Magallana gigas (Pacific oyster): 105343095
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Entry
105343095 CDS
T03920
Name
(RefSeq) short stature homeobox protein 2
KO
K09331
short stature homeobox protein
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105343095
Transcription factors [BR:
crg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
105343095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
Motif
Other DBs
NCBI-GeneID:
105343095
NCBI-ProteinID:
XP_011448594
UniProt:
K1R7X3
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Position
LG4:29795996..29807468
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AA seq
274 aa
AA seq
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MEGLTEFVSKSFVKDSVTNLSESLGSLPCKVEEEYESSPEPTDLRIRKRSESPEIRSSKN
DDPQQPSSPPKTETIDCSEDSDNESAVIERHATSSSGEERDHPKLKQRRSRTNFTLEQLN
ELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQESQMQKAGLLIQAQG
TPLDACRMTPYVTMPPIREPVERLPPISPFLPYYSLHNPGHAHQPIHPLLLYHHHYAAAL
NYASLHDTSLKSNKNSSIADLRLKARQHLASLGI
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggagggattaacagaattcgtgtcaaaatcttttgttaaagacagcgtgacaaattta
tcggagtcgttgggatctttaccttgtaaggtagaggaagaatatgagtcttcaccggaa
cccaccgacctgaggatccgaaaaaggagtgagagcccagagattaggtcctcgaaaaac
gacgacccacaacaacccagctcaccccccaaaacggaaaccatcgactgctcagaggac
tcggacaacgaatctgctgtgattgaacgacacgcaacttccagttccggtgaagagagg
gaccacccaaagctaaaacagaggagaagtcgtacgaactttaccctggaacaactgaac
gagctggagagactctttgatgagactcattatccagatgctttcatgagagaggaactc
agccaaagactgggattatcggaggccagagtgcaagtttggtttcagaacagaagagcg
aaatgcagaaaacaagaaagtcaaatgcaaaaagcgggattacttatccaagcccaaggt
accccactggatgcctgtagaatgaccccttacgtcacaatgcctcctattcgcgagcca
gtggagcgcttgccgccaatatcgccatttttaccgtattactcacttcacaatcctggg
catgcgcaccagcctatccaccctttgctcctctatcatcaccactacgccgccgcccta
aattacgcttccttgcacgacaccagcttgaagtcaaacaaaaactctagcatagcggat
ctaaggctgaaagctagacaacatctagcgtcccttggtatttaa
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