KEGG   Crassostrea gigas (Pacific oyster): 105347138
Entry
105347138         CDS       T03920                                 
Name
(RefSeq) vitamin D3 receptor B isoform X4
  KO
K08538  farnesoid X receptor beta
Organism
crg  Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:crg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:crg03000]
    105347138
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:crg03310]
    105347138
Transcription factors [BR:crg03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    105347138
Nuclear receptors [BR:crg03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   105347138
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 105347138
NCBI-ProteinID: XP_011454352
UniProt: K1PW47
LinkDB
Position
LG7:complement(59095042..59139481)
AA seq 517 aa
MKYFFEMENSYIMECDQKSPDSSAGASMTFQKKDKTCLVCGDKALGYNFNAVSCESCKAF
FRRNAHKVIRGRCEGRCDITVESRSFCKKCRLAKCFTVGMRKDMILNDEQKQVRKQKIII
NKLRKHGQLPPEDTYAASRQDVNDSLQDSIRSQNLHNLRMSFPNLSDKELDVLMKMKVEQ
YPEGKDSSSELKYPSWSESQGIVADILANLPEIDQCILNELRIAHEQSSFLANTTTSLKA
PPTNATEFVNLAEGFVRRIIKVAKNIEFFKMICKEDQIALLKGSVVEIMMLRSAINYNVE
TESWSFSTMKCLSKPPGPSTSSESGSGQSHPGHLSQTDLTNRPFSKGMEAFSGAGQMGGL
PNEEEMKRLREMMSSRIKAEEGVKSEVGAVSASILKAGGSETYNMFLTYSKFIKSLMRTI
HGDLLALKLLIMLSLFSADRQGVLEHDKIQQIQECYAGILQKYVERRFPEDKIMFAKIVM
KLTDLRNINEVHTKMLLKMKVDSIEPLLIEIFDLPNE
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgaagtactttttcgagatggagaactcttacatcatggaatgtgaccagaagagtcct
gattcctcagcgggggcatccatgaccttccagaagaaggacaagacatgtctggtctgt
ggggacaaggcgctgggctacaacttcaacgctgtctcctgcgagtcctgcaaagcattt
ttccgcaggaatgcacacaaggtgattcgtgggcgatgtgagggcagatgtgacatcaca
gtcgaatccaggtccttctgcaagaaatgccgcttggccaagtgctttactgtaggcatg
agaaaagacatgatattaaatgatgagcagaaacaagtaagaaagcagaaaatcattata
aacaaattacgtaaacatgggcagcttccaccagaagacacttacgctgcctcaagacaa
gacgtcaatgattccttgcaggatagcattcgttcacagaatctccataacctgcgaatg
tcctttccaaacttatcagacaaagaactcgacgttcttatgaaaatgaaggtggaacaa
tacccagagggaaaagattcttcgtcagagctcaaatatccaagttggagtgaatcccag
ggaatcgtggcagacatcttggctaacttaccagagattgaccagtgtatactcaatgag
ttgaggattgcacatgaacagagttcctttctggccaacacaacaacttccttaaaagct
ccacccacaaatgctacagagtttgtgaacttagctgaaggttttgtgaggagaattatc
aaggtggcaaaaaacattgaattctttaaaatgatctgtaaagaagaccagatagccctc
ttgaagggttctgttgtggagattatgatgttgagatcggcgataaactacaacgttgag
acggagtcatggagcttcagcaccatgaagtgtttgtccaaacctccaggcccctcaaca
agttctgaatcagggtctgggcaatcccatccagggcatttgtcccagacagatctaaca
aatcgacctttttctaaaggaatggaagcatttagtggggctggtcaaatggggggactt
cccaatgaagaggaaatgaaaagactgagagaaatgatgagttctcgcatcaaagcagag
gaaggagtgaaaagtgaagtgggggctgtcagcgccagtattctcaaagctggaggctca
gaaacttacaacatgttcttgacttattccaagttcatcaagtctctaatgcggacaatt
catggagatttgttggcactgaagcttctgatcatgttgtctctgttctcggcggacagg
cagggtgttctagaacatgacaagattcagcagatacaagagtgttatgctggaatccta
caaaaatacgtagagagaagatttccggaggataaaatcatgtttgccaaaattgttatg
aaactgactgatcttcgaaatattaacgaagtgcatacaaaaatgttgctcaaaatgaag
gtggacagtatagaacctttgttgatagagatattcgatttgccaaacgagtga

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