Magallana gigas (Pacific oyster): 105345645
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Entry
105345645 CDS
T03920
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105345645
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105345645
Membrane trafficking [BR:
crg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
105345645
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
105345645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Coatomer_WDAD
WD40
NBCH_WD40
BBS2_Mid
Nup160
Clathrin
WD40_2
Motif
Other DBs
NCBI-GeneID:
105345645
NCBI-ProteinID:
XP_034336383
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All DBs
Position
LG6:54348903..54362598
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AA seq
942 aa
AA seq
DB search
MPLRLDIKRKLSARSDRVKSVDLHPTEPWMLASLYNGNVHVWNHESQQLIKSFEVCDLPV
RCSRFVPRKNWVITGSDDMQIRVFNYNTLERVHQFEAHSDYIRSIAVHPTQPFILSSSDD
MLIKLWDWDKKWACNQVFEGHSHYVMQIVINPKDNNTFASASLDRTVKVWNLGSNTPNFT
LEGHEKGVNCVDYYSGGDKPYLISGADDRLIKIWDYQNKTCVQTLEGHAQNISAVAFHPE
LPIIMTGSEDGTVRIWHANTYRLESTLNYGLERVWAIAAQKGSNNVALGYDEGSIIIKLG
REEPAMSMDSSGKIIWAKHSEIQQANIKAIGDQDVKDGERLPLAVKDMGSCEIYPQTVAH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWGSDSSVYATRESTSSVKIFKNFKE
QKAFKPEFGAEGIYGGFLLGTRSVSGLAFYDWESTELIRRIEITPKNVYWSENGELCCIT
TDESFFVLKYNPEAVEKAQGNREEIGEDGIEEAFDVVGEIDETVKTGVWVGDCFIYTNSV
NRLNYYVGGEIVTIAHLDRMMYLLGYIPKDNRLYLGDKELNIVSFSLLVSVLEYQTAVMR
RDFETADKILPMISKEHRSRVAHFLEKQGFKSQALAVTCDPEHKFELAIQLGDLKTCYQI
AKEAESEQKWKQLAELAISKCEFGLAQECLHQASDFGGLLLLASSAGNAQMVAKLGDTAQ
KAGQNNVAFVSHFVLGRLEECLEVLINTGRLPEAAFFARTYLPSQVSRVVELWREHLAKV
NKKAANSLAEPQEYENLFPDWKNALKTEAYLKPQRQRAIPADKFPRVPPNHERVPVDEMQ
QAEEQGSFTFVRGPGDDDDDDAGDDFEQAPDTTEQSVRAPSPLPQKKETAPPDPAPSKTE
MDDIEKELELDLENMNIDNVDTSDLPSADQDINLDEEDLLED
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcgacttgatatcaagcggaaattatcagcacggtccgatcgagttaagagt
gtagatttacatcccacagaaccatggatgttggcaagtttatacaatgggaatgtccat
gtgtggaatcatgagtcccagcaacttatcaaatcgtttgaggtttgcgatttacctgta
agatgttccagatttgttcccagaaaaaactgggtcatcaccggctcagatgacatgcaa
atccgagtgtttaactacaacacgctggagcgagtccaccagttcgaggctcactcagat
tacatcagaagcattgctgtccaccccacccagccattcatcctcagcagcagtgatgac
atgctgatcaagctgtgggactgggacaagaagtgggcctgtaaccaggtgtttgaggga
cactcccactatgtcatgcagatcgtcatcaaccccaaagacaataacaccttcgccagt
gcctcactggaccgaacagtcaaggtttggaatctgggatcaaacacacctaattttact
ctggagggacatgaaaagggagtgaattgtgtagactactattcagggggagacaaacct
tacttgatctctggagctgatgacagacttatcaaaatctgggattaccagaacaagacc
tgtgtgcagactttggagggacacgcccagaacatctcagctgtggctttccaccctgag
ctccccatcataatgaccggctcagaggatggtacagtaagaatctggcatgccaacaca
taccgactggaaagcacgctgaattatgggctggaaagggtgtgggccattgctgcccag
aaaggctccaataatgttgctctgggttatgatgaaggaagcatcattattaagcttggc
cgagaggaaccagccatgtcaatggacagcagtggaaagatcatctgggccaaacactcg
gagatacagcaggccaacatcaaggctattggagaccaggacgtgaaggatggagagagg
ctccctctggcggtgaaggacatgggcagctgtgagatctacccccagacagttgcccac
aaccccaatggcaggtttgtggtggtgtgtggggatggcgagtacatcatctacacggcc
atggctctcaggaacaagagttttggctctgcccaggagtttgtttggggcagtgattct
tcagtgtacgccaccagagaatccaccagttcagttaaaatcttcaaaaacttcaaggaa
caaaaggcattcaaaccagaatttggggctgaaggtatatatggaggattcctattgggc
acacggtcagtgagtggcctggcattttatgactgggaatccacagagctcatacgacga
atagaaataacaccaaaaaacgtgtactggagtgagaatggagagctgtgttgtatcact
acagacgagtcgttctttgtcctaaaatacaacccggaggccgtggaaaaagcccagggc
aatagggaagagatcggagaggacgggattgaggaagcgtttgatgtggtgggagagatt
gatgagacggtgaagactggtgtgtgggtgggagactgcttcatctacaccaatagtgtc
aaccggctcaactactacgtgggcggggaaatcgtcacaatagctcacctggatagaatg
atgtatttgcttggttacattccaaaagacaatcgcctgtacctcggagacaaggaactc
aacattgtcagtttctcactcctcgtctcggtgctggagtaccagacagctgtcatgaga
agagactttgaaaccgcagataaaatattaccaatgatttctaaagaacacagatcaagg
gttgcccatttcctggagaaacagggctttaaatcccaagcgttagctgtgacatgtgac
ccagaacacaagtttgagctggccatacaattaggagatcttaaaacctgctatcagatc
gccaaagaagcagagtcagagcagaagtggaagcagcttgcagagcttgcgatcagcaag
tgtgagtttggtcttgcccaggagtgcctccatcaagccagtgactttgggggtctcctg
ctgctggccagctctgctgggaacgcccagatggtggccaagctcggggacacggctcaa
aaagccggccagaacaacgtcgccttcgtctcacactttgtccttggaagactagaggag
tgcctggaggtgttaattaacacaggacgtcttccggaggccgccttcttcgccagaaca
taccttcctagtcaagtctcaagagtggtggagttgtggagagagcatttagcaaaagtc
aacaagaaggccgccaactctttggctgagccccaggaatatgagaacttgttcccagac
tggaagaatgccctcaagaccgaggcttatctcaaaccacagaggcagcgtgcaatcccg
gcggacaaattcccacgtgtcccaccaaatcacgagagggtccctgtggatgagatgcag
caggccgaggagcagggctcgttcacattcgtccgcggaccaggcgatgatgatgatgat
gatgcaggggacgactttgaacaggcccccgacacgactgaacaaagtgtcagggcgccc
tctcccctaccacagaagaaggaaacggcacccccagatcctgccccgagtaaaacagaa
atggatgacatagagaaggagttggagttagatctagaaaacatgaacattgacaatgtg
gacacctcagacctcccttctgctgaccaggacattaatttggatgaggaggaccttttg
gaagattaa
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