Crassostrea gigas (Pacific oyster): 105344771
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Entry
105344771 CDS
T03920
Name
(RefSeq) neurogenic locus notch homolog protein 1-like
Organism
crg
Crassostrea gigas (Pacific oyster)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
EGF_3
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
105344771
NCBI-ProteinID:
XP_011450945
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Position
LG8:complement(44582742..44589929)
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AA seq
1373 aa
AA seq
DB search
MAGLFRNVLVLIMCLSRIDGKITVLFHIDEVGNSGNRVKGGDCCQGVTGSCSELCKPVLT
LCIEKDNACETSAITTVNLKTNDQKFGSHIGNMSNPLYLEIDSWNKYRDKFRIFVHDLRP
TTDSPLVFETLFSDFNVEVGANEVSDGWRAKTLQSSYISHRNAFRLHVTYKLYCSPGFYG
AACNITCPGNPNKCVQDGKTYCKTGWTGANCDQDIVECNDPNFCHGGRCTNQIGGFFCEC
PQSRSGIQCRMDEDECFFEPCNGGLCLNTLGSFSCSCPGGTTGKTCDTLMTSQCSNSTCH
NHGVCKTSSDGNTTTVNCNCEFGYMGADCRFRDYCSIHGCVNGGTCVNTANSSFCVCQEG
FSGKDCELHDYCSSSPCNHLGKCSNIYNGFQCDCTPGYSGVTCDVRDFCQNQKCNGHGEC
FNGQNGFHCECEAGFIGKECEQHDFCFNFTCPISQKCVTEKSGHSCVCPGGLTGEKCDKL
DRCYFDPCHGHGLCTNTDSGYTCNCDGGWKMNDCSKRDYCYGDPCTHGNCTDLFNTFQCS
CEVGWVGQQCNNTDYCLSDPCFQNGTCMNNIDTFSCLCPLGWTGKRCELKDTCLSTPCHN
NGSCTVDKKGITCTCASGWTGPTCNEVDYCYGDPCRNNGTCVNGLTGYFCQCPSRFTGSN
CETDACLNQTCSGQGTCRASRDGFVCDCFDDFVGLLCESKNPCKAYSCFNGGNCTVVKHD
NLSISYNYTAACVCPNTWKGSRCENDVDECHVKSTCGRHGHCSNSKGDFTCFCDPGYEGK
HCESDINECASMPCKNNGTCENRVGNFLCRCSQYWTGTYCDQDIDECKYHPCENQGTCQN
LLGNYSCTCDKFWTGRHCEKHIDACHAQPCKNGATCIDLDTTFYCKCDSRFTGRHCDVDV
NECQSQHPCRNGGSCINTEGGFHCNCTSYWEGEQCENDVDECSSNVCPNGTACVNKQLGY
ECQDCSLYSCYHHGTCIDSPTSGPKCICPKDWTGDHCEQRDFCRFDPCGPLQLCKNTEHA
YICDYHPCLSSPCHNNGTCVEIRSDIRCDCPRGWMGELCQVRDYCASSPCDHNGTCVNLA
DGFKCTCQPDWLGRTCSIFDYCYSKPCLNDGVCANRPDTYQCLCHQQWMGKSCELRNYCS
EMPCENRGICTNTNSTYNCLCSNEWISQNCSVYNYCFNNPCTNGATCINMQSDFNCTCPL
GYTGRHCEIAIDYCASSPCQNNGTCVNSPYGYFCTCAAGYVGHNCERDLDECKIDMCPAR
STCFNYEGGYTCIWTAQRARMKRGLLKNKDNALLKVTIPSIKNKESSEKFLSLLQNMFDL
KVCSRKSTIIPVLYDVNHTSGKIDFLFKALCENEDVSKLDFEKTLRSYDLMIT
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtctcttccgaaatgtcctggttttgataatgtgtttatcacggattgacgga
aaaatcaccgtccttttccacattgacgaggtaggtaactcgggaaaccgggtaaaggga
ggcgactgctgccagggcgtcaccggaagctgctcagagctgtgtaagccagtcctcact
ctctgtatcgaaaaagacaatgcctgtgaaacgtcagctattacaacggtgaatcttaaa
accaatgatcagaaatttggctcacatattggaaatatgtcgaatcctttatacctagaa
atagactcttggaataaataccgggataagtttcggatatttgtccacgacttgaggccg
actaccgactcccctcttgttttcgagactctgttttcggatttcaatgttgaggttgga
gctaacgaagtcagcgatggatggagagccaagacactgcaatccagttatatctcccac
cgtaacgcctttagattacacgtgacatacaaactttactgttctccgggattttatggg
gctgcttgtaacatcacgtgtccaggaaaccccaataagtgtgtacaagatggcaagacc
tactgcaaaacaggatggacaggagcaaactgcgatcaagacatcgtcgagtgtaatgat
cccaacttctgtcatggcggacgttgcaccaatcagataggtggtttcttttgcgagtgc
ccacaaagtcggtctggtatacagtgtagaatggacgaagacgaatgtttcttcgaacct
tgtaatggcggcttgtgtctcaatacacttggttccttttcttgttcgtgtccgggcggc
acaaccgggaaaacttgtgacacccttatgacatctcagtgttccaactccacgtgtcat
aatcatggagtctgcaagacatcgtccgatggtaacaccacaaccgtgaattgtaactgc
gagtttggatacatgggagcagactgtagatttcgagactactgtagcattcatggttgc
gttaatggtggtacgtgtgtgaatacagccaattcgtccttctgtgtctgtcaggaagga
ttctctggaaaagactgtgaactacatgactattgttctagctccccttgtaaccacttg
ggaaagtgttcaaatatctacaatggattccaatgcgactgcaccccaggatactcggga
gtcacttgcgatgtccgagatttttgccaaaaccagaaatgtaatggacatggggaatgt
ttcaatggtcaaaatggtttccattgtgagtgtgaagccggctttattggcaaagaatgt
gagcagcacgatttctgtttcaactttacatgtcctatttctcagaaatgtgtcactgag
aaaagtggacactcctgcgtctgtccaggtgggctaacaggggagaaatgtgacaagtta
gaccgatgttactttgacccctgccatggtcacggtctgtgtaccaacactgactctgga
tatacttgtaactgtgacggtgggtggaaaatgaatgactgcagcaagagggattattgc
tatggggatccatgcactcatggaaactgtacggatcttttcaatacatttcaatgttcc
tgcgaggtgggatgggttggtcagcaatgtaacaacactgactactgcttgagtgatcca
tgttttcaaaatggtacttgtatgaataacatagatacattcagttgtctgtgtcctctg
ggatggactgggaaaagatgcgagcttaaagatacttgtctgagtactccatgtcataac
aatggcagttgtactgtcgataagaaagggataacatgtacttgtgcatcaggatggacc
ggtccaacctgcaatgaggttgactactgctatggagacccttgtaggaacaatggtacc
tgtgtgaatggtctgactggttatttttgccagtgtccatcacgttttactggatcgaat
tgtgagactgatgcctgtttgaatcagacatgtagcggacaggggacttgccgagcttcc
cgagatgggtttgtttgcgattgtttcgacgactttgtaggattactctgtgaaagcaag
aatccttgtaaagcgtactcttgtttcaacggagggaattgcaccgtggtaaaacatgat
aatttgtctatatcatataactatactgccgcatgtgtttgtccgaacacgtggaaggga
agtaggtgcgagaacgatgttgatgaatgtcatgtaaaatcaacatgtgggagacatgga
cactgctcaaatagtaaaggagatttcacgtgcttctgtgatcctggatacgaagggaaa
cactgtgaaagcgacatcaacgaatgtgcctccatgccgtgtaaaaataatgggacttgt
gagaatcgggtcgggaacttcctctgtcgatgcagtcagtactggacagggacctactgt
gaccaagacatagacgaatgcaaatatcatccatgtgaaaaccagggaacgtgtcaaaat
cttttaggaaactactcttgtacctgcgataaattttggacgggaagacactgcgaaaag
cacatagacgcatgtcatgcccagccctgcaaaaacggtgcgacgtgcatagatttagac
acaactttctattgcaaatgtgattctcgatttacaggacgccattgtgatgtcgatgtt
aacgaatgccaatcacaacatccatgtcggaatggtggatcgtgtataaatacggaggga
ggattccactgcaactgtacgtcatactgggaaggagagcaatgtgaaaatgacgtggat
gagtgttcctccaatgtttgtcctaacggcacggcgtgtgtgaataaacagctcggctac
gaatgtcaagattgttctctgtattcttgttatcaccatggaacatgtatagattccccc
acttcaggtccaaaatgcatctgtcctaaagactggacgggagatcactgcgaacagaga
gatttctgtcgctttgatccgtgcggtcccttgcagctctgtaagaatacagaacacgct
tatatttgtgactaccatccatgtctgagttcaccgtgccataacaatggaacatgtgtg
gaaatccgaagtgatattcgatgtgactgtccgagaggttggatgggtgaattgtgtcag
gtgcgagattactgcgcaagcagcccgtgtgaccacaatggtacctgtgtaaatcttgca
gatggtttcaagtgcacctgtcagcctgattggctcgggcgcacctgttcgatctttgat
tactgctattctaaaccatgtttgaacgacggagtttgcgcaaacagacctgacacatac
cagtgcttgtgccaccagcagtggatggggaaaagctgtgaattaagaaattattgtagt
gaaatgccttgcgaaaatcggggtatttgtaccaacacgaactccacgtacaactgtctg
tgttcaaatgaatggataagtcagaattgctcggtttataactattgttttaacaatcca
tgtacgaacggtgcgacctgcatcaacatgcagtctgacttcaactgcacttgtcctctt
ggctatacagggcgacactgtgaaatcgccatagactattgtgcttcgtcgccatgtcaa
aacaacggaacatgtgttaattcaccttacggatacttttgcacatgcgcagcgggttat
gttggacacaactgcgaaagagatttagatgaatgtaagatcgacatgtgtcccgcaagg
tcaacttgttttaactatgaaggggggtacacgtgcatttggactgcacaaagggcaaga
atgaaacggggattgctcaaaaacaaagataatgcacttttaaaagtcacaattccatct
ataaagaacaaggaaagttctgagaagttcctgagccttttgcagaatatgttcgattta
aaagtgtgctcaagaaagtcaacaatcattccagttctttatgacgtgaatcacacatct
gggaagattgattttctgtttaaagctttgtgtgaaaatgaagatgtcagtaaattggat
tttgaaaagacattgagaagctatgatttaatgatcacttaa
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