Crassostrea gigas (Pacific oyster): 105339441
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Entry
105339441 CDS
T03920
Name
(RefSeq) thyroid hormone receptor beta-A
KO
K08362
thyroid hormone receptor beta
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105339441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105339441
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105339441
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105339441
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
105339441
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105339441
NCBI-ProteinID:
XP_011443300
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Position
LG7:complement(57002736..57017173)
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AA seq
479 aa
AA seq
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MDIRLGCDKNEFVDGMNRGYMPYFPPAMIQHSQTSSFVLPEYKQVLPQRSSQREESSNED
GTAHYSGLSAMSKPSPENSMPSPSSATSSSSPASSQASSDAGGSDGAGGNKRKGTPYIPS
YMDLTNGPEPCVVCGDAATGYHYRCMTCEGCKGFFRRTIQKNLQYHCKWNKMCSIDKNSR
NQCQECRFRKCLNVGMATDLVLNEKQRKAKRKLIEENREKRKQDNVKVKPKPTEACNHDS
LTETDKTIITEVTSAYEQTAVKVPLKEPVSQDDLISSDPEAWQQLAEAMTPSIVKVVEFA
KNVPGFIQLFVDDQILLLKSCCMEIMCLRAACRYDPEKETITMHNGVCLHKSQLKSEGLG
LLVEPIFEFAVGLSKLKLDKTELALLAAVLLMQSDRSGLKEPEGVEKLQDSILGAFKRYI
ATKRPHQPVHWAKILMKVTDLRTISTRHAERVLCIRLDHQGDIPPQLLDLFNEGQTYYS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggacattcgtttgggttgtgacaaaaatgagtttgttgacggaatgaatcgaggatac
atgccatactttccgcctgccatgatccaacattcgcagacatcatcgttcgttttaccg
gagtacaagcaagtgttaccacagagatcctctcagagggaggaaagtagcaatgaagat
gggacagctcactactccggtctttctgctatgtccaaacccagtccggaaaactccatg
ccctccccatccagcgcgacgtcatcttcatcgccggcgtcgtcacaagcctcgtctgac
gccgggggtagtgacggtgccggggggaataagagaaaaggaacgccgtacatcccgagt
tatatggacctgaccaatggaccagaaccttgtgttgtgtgtggcgacgccgccactggc
taccactatcgctgtatgacctgcgaaggttgcaagggatttttccgccgcactatacag
aaaaacctccagtaccattgcaagtggaacaaaatgtgttcgatcgataagaattctcgt
aaccagtgccaagagtgtagatttagaaaatgcttaaatgttggcatggcaacggatctt
gtattaaatgagaagcaaaggaaagctaagagaaaactgatagaagaaaacagagaaaaa
cgaaaacaagacaacgttaaagttaaaccgaaacctacggaggcatgtaaccatgatagc
ctgacagaaaccgacaaaacaatcataacggaagtgacgtcagcgtatgaacagactgct
gtcaaagtgccactcaaagaacccgttagccaggatgacttaatttcctccgaccccgaa
gcttggcagcagttggcagaagccatgacaccctctattgtaaaggttgtggagtttgcc
aaaaacgtaccgggatttatccaattgttcgtggacgaccaaatcctgttgctgaagtct
tgttgcatggagatcatgtgtctacgagcagcctgccggtacgacccagaaaaggagacc
atcactatgcataatggcgtctgtctacacaaatcacagctcaaatcggaggggctgggc
cttcttgtcgaaccaatatttgagttcgctgttggtttgtccaaactgaagttggacaaa
acagaacttgcgttgcttgcagctgtgttgttgatgcaatcagatcgctcagggttaaag
gaaccggaaggtgtggagaaactccaggattccattctcggagcgtttaagcgttacata
gcaaccaagcgcccgcaccagcccgtacactgggcaaagattctgatgaaagtgacagac
ctccgtactatcagcacccgccatgccgagcgtgttttgtgtatccggcttgatcaccaa
ggtgatattcctccgcagctcctggacttgtttaacgagggacagacatattatagctga
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