tcaaaggaaaccacagacctcatcccaagctccagtgaagggaccccaaaaaagaaaccc ttgaaggatgatgatgaagacaatgataacaacaatgagggggatgacagtgggacggac ataaacagtgatgatgacacaggggtatctcccatgaaaaccacccctgccaaaaacagt gccacaccctcaaaaaccacacctttgaaagctacaccaacaaaaaatggggtgaagagg aaacatagtgacacaggaaatggagagataactccatccaaaaagtcaaagccaatgtgc aagtatggagcagattgctaccagaccaaccctacacatctggaacagtttgaccatcct cctaagactcttccaaatgtattcagaggttgcaaaattttcctgccaacagacaccaaa ttgtacaggacacttagaagatacatcattggttgggatggtgaattggttcctgagtat gataaggcttcagcgacccatgtgatattggacaaaggctacaaaggtgacatagttaag tgtgcaggggtgtgtttaaccttggactggattaagatgtgtataaagaagaaaatgttg gtcaggactgacccctatctagtgggtgatgactacgagtga

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